RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 CYB5D2Q8WUJ1 264 aa16.32■□□□□ 0.2
COPS3-207ENST00000477299 CLDN23Q96B33 292 aa16.32■□□□□ 0.2
COPS3-207ENST00000477299 RNF25Q96BH1 459 aaPredicted RBP16.32■□□□□ 0.2
COPS3-207ENST00000477299 EPAS1Q99814 870 aa16.32■□□□□ 0.2
COPS3-207ENST00000477299 KLC2Q9H0B6 622 aa16.32■□□□□ 0.2
COPS3-207ENST00000477299 ACTL7AQ9Y615 435 aa16.32■□□□□ 0.2
COPS3-207ENST00000477299 TYW5A2RUC4 315 aaKnown RBP16.31■□□□□ 0.2
COPS3-207ENST00000477299 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.31■□□□□ 0.2
COPS3-207ENST00000477299 NRDCO43847 1150 aa16.31■□□□□ 0.2
COPS3-207ENST00000477299 ERCC2P18074 760 aa16.31■□□□□ 0.2
COPS3-207ENST00000477299 AOC1P19801 751 aa16.31■□□□□ 0.2
COPS3-207ENST00000477299 OR1E1P30953 314 aa16.31■□□□□ 0.2
COPS3-207ENST00000477299 TIE1P35590 1138 aa16.31■□□□□ 0.2
COPS3-207ENST00000477299 ACVRL1P37023 503 aa16.31■□□□□ 0.2
COPS3-207ENST00000477299 WASP42768 502 aa16.31■□□□□ 0.2
COPS3-207ENST00000477299 SLC1A1P43005 524 aa16.31■□□□□ 0.2
COPS3-207ENST00000477299 KIR2DL1P43626 348 aaPredicted RBP16.31■□□□□ 0.2
COPS3-207ENST00000477299 PITRM1Q5JRX3 1037 aa16.31■□□□□ 0.2
COPS3-207ENST00000477299 MBLAC2Q68D91 279 aa16.31■□□□□ 0.2
COPS3-207ENST00000477299 RFX8Q6ZV50 586 aa16.31■□□□□ 0.2
COPS3-207ENST00000477299 PSTKQ8IV42 348 aaKnown RBP16.31■□□□□ 0.2
COPS3-207ENST00000477299 C17orf53Q8N3J3 647 aaPredicted RBP16.31■□□□□ 0.2
COPS3-207ENST00000477299 CCDC33Q8N5R6 958 aa16.31■□□□□ 0.2
COPS3-207ENST00000477299 KCTD6Q8NC69 237 aa16.31■□□□□ 0.2
COPS3-207ENST00000477299 MSANTD3Q96H12 275 aa16.31■□□□□ 0.2
COPS3-207ENST00000477299 CSPG4P5Q96PW8 444 aa16.31■□□□□ 0.2
COPS3-207ENST00000477299 PSMB7Q99436 277 aa16.31■□□□□ 0.2
COPS3-207ENST00000477299 FEM1AQ9BSK4 669 aa16.31■□□□□ 0.2
COPS3-207ENST00000477299 TMEM248Q9NWD8 314 aa16.31■□□□□ 0.2
COPS3-207ENST00000477299 ELOVL2Q9NXB9 296 aa16.31■□□□□ 0.2
COPS3-207ENST00000477299 KIAA1522Q9P206 1035 aaPredicted RBP16.31■□□□□ 0.2
COPS3-207ENST00000477299 MRPS17Q9Y2R5 130 aaKnown RBP16.31■□□□□ 0.2
COPS3-207ENST00000477299 KRT86O43790 486 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 SNAP91O60641 907 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 RHOCP08134 193 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 KRT7P08729 469 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 HNRNPLP14866 589 aaKnown RBP eCLIP16.3■□□□□ 0.2
COPS3-207ENST00000477299 TNFRSF4P43489 277 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 KRT81Q14533 505 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 PLEKHG6Q3KR16 790 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 ZFYVE27Q5T4F4 411 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 TTC39BQ5VTQ0 682 aaPredicted RBP16.3■□□□□ 0.2
COPS3-207ENST00000477299 AADACL2Q6P093 401 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 MFSD7Q6UXD7 560 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 ZNF662Q6ZS27 426 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 BMP8AQ7Z5Y6 402 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 RHOT1Q8IXI2 618 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 FBXL6Q8N531 539 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 RNF10Q8N5U6 811 aaKnown RBP16.3■□□□□ 0.2
COPS3-207ENST00000477299 NPWQ8N729 165 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 ZNF366Q8N895 744 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 PCDH19Q8TAB3 1148 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 USP33Q8TEY7 942 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 ALG3Q92685 438 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 CELF6Q96J87 481 aaKnown RBP16.3■□□□□ 0.2
COPS3-207ENST00000477299 NELL2Q99435 816 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 HERPUD2Q9BSE4 406 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 CALN1Q9BXU9 219 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 CIPCQ9C0C6 399 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 MTG2Q9H4K7 406 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 LCMT1Q9UIC8 334 aa16.3■□□□□ 0.2
COPS3-207ENST00000477299 LRRD1A4D1F6 860 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 WASH4PA8MWX3 477 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 DCLK1O15075 740 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 DAPK3O43293 454 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 GPR37L1O60883 481 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 KRT1P04264 644 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 HCAR3P49019 387 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 STK19P49842 368 aaPredicted RBP16.29■□□□□ 0.2
COPS3-207ENST00000477299 PEX5P50542 639 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 GNA12Q03113 381 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 ADCY2Q08462 1091 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 PTPRNQ16849 979 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 ANKRD20A8PQ5CZ79 823 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 DGKKQ5KSL6 1271 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 FAM182AQ5T1J6 154 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 ACBD5Q5T8D3 534 aaPredicted RBP16.29■□□□□ 0.2
COPS3-207ENST00000477299 LRRC38Q5VT99 294 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 LEKR1Q6ZMV7 388 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 ALLCQ8N6M5 410 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 PQLC3Q8N755 202 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 RTL3Q8N8U3 475 aaKnown RBP16.29■□□□□ 0.2
COPS3-207ENST00000477299 RPLP0P6Q8NHW5 317 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 LRRN4Q8WUT4 740 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 RPL10LQ96L21 214 aaKnown RBP16.29■□□□□ 0.2
COPS3-207ENST00000477299 SPON2Q9BUD6 331 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 OSBPL6Q9BZF3 934 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 MUC3BQ9H195 1237 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 SLCO3A1Q9UIG8 710 aa16.29■□□□□ 0.2
COPS3-207ENST00000477299 CKAP5Q14008 2032 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 ZNF318Q5VUA4 2279 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 H3BRJ5 948 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 SGK1O00141 431 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 DDX3YO15523 660 aaKnown RBP16.28■□□□□ 0.2
COPS3-207ENST00000477299 ADAM23O75077 832 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 MAP3K6O95382 1288 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 KLF8O95600 359 aaPredicted RBP16.28■□□□□ 0.2
COPS3-207ENST00000477299 MT-CO1P00395 513 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 KRT10P13645 584 aa16.28■□□□□ 0.2
COPS3-207ENST00000477299 HLA-EP13747 358 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms