RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 RFWD3Q6PCD5 774 aa10.85□□□□□ -0.67
CALD1-217ENST00000475772 SCML4Q8N228 414 aa10.85□□□□□ -0.67
CALD1-217ENST00000475772 TSEN2Q8NCE0 465 aaKnown RBP10.85□□□□□ -0.67
CALD1-217ENST00000475772 CCDC150Q8NCX0 1101 aa10.85□□□□□ -0.67
CALD1-217ENST00000475772 WFIKKN2Q8TEU8 576 aa10.85□□□□□ -0.67
CALD1-217ENST00000475772 CLEC4CQ8WTT0 213 aa10.85□□□□□ -0.67
CALD1-217ENST00000475772 KCTD13Q8WZ19 329 aa10.85□□□□□ -0.67
CALD1-217ENST00000475772 TFAP2BQ92481 460 aa10.85□□□□□ -0.67
CALD1-217ENST00000475772 SNX19Q92543 992 aa10.85□□□□□ -0.67
CALD1-217ENST00000475772 CRELD1Q96HD1 420 aa10.85□□□□□ -0.67
CALD1-217ENST00000475772 MRGPRX3Q96LB0 322 aa10.85□□□□□ -0.67
CALD1-217ENST00000475772 CDC6Q99741 560 aa10.85□□□□□ -0.67
CALD1-217ENST00000475772 BTBD1Q9H0C5 482 aa10.85□□□□□ -0.67
CALD1-217ENST00000475772 LRRC4Q9HBW1 653 aa10.85□□□□□ -0.67
CALD1-217ENST00000475772 ABCC13Q9NSE7 274 aa10.85□□□□□ -0.67
CALD1-217ENST00000475772 OLA1Q9NTK5 396 aaKnown RBP10.85□□□□□ -0.67
CALD1-217ENST00000475772 SERGEFQ9UGK8 458 aa10.85□□□□□ -0.67
CALD1-217ENST00000475772 GGA2Q9UJY4 613 aa10.85□□□□□ -0.67
CALD1-217ENST00000475772 PLA2G4CQ9UP65 541 aa10.85□□□□□ -0.67
CALD1-217ENST00000475772 PTPRQQ9UMZ3 2332 aa10.85□□□□□ -0.67
CALD1-217ENST00000475772 A0A1B0GTH6 734 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 O00370 1275 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 WNT9AO14904 365 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 PAPSS1O43252 624 aaPredicted RBP10.84□□□□□ -0.67
CALD1-217ENST00000475772 TNFSF14O43557 240 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 PCDHGA12O60330 932 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 TBL1XO60907 577 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 FSBPO95073 299 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 LATS1O95835 1130 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 FYNP06241 537 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 DLDP09622 509 aaKnown RBP10.84□□□□□ -0.67
CALD1-217ENST00000475772 LCP1P13796 627 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 CD27P26842 260 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 HARS2P49590 506 aaKnown RBP10.84□□□□□ -0.67
CALD1-217ENST00000475772 PMS1P54277 932 aaKnown RBP10.84□□□□□ -0.67
CALD1-217ENST00000475772 BCAT1P54687 386 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 ARID5AQ03989 594 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 BST2Q10589 180 aaKnown RBP10.84□□□□□ -0.67
CALD1-217ENST00000475772 CUL2Q13617 745 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 SUZ12Q15022 739 aaKnown RBP10.84□□□□□ -0.67
CALD1-217ENST00000475772 E2F5Q15329 346 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 SHBQ15464 509 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 SMAD1Q15797 465 aaKnown RBP10.84□□□□□ -0.67
CALD1-217ENST00000475772 SGO2Q562F6 1265 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 MSANTD2Q6P1R3 559 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 AHI1Q8N157 1196 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 TTC39CQ8N584 583 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 SLC35F5Q8WV83 523 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 IGSF8Q969P0 613 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 TTC17Q96AE7 1141 aa10.84□□□□□ -0.67
CALD1-217ENST00000475772 RSPH9Q9H1X1 276 aaPredicted RBP10.84□□□□□ -0.67
CALD1-217ENST00000475772 NYNRINQ9P2P1 1898 aaKnown RBP10.83□□□□□ -0.68
CALD1-217ENST00000475772 A0A1B0GTQ1 180 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 A0A1W2PPC4 97 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 CBX4O00257 560 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 PIK3R2O00459 728 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 ACSL4O60488 711 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 ZNF202O95125 648 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 CALCAP01258 141 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 DNTTP04053 509 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 VDRP11473 427 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 PRCPP42785 496 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 RGS7P49802 495 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 GALCP54803 685 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 ZNF445P59923 1031 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 IL9RQ01113 521 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 ZBTB16Q05516 673 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 KCNJ12Q14500 433 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 FSCBQ5H9T9 825 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 MPP7Q5T2T1 576 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 KIAA0895LQ68EN5 471 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 ANKRD40Q6AI12 368 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 DHRS13Q6UX07 377 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 MMS22LQ6ZRQ5 1243 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 FIBINQ8TAL6 211 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 RNF139Q8WU17 664 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 SPATA32Q96LK8 384 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 PRICKLE1Q96MT3 831 aaPredicted RBP10.83□□□□□ -0.68
CALD1-217ENST00000475772 FAM129BQ96TA1 746 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 NEUROG2Q9H2A3 272 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 SGK2Q9HBY8 427 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 CNGB3Q9NQW8 809 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 SUN2Q9UH99 717 aa10.83□□□□□ -0.68
CALD1-217ENST00000475772 COL5A1P20908 1838 aaPredicted RBP10.83□□□□□ -0.68
CALD1-217ENST00000475772 A0A087WV48 116 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 A0A1W2PQ27 194 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 A0A1W2PQ64 194 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 A0A1W2PR77 199 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 CETN3O15182 167 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 VILLO15195 856 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 SIN3BO75182 1162 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 ATP5BP06576 529 aaKnown RBP10.82□□□□□ -0.68
CALD1-217ENST00000475772 EPB41P11171 864 aaKnown RBP10.82□□□□□ -0.68
CALD1-217ENST00000475772 CD19P15391 556 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 POLR2EP19388 210 aaKnown RBP10.82□□□□□ -0.68
CALD1-217ENST00000475772 CCT8P50990 548 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 CLDN6P56747 220 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 SLC8A3P57103 927 aa10.82□□□□□ -0.68
CALD1-217ENST00000475772 RPS24P62847 133 aaKnown RBP10.82□□□□□ -0.68
CALD1-217ENST00000475772 RACK1P63244 317 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms