RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 KRT13P13646 458 aa20.95■□□□□ 0.94
PDLIM1-202ENST00000477757 NR2F2P24468 414 aa20.95■□□□□ 0.94
PDLIM1-202ENST00000477757 GTF2H1P32780 548 aa20.95■□□□□ 0.94
PDLIM1-202ENST00000477757 DAOAP59103 153 aa20.95■□□□□ 0.94
PDLIM1-202ENST00000477757 ECT2LQ008S8 904 aa20.95■□□□□ 0.94
PDLIM1-202ENST00000477757 NFIL3Q16649 462 aa20.95■□□□□ 0.94
PDLIM1-202ENST00000477757 HS1BP3Q53T59 392 aa20.95■□□□□ 0.94
PDLIM1-202ENST00000477757 KRT39Q6A163 491 aa20.95■□□□□ 0.94
PDLIM1-202ENST00000477757 FAM186BQ8IYM0 893 aa20.95■□□□□ 0.94
PDLIM1-202ENST00000477757 CARNMT1Q8N4J0 409 aa20.95■□□□□ 0.94
PDLIM1-202ENST00000477757 KCTD13Q8WZ19 329 aa20.95■□□□□ 0.94
PDLIM1-202ENST00000477757 PTPRN2Q92932 1015 aa20.95■□□□□ 0.94
PDLIM1-202ENST00000477757 ZNF396Q96N95 335 aaPredicted RBP20.95■□□□□ 0.94
PDLIM1-202ENST00000477757 DDX50Q9BQ39 737 aaKnown RBP20.95■□□□□ 0.94
PDLIM1-202ENST00000477757 HESX1Q9UBX0 185 aa20.95■□□□□ 0.94
PDLIM1-202ENST00000477757 SLCO3A1Q9UIG8 710 aa20.95■□□□□ 0.94
PDLIM1-202ENST00000477757 PLRG1O43660 514 aaKnown RBP20.94■□□□□ 0.94
PDLIM1-202ENST00000477757 LZTS3O60299 673 aaPredicted RBP20.94■□□□□ 0.94
PDLIM1-202ENST00000477757 RTN2O75298 545 aa20.94■□□□□ 0.94
PDLIM1-202ENST00000477757 CSO75390 466 aaKnown RBP20.94■□□□□ 0.94
PDLIM1-202ENST00000477757 MOCS3O95396 460 aa20.94■□□□□ 0.94
PDLIM1-202ENST00000477757 DGKAP23743 735 aa20.94■□□□□ 0.94
PDLIM1-202ENST00000477757 MAT2AP31153 395 aaKnown RBP20.94■□□□□ 0.94
PDLIM1-202ENST00000477757 METAP1P53582 386 aa20.94■□□□□ 0.94
PDLIM1-202ENST00000477757 TBX4P57082 545 aa20.94■□□□□ 0.94
PDLIM1-202ENST00000477757 RNF219Q5W0B1 726 aaPredicted RBP20.94■□□□□ 0.94
PDLIM1-202ENST00000477757 IGF2-ASQ6U949 168 aa20.94■□□□□ 0.94
PDLIM1-202ENST00000477757 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.94■□□□□ 0.94
PDLIM1-202ENST00000477757 CCDC117Q8IWD4 279 aaPredicted RBP20.94■□□□□ 0.94
PDLIM1-202ENST00000477757 CEP57L1Q8IYX8 460 aa20.94■□□□□ 0.94
PDLIM1-202ENST00000477757 VCPIP1Q96JH7 1222 aa20.94■□□□□ 0.94
PDLIM1-202ENST00000477757 FAM13BQ9NYF5 915 aa20.94■□□□□ 0.94
PDLIM1-202ENST00000477757 CEP83Q9Y592 693 aa20.94■□□□□ 0.94
PDLIM1-202ENST00000477757 COL12A1Q99715 3063 aa20.93■□□□□ 0.94
PDLIM1-202ENST00000477757 PRAMEF26H0Y7S4 382 aa20.93■□□□□ 0.94
PDLIM1-202ENST00000477757 LUC7L3O95232 432 aaKnown RBP20.93■□□□□ 0.94
PDLIM1-202ENST00000477757 GP1BAP07359 652 aa20.93■□□□□ 0.94
PDLIM1-202ENST00000477757 SETSIPP0DME0 302 aa20.93■□□□□ 0.94
PDLIM1-202ENST00000477757 STAT4Q14765 748 aa20.93■□□□□ 0.94
PDLIM1-202ENST00000477757 SETMARQ53H47 684 aaPredicted RBP20.93■□□□□ 0.94
PDLIM1-202ENST00000477757 SGO2Q562F6 1265 aa20.93■□□□□ 0.94
PDLIM1-202ENST00000477757 RESP18Q5W5W9 173 aa20.93■□□□□ 0.94
PDLIM1-202ENST00000477757 FBXL13Q8NEE6 735 aa20.93■□□□□ 0.94
PDLIM1-202ENST00000477757 SPAG5Q96R06 1193 aa20.93■□□□□ 0.94
PDLIM1-202ENST00000477757 NUCKS1Q9H1E3 243 aaKnown RBP20.93■□□□□ 0.94
PDLIM1-202ENST00000477757 UCKL1Q9NWZ5 548 aa20.93■□□□□ 0.94
PDLIM1-202ENST00000477757 FFAR2O15552 330 aa20.92■□□□□ 0.94
PDLIM1-202ENST00000477757 ACTN4O43707 911 aaKnown RBP20.92■□□□□ 0.94
PDLIM1-202ENST00000477757 STK19P49842 368 aaPredicted RBP20.92■□□□□ 0.94
PDLIM1-202ENST00000477757 MXI1P50539 228 aa20.92■□□□□ 0.94
PDLIM1-202ENST00000477757 MCCD1P59942 119 aaPredicted RBP20.92■□□□□ 0.94
PDLIM1-202ENST00000477757 MS4A13Q5J8X5 152 aa20.92■□□□□ 0.94
PDLIM1-202ENST00000477757 AGBL4Q5VU57 503 aa20.92■□□□□ 0.94
PDLIM1-202ENST00000477757 TMEM145Q8NBT3 493 aa20.92■□□□□ 0.94
PDLIM1-202ENST00000477757 IRGQQ8WZA9 623 aa20.92■□□□□ 0.94
PDLIM1-202ENST00000477757 INTS4Q96HW7 963 aaKnown RBP20.92■□□□□ 0.94
PDLIM1-202ENST00000477757 RPL10LQ96L21 214 aaKnown RBP20.92■□□□□ 0.94
PDLIM1-202ENST00000477757 FCRL2Q96LA5 508 aaPredicted RBP20.92■□□□□ 0.94
PDLIM1-202ENST00000477757 KLHL11Q9NVR0 708 aa20.92■□□□□ 0.94
PDLIM1-202ENST00000477757 RAB20Q9NX57 234 aa20.92■□□□□ 0.94
PDLIM1-202ENST00000477757 CA5BQ9Y2D0 317 aa20.92■□□□□ 0.94
PDLIM1-202ENST00000477757 K7ENP7 123 aa20.91■□□□□ 0.94
PDLIM1-202ENST00000477757 O00370 1275 aa20.91■□□□□ 0.94
PDLIM1-202ENST00000477757 GIMD1P0DJR0 217 aa20.91■□□□□ 0.94
PDLIM1-202ENST00000477757 VAV1P15498 845 aa20.91■□□□□ 0.94
PDLIM1-202ENST00000477757 PSMC2P35998 433 aaKnown RBP20.91■□□□□ 0.94
PDLIM1-202ENST00000477757 CSRP3P50461 194 aa20.91■□□□□ 0.94
PDLIM1-202ENST00000477757 SKOR1P84550 965 aa20.91■□□□□ 0.94
PDLIM1-202ENST00000477757 DCAF6Q58WW2 860 aa20.91■□□□□ 0.94
PDLIM1-202ENST00000477757 INO80CQ6PI98 192 aaPredicted RBP20.91■□□□□ 0.94
PDLIM1-202ENST00000477757 TMC6Q7Z403 805 aa20.91■□□□□ 0.94
PDLIM1-202ENST00000477757 DSG4Q86SJ6 1040 aa20.91■□□□□ 0.94
PDLIM1-202ENST00000477757 APCDD1Q8J025 514 aa20.91■□□□□ 0.94
PDLIM1-202ENST00000477757 UBA3Q8TBC4 463 aa20.91■□□□□ 0.94
PDLIM1-202ENST00000477757 KLHDC7BQ96G42 594 aa20.91■□□□□ 0.94
PDLIM1-202ENST00000477757 PAGE5Q96GU1 130 aa20.91■□□□□ 0.94
PDLIM1-202ENST00000477757 TJP2Q9UDY2 1190 aa20.91■□□□□ 0.94
PDLIM1-202ENST00000477757 SERTAD1Q9UHV2 236 aa20.91■□□□□ 0.94
PDLIM1-202ENST00000477757 RNGTTO60942 597 aaKnown RBP20.9■□□□□ 0.94
PDLIM1-202ENST00000477757 LTFP02788 710 aa20.9■□□□□ 0.94
PDLIM1-202ENST00000477757 LCP1P13796 627 aa20.9■□□□□ 0.94
PDLIM1-202ENST00000477757 CD19P15391 556 aa20.9■□□□□ 0.94
PDLIM1-202ENST00000477757 KCNMA1Q12791 1236 aa20.9■□□□□ 0.94
PDLIM1-202ENST00000477757 NNTQ13423 1086 aa20.9■□□□□ 0.94
PDLIM1-202ENST00000477757 CFAP52Q8N1V2 620 aa20.9■□□□□ 0.94
PDLIM1-202ENST00000477757 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.9■□□□□ 0.94
PDLIM1-202ENST00000477757 USP29Q9HBJ7 922 aa20.9■□□□□ 0.94
PDLIM1-202ENST00000477757 NLGN3Q9NZ94 848 aa20.9■□□□□ 0.94
PDLIM1-202ENST00000477757 PCDHA7Q9UN72 937 aa20.9■□□□□ 0.94
PDLIM1-202ENST00000477757 COL27A1Q8IZC6 1860 aaPredicted RBP20.9■□□□□ 0.94
PDLIM1-202ENST00000477757 LY6G6EA0A0G2JKS1 128 aa20.89■□□□□ 0.93
PDLIM1-202ENST00000477757 GABBR2O75899 941 aa20.89■□□□□ 0.93
PDLIM1-202ENST00000477757 PIAS2O75928 621 aa20.89■□□□□ 0.93
PDLIM1-202ENST00000477757 THEGLP0DJG4 465 aa20.89■□□□□ 0.93
PDLIM1-202ENST00000477757 ALPPL2P10696 532 aa20.89■□□□□ 0.93
PDLIM1-202ENST00000477757 NNMTP40261 264 aa20.89■□□□□ 0.93
PDLIM1-202ENST00000477757 ISXQ2M1V0 245 aa20.89■□□□□ 0.93
PDLIM1-202ENST00000477757 FAM46CQ5VWP2 391 aa20.89■□□□□ 0.93
PDLIM1-202ENST00000477757 KIAA1614Q5VZ46 1190 aa20.89■□□□□ 0.93
PDLIM1-202ENST00000477757 PRICKLE2Q7Z3G6 844 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms