RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 CHD1LQ86WJ1 897 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 ARMC8Q8IUR7 673 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 BRSK2Q8IWQ3 736 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 RFWD2Q8NHY2 731 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 UCMAQ8WVF2 138 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 RUFY2Q8WXA3 655 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 SARAFQ96BY9 339 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 LBHD1Q9BQE6 289 aaPredicted RBP6.52□□□□□ -1.37
VPS50-212ENST00000476413 ABHD14AQ9BUJ0 271 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.52□□□□□ -1.37
VPS50-212ENST00000476413 NUAK2Q9H093 628 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 KLK15Q9H2R5 256 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 CPNE5Q9HCH3 593 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 OLA1Q9NTK5 396 aaKnown RBP6.52□□□□□ -1.37
VPS50-212ENST00000476413 TMEM248Q9NWD8 314 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 IRAK4Q9NWZ3 460 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 SWAP70Q9UH65 585 aa6.52□□□□□ -1.37
VPS50-212ENST00000476413 B8ZZF3 427 aa6.51□□□□□ -1.37
VPS50-212ENST00000476413 POC1B-GALNT4F8VUJ3 575 aa6.51□□□□□ -1.37
VPS50-212ENST00000476413 GUCY1B2O75343 617 aa6.51□□□□□ -1.37
VPS50-212ENST00000476413 C1QL1O75973 258 aa6.51□□□□□ -1.37
VPS50-212ENST00000476413 TACR2P21452 398 aa6.51□□□□□ -1.37
VPS50-212ENST00000476413 MTNR1AP48039 350 aa6.51□□□□□ -1.37
VPS50-212ENST00000476413 PTP4A2Q12974 167 aa6.51□□□□□ -1.37
VPS50-212ENST00000476413 ZNF766Q5HY98 468 aa6.51□□□□□ -1.37
VPS50-212ENST00000476413 MZT2BQ6NZ67 158 aa6.51□□□□□ -1.37
VPS50-212ENST00000476413 GJB7Q6PEY0 223 aa6.51□□□□□ -1.37
VPS50-212ENST00000476413 SERPINA13PQ6UXR4 307 aa6.51□□□□□ -1.37
VPS50-212ENST00000476413 R3HCC1LQ7Z5L2 792 aaKnown RBP6.51□□□□□ -1.37
VPS50-212ENST00000476413 RHPN2Q8IUC4 686 aa6.51□□□□□ -1.37
VPS50-212ENST00000476413 ANKRD52Q8NB46 1076 aa6.51□□□□□ -1.37
VPS50-212ENST00000476413 ADAMTS15Q8TE58 950 aa6.51□□□□□ -1.37
VPS50-212ENST00000476413 CHCHD6Q9BRQ6 235 aa6.51□□□□□ -1.37
VPS50-212ENST00000476413 INTS2Q9H0H0 1204 aaKnown RBP6.51□□□□□ -1.37
VPS50-212ENST00000476413 BEX4Q9NWD9 120 aaPredicted RBP6.51□□□□□ -1.37
VPS50-212ENST00000476413 DTX4Q9Y2E6 619 aa6.51□□□□□ -1.37
VPS50-212ENST00000476413 SCINQ9Y6U3 715 aa6.51□□□□□ -1.37
VPS50-212ENST00000476413 A0A087X1B8 175 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 GOLGA6L10A0A0M3HER8 536 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 TNPO2O14787 897 aaKnown RBP6.5□□□□□ -1.37
VPS50-212ENST00000476413 SYN3O14994 580 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 SGPL1O95470 568 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 HOXB9P17482 250 aaPredicted RBP6.5□□□□□ -1.37
VPS50-212ENST00000476413 EPHA8P29322 1005 aaPredicted RBP6.5□□□□□ -1.37
VPS50-212ENST00000476413 TYK2P29597 1187 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 GJC1P36383 396 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 GPD2P43304 727 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 CCR9P51686 369 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 AP5B1Q2VPB7 878 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 GLE1Q53GS7 698 aaKnown RBP6.5□□□□□ -1.37
VPS50-212ENST00000476413 FAM69AQ5T7M9 428 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 INO80CQ6PI98 192 aaPredicted RBP6.5□□□□□ -1.37
VPS50-212ENST00000476413 SLC30A9Q6PML9 568 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 OLFML1Q6UWY5 402 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 NEK10Q6ZWH5 1172 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 ADGRG6Q86SQ4 1221 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 MON1AQ86VX9 555 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 CHSY1Q86X52 802 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 PAQR4Q8N4S7 273 aaPredicted RBP6.5□□□□□ -1.37
VPS50-212ENST00000476413 AMER2Q8N7J2 671 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 OR52N4Q8NGI2 321 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 ZCCHC10Q8TBK6 192 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 CAGE1Q8TC20 777 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 ZNF398Q8TD17 642 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 EYA3Q99504 573 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 TM2D2Q9BX73 214 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 FRMD8Q9BZ67 464 aaPredicted RBP6.5□□□□□ -1.37
VPS50-212ENST00000476413 TRIM2Q9C040 744 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 Q9N2J8 555 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.5□□□□□ -1.37
VPS50-212ENST00000476413 ORC3Q9UBD5 711 aaPredicted RBP6.5□□□□□ -1.37
VPS50-212ENST00000476413 UPB1Q9UBR1 384 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 SUFUQ9UMX1 484 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 HS3ST3A1Q9Y663 406 aa6.5□□□□□ -1.37
VPS50-212ENST00000476413 PGPEP1LA6NFU8 196 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 GAGE10A6NGK3 116 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 URODP06132 367 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 LDHCP07864 332 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 C6P13671 934 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 RGS2P41220 211 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 RHAGQ02094 409 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 FOXD4Q12950 439 aaPredicted RBP6.49□□□□□ -1.37
VPS50-212ENST00000476413 KRT32Q14532 448 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 ANXA2RQ3ZCQ2 193 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 SLC22A25Q6T423 547 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 NME8Q8N427 588 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 ZNF366Q8N895 744 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 GPR150Q8NGU9 434 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 NFKBIDQ8NI38 313 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 ZFPM2Q8WW38 1151 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 RAB40AQ8WXH6 277 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 SH3KBP1Q96B97 665 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 FCRL5Q96RD9 977 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 CD180Q99467 661 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 DUSP26Q9BV47 211 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 SLC25A18Q9H1K4 315 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 TBC1D22BQ9NU19 505 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 ALKBH4Q9NXW9 302 aa6.49□□□□□ -1.37
VPS50-212ENST00000476413 ARPP21Q9UBL0 812 aaPredicted RBP6.49□□□□□ -1.37
VPS50-212ENST00000476413 SLC25A13Q9UJS0 675 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms