RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 TRIM68Q6AZZ1 485 aa17.03■□□□□ 0.32
TVP23B-202ENST00000476139 USP33Q8TEY7 942 aa17.03■□□□□ 0.32
TVP23B-202ENST00000476139 MFSD3Q96ES6 412 aa17.03■□□□□ 0.32
TVP23B-202ENST00000476139 AGAP2Q99490 1192 aa17.03■□□□□ 0.32
TVP23B-202ENST00000476139 ZFATQ9P243 1243 aa17.03■□□□□ 0.32
TVP23B-202ENST00000476139 PEX11AO75192 247 aa17.03■□□□□ 0.32
TVP23B-202ENST00000476139 ATP5HO75947 161 aa17.03■□□□□ 0.32
TVP23B-202ENST00000476139 GSRP00390 522 aa17.03■□□□□ 0.32
TVP23B-202ENST00000476139 POLBP06746 335 aa17.03■□□□□ 0.32
TVP23B-202ENST00000476139 NFKB1P19838 968 aa17.03■□□□□ 0.32
TVP23B-202ENST00000476139 SERPINB9P50453 376 aa17.03■□□□□ 0.32
TVP23B-202ENST00000476139 TEX44Q53QW1 395 aa17.03■□□□□ 0.32
TVP23B-202ENST00000476139 MARK2Q7KZI7 788 aaKnown RBP17.03■□□□□ 0.32
TVP23B-202ENST00000476139 RTN4RL1Q86UN2 441 aaPredicted RBP17.03■□□□□ 0.32
TVP23B-202ENST00000476139 ALYREFQ86V81 257 aaKnown RBP17.03■□□□□ 0.32
TVP23B-202ENST00000476139 KLHDC9Q8NEP7 349 aa17.03■□□□□ 0.32
TVP23B-202ENST00000476139 ZSCAN18Q8TBC5 510 aaPredicted RBP17.03■□□□□ 0.32
TVP23B-202ENST00000476139 CDKL2Q92772 493 aa17.03■□□□□ 0.32
TVP23B-202ENST00000476139 EPAS1Q99814 870 aa17.03■□□□□ 0.32
TVP23B-202ENST00000476139 MKI67P46013 3256 aaKnown RBP17.02■□□□□ 0.32
TVP23B-202ENST00000476139 CCDC78A2IDD5 438 aa17.02■□□□□ 0.32
TVP23B-202ENST00000476139 TMEM88BA6NKF7 163 aa17.02■□□□□ 0.32
TVP23B-202ENST00000476139 SKAP2O75563 359 aaPredicted RBP17.02■□□□□ 0.32
TVP23B-202ENST00000476139 AP2A1O95782 977 aa17.02■□□□□ 0.32
TVP23B-202ENST00000476139 ITGA2BP08514 1039 aa17.02■□□□□ 0.32
TVP23B-202ENST00000476139 GRIK1P39086 918 aa17.02■□□□□ 0.32
TVP23B-202ENST00000476139 ABCG1P45844 678 aa17.02■□□□□ 0.32
TVP23B-202ENST00000476139 ITGA7Q13683 1181 aa17.02■□□□□ 0.32
TVP23B-202ENST00000476139 PAXIP1Q6ZW49 1069 aaPredicted RBP17.02■□□□□ 0.32
TVP23B-202ENST00000476139 OTOP3Q7RTS5 596 aa17.02■□□□□ 0.32
TVP23B-202ENST00000476139 ZNF398Q8TD17 642 aa17.02■□□□□ 0.32
TVP23B-202ENST00000476139 CHRAC1Q9NRG0 131 aa17.02■□□□□ 0.32
TVP23B-202ENST00000476139 SIRPGQ9P1W8 387 aa17.02■□□□□ 0.32
TVP23B-202ENST00000476139 VANGL2Q9ULK5 521 aa17.02■□□□□ 0.32
TVP23B-202ENST00000476139 KLF11O14901 512 aa17.02■□□□□ 0.31
TVP23B-202ENST00000476139 HAUS5O94927 633 aa17.02■□□□□ 0.31
TVP23B-202ENST00000476139 UPP2O95045 317 aa17.02■□□□□ 0.31
TVP23B-202ENST00000476139 TM4SF4P48230 202 aa17.02■□□□□ 0.31
TVP23B-202ENST00000476139 PDE1BQ01064 536 aa17.02■□□□□ 0.31
TVP23B-202ENST00000476139 GALNT2Q10471 571 aa17.02■□□□□ 0.31
TVP23B-202ENST00000476139 GRIK3Q13003 919 aa17.02■□□□□ 0.31
TVP23B-202ENST00000476139 SDHAF4Q5VUM1 108 aa17.02■□□□□ 0.31
TVP23B-202ENST00000476139 KCTD11Q693B1 232 aa17.02■□□□□ 0.31
TVP23B-202ENST00000476139 TIFABQ6ZNK6 161 aa17.02■□□□□ 0.31
TVP23B-202ENST00000476139 RASSF3Q86WH2 238 aa17.02■□□□□ 0.31
TVP23B-202ENST00000476139 ARID3BQ8IVW6 561 aaPredicted RBP17.02■□□□□ 0.31
TVP23B-202ENST00000476139 HDAC11Q96DB2 347 aa17.02■□□□□ 0.31
TVP23B-202ENST00000476139 CERS2Q96G23 380 aa17.02■□□□□ 0.31
TVP23B-202ENST00000476139 ZNF419Q96HQ0 510 aaPredicted RBP17.02■□□□□ 0.31
TVP23B-202ENST00000476139 CADM1Q9BY67 442 aaKnown RBP17.02■□□□□ 0.31
TVP23B-202ENST00000476139 NDFIP2Q9NV92 336 aa17.02■□□□□ 0.31
TVP23B-202ENST00000476139 RNF186Q9NXI6 227 aa17.02■□□□□ 0.31
TVP23B-202ENST00000476139 EMCNQ9ULC0 261 aa17.02■□□□□ 0.31
TVP23B-202ENST00000476139 GOLGA8TH3BQL2 631 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 NCAM2O15394 837 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 DDHD2O94830 711 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 TGDSO95455 350 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 PTPN4P29074 926 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 RAB27AP51159 221 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 SLC5A3P53794 718 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 CNTD1Q8N815 330 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 ZNF358Q9NW07 568 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 RRN3Q9NYV6 651 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 DFFAO00273 331 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 BPGMP07738 259 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 KCNA4P22459 653 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 DCLRE1AQ6PJP8 1040 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 CMC1Q7Z7K0 106 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 CCNJLQ8IV13 435 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 INPP5DQ92835 1189 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 ZNF669Q96BR6 464 aaPredicted RBP17.01■□□□□ 0.31
TVP23B-202ENST00000476139 ZNF778Q96MU6 729 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 ARHGAP42A6NI28 874 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 N4BP2L1Q5TBK1 243 aaPredicted RBP17.01■□□□□ 0.31
TVP23B-202ENST00000476139 SPATA22Q8NHS9 363 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 IRGQQ8WZA9 623 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 CASP10Q92851 521 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 RNPEPL1Q9HAU8 725 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 MKS1Q9NXB0 559 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 NEU3Q9UQ49 428 aa17.01■□□□□ 0.31
TVP23B-202ENST00000476139 ZCWPW2A0A1B0GU75 182 aa17■□□□□ 0.31
TVP23B-202ENST00000476139 RASSF2P50749 326 aa17■□□□□ 0.31
TVP23B-202ENST00000476139 OCRLQ01968 901 aa17■□□□□ 0.31
TVP23B-202ENST00000476139 YWHAHQ04917 246 aaPredicted RBP17■□□□□ 0.31
TVP23B-202ENST00000476139 EIF4EBP2Q13542 120 aaPredicted RBP17■□□□□ 0.31
TVP23B-202ENST00000476139 KHDC1Q4VXA5 237 aaKnown RBP17■□□□□ 0.31
TVP23B-202ENST00000476139 HSP90AA5PQ58FG0 334 aa17■□□□□ 0.31
TVP23B-202ENST00000476139 RINLQ6ZS11 566 aa17■□□□□ 0.31
TVP23B-202ENST00000476139 ZNF598Q86UK7 904 aaKnown RBP17■□□□□ 0.31
TVP23B-202ENST00000476139 DPF3Q92784 378 aa17■□□□□ 0.31
TVP23B-202ENST00000476139 APBB2Q92870 758 aa17■□□□□ 0.31
TVP23B-202ENST00000476139 GBA3Q9H227 469 aa17■□□□□ 0.31
TVP23B-202ENST00000476139 NMUR1Q9HB89 426 aa17■□□□□ 0.31
TVP23B-202ENST00000476139 BFARQ9NZS9 450 aa17■□□□□ 0.31
TVP23B-202ENST00000476139 MX2P20592 715 aa17■□□□□ 0.31
TVP23B-202ENST00000476139 CNTFP26441 200 aa17■□□□□ 0.31
TVP23B-202ENST00000476139 NKX3-2P78367 333 aa17■□□□□ 0.31
TVP23B-202ENST00000476139 TAF11Q15544 211 aa17■□□□□ 0.31
TVP23B-202ENST00000476139 TRIM71Q2Q1W2 868 aaKnown RBP17■□□□□ 0.31
TVP23B-202ENST00000476139 FASTKD1Q53R41 847 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms