RNA–Protein interactions for RNA: ENST00000475315.5

FXR1-211, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-211	ENST00000475315	ABCA3	Q99758	1704 aa		12.01	□□□□□ -0.49
FXR1-211	ENST00000475315	TPP1	O14773	563 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	IL18RAP	O95256	599 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	CPNE6	O95741	557 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	CALB1	P05937	261 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	BMP2	P12643	396 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	TCN1	P20061	433 aa	Predicted RBP	12	□□□□□ -0.49
FXR1-211	ENST00000475315	ADSL	P30566	484 aa	Predicted RBP	12	□□□□□ -0.49
FXR1-211	ENST00000475315	OPRL1	P41146	370 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	NME5	P56597	212 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	IFITM3	Q01628	133 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	ENPEP	Q07075	957 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	INSC	Q1MX18	579 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	INAVA	Q3KP66	663 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	KCNT1	Q5JUK3	1230 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	IRAK1BP1	Q5VVH5	260 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	DCUN1D2	Q6PH85	259 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	KCTD8	Q6ZWB6	473 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	C14orf80	Q86SX3	495 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	FBXO11	Q86XK2	927 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	PEX5L	Q8IYB4	626 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	LILRB4	Q8NHJ6	448 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	DCAF4	Q8WV16	495 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	SH3YL1	Q96HL8	342 aa	Predicted RBP	12	□□□□□ -0.49
FXR1-211	ENST00000475315	GPN2	Q9H9Y4	310 aa	Predicted RBP	12	□□□□□ -0.49
FXR1-211	ENST00000475315	CD209	Q9NNX6	404 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	RAB6B	Q9NRW1	208 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	MOCS1	Q9NZB8	636 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	CARD8	Q9Y2G2	431 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	PCDHAC2	Q9Y5I4	1007 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	ST14	Q9Y5Y6	855 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	GOLGA8Q	A0A0J9YX86	632 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	GOLGA8O	A6NCC3	632 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	TCAF2	A6NFQ2	919 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	GOLGA8N	F8WBI6	632 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	LRCH4	O75427	683 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	MAP4	P27816	1152 aa	Known RBP	12	□□□□□ -0.49
FXR1-211	ENST00000475315	MZF1	P28698	734 aa	Predicted RBP	12	□□□□□ -0.49
FXR1-211	ENST00000475315	TRPC1	P48995	793 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	ROR1	Q01973	937 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	NOMO1	Q15155	1222 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	SLC36A3	Q495N2	470 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12	□□□□□ -0.49
FXR1-211	ENST00000475315	PPP2R2D	Q66LE6	453 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	TMEM270	Q6UE05	265 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	KCNT2	Q6UVM3	1135 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	NAPRT	Q6XQN6	538 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	USP43	Q70EL4	1123 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	ZNF534	Q76KX8	674 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	PACRGL	Q8N7B6	248 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	SPATA18	Q8TC71	538 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	WDR11	Q9BZH6	1224 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	PCDHAC1	Q9H158	963 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	MUC3B	Q9H195	1237 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	WDR55	Q9H6Y2	383 aa	Predicted RBP	12	□□□□□ -0.49
FXR1-211	ENST00000475315	EFCAB1	Q9HAE3	211 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	ARHGAP28	Q9P2N2	729 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	SLC27A5	Q9Y2P5	690 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	PCDHB4	Q9Y5E5	795 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315	NRAP	Q86VF7	1730 aa		12	□□□□□ -0.49
FXR1-211	ENST00000475315		A0A1W2PQ67	120 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	CLOCK	O15516	846 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	HLA-DRA	P01903	254 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	KRT7	P08729	469 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	POLR2E	P19388	210 aa	Known RBP	11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	ADORA2A	P29274	412 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	TAP1	Q03518	808 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	ART3	Q13508	389 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	ZNF846	Q147U1	533 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	NPNT	Q6UXI9	565 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	RFX6	Q8HWS3	928 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	MAP4K3	Q8IVH8	894 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	RAVER1	Q8IY67	606 aa	Known RBP	11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	KIAA0319L	Q8IZA0	1049 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	ELMOD1	Q8N336	334 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	MPP5	Q8N3R9	675 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	TMCO5A	Q8N6Q1	288 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	ABHD11	Q8NFV4	315 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	ADAM32	Q8TC27	787 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	DEPDC1B	Q8WUY9	529 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	TRIB2	Q92519	343 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	CSF3R	Q99062	836 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	EBNA1BP2	Q99848	306 aa	Known RBP	11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	ADI1	Q9BV57	179 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	HOXD1	Q9GZZ0	328 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	APOBEC3G	Q9HC16	384 aa	Known RBP	11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	PAK5	Q9P286	719 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	SLC9A2	Q9UBY0	812 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	TBX20	Q9UMR3	447 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	PCDHGC3	Q9UN70	934 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	PCDHGA7	Q9Y5G6	932 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	PCDHA11	Q9Y5I1	949 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	NOTO	A8MTQ0	251 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	CLDN25	C9JDP6	229 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	CHEK2	O96017	543 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	JUNB	P17275	347 aa	Predicted RBP	11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	BMPR1A	P36894	532 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	POLR2I	P36954	125 aa	Known RBP	11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	RARRES1	P49788	294 aa		11.99	□□□□□ -0.49
FXR1-211	ENST00000475315	TPTE	P56180	551 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms