RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 GP5P40197 560 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 MMP13P45452 471 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 NUP107P57740 925 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 COX10Q12887 443 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 INAQ16352 499 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 SERPINB11Q96P15 392 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 TRIM8Q9BZR9 551 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 CDHR5Q9HBB8 845 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 UBA2Q9UBT2 640 aaPredicted RBP11.16□□□□□ -0.62
VAPB-204ENST00000475243 DDX20Q9UHI6 824 aaKnown RBP11.16□□□□□ -0.62
VAPB-204ENST00000475243 REREQ9P2R6 1566 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 TRIM13O60858 407 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 PABPC1P11940 636 aaKnown RBP11.16□□□□□ -0.62
VAPB-204ENST00000475243 TALDO1P37837 337 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 ZNF268Q14587 947 aaPredicted RBP11.16□□□□□ -0.62
VAPB-204ENST00000475243 PFKFB4Q16877 469 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 SCARA3Q6AZY7 606 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 ULBP1Q9BZM6 244 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 C6orf62Q9GZU0 229 aaPredicted RBP11.16□□□□□ -0.62
VAPB-204ENST00000475243 ARL15Q9NXU5 204 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 CROTQ9UKG9 612 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 SPATA2Q9UM82 520 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 SIK3Q9Y2K2 1263 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 MYH10P35580 1976 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 KIF1CO43896 1103 aaKnown RBP11.16□□□□□ -0.62
VAPB-204ENST00000475243 SLC6A3Q01959 620 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 ARMC12Q5T9G4 340 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 WSCD1Q658N2 575 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 ELOVL4Q9GZR5 314 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 RIMS1Q86UR5 1692 aaKnown RBP11.16□□□□□ -0.62
VAPB-204ENST00000475243 PTPRMP28827 1452 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 ATP9AO75110 1047 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 AKR1A1P14550 325 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 PECAM1P16284 738 aaPredicted RBP11.16□□□□□ -0.62
VAPB-204ENST00000475243 ELAVL2Q12926 359 aaKnown RBP11.16□□□□□ -0.62
VAPB-204ENST00000475243 CASP12Q6UXS9 341 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 STK32CQ86UX6 486 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 COPS5Q92905 334 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 MRPL48Q96GC5 212 aaKnown RBP11.16□□□□□ -0.62
VAPB-204ENST00000475243 MARCH2Q9P0N8 246 aa11.16□□□□□ -0.62
VAPB-204ENST00000475243 ADGRA3Q8IWK6 1321 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 CHURC1-FNTBB4DL54 471 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 IL1R1P14778 569 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 PGAM1P18669 254 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 PTPN3P26045 913 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 NUP62P37198 522 aaPredicted RBP11.15□□□□□ -0.62
VAPB-204ENST00000475243 MAPK11Q15759 364 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 CYP4X1Q8N118 509 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 RIBC2Q9H4K1 309 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 MRPL39Q9NYK5 338 aaKnown RBP11.15□□□□□ -0.62
VAPB-204ENST00000475243 DNALI1O14645 258 aaPredicted RBP11.15□□□□□ -0.62
VAPB-204ENST00000475243 HLA-DQA2P01906 255 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 INSCQ1MX18 579 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 KIAA1683Q9H0B3 1180 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 LRRC4BQ9NT99 713 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 THAP1Q9NVV9 213 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 PSMB4P28070 264 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 CD86P42081 329 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 FAM45BPQ6NSW5 357 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 C16orf62Q7Z3J2 963 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 RSPH1Q8WYR4 309 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 BDH2Q9BUT1 245 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 SERHL2Q9H4I8 314 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 NMRAL1Q9HBL8 299 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 SERHLQ9NQF3 203 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 INVSQ9Y283 1065 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 C1orf232A0A0U1RR37 186 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 TSPAN8P19075 237 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 RAD23AP54725 363 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 FIGNQ5HY92 759 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 RNF44Q7L0R7 432 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 TMEM132CQ8N3T6 1108 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 OR56A4Q8NGH8 313 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 DPP7Q9UHL4 492 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 GON4LQ3T8J9 2241 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 ACKR2O00590 384 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 PTPN4P29074 926 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 PDZK1Q5T2W1 519 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 IRAK1BP1Q5VVH5 260 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 RAP1GAP2Q684P5 730 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 IZUMO1Q8IYV9 350 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 ZBTB10Q96DT7 871 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 PNMA5Q96PV4 448 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 SIKE1Q9BRV8 207 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 NLNQ9BYT8 704 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 TM6SF2Q9BZW4 377 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 SEMA4BQ9NPR2 832 aaPredicted RBP11.15□□□□□ -0.62
VAPB-204ENST00000475243 PDP2Q9P2J9 529 aa11.15□□□□□ -0.62
VAPB-204ENST00000475243 MYO9BQ13459 2157 aa11.15□□□□□ -0.63
VAPB-204ENST00000475243 A0A087X0B3 334 aa11.15□□□□□ -0.63
VAPB-204ENST00000475243 TPP1O14773 563 aa11.15□□□□□ -0.63
VAPB-204ENST00000475243 TBC1D12O60347 775 aa11.15□□□□□ -0.63
VAPB-204ENST00000475243 MTA2O94776 668 aa11.15□□□□□ -0.63
VAPB-204ENST00000475243 NTRK1P04629 796 aa11.15□□□□□ -0.63
VAPB-204ENST00000475243 NFKB1P19838 968 aa11.15□□□□□ -0.63
VAPB-204ENST00000475243 HSPA14Q0VDF9 509 aa11.15□□□□□ -0.63
VAPB-204ENST00000475243 CDKAL1Q5VV42 579 aa11.15□□□□□ -0.63
VAPB-204ENST00000475243 ZDHHC17Q8IUH5 632 aa11.15□□□□□ -0.63
VAPB-204ENST00000475243 PRRG3Q9BZD7 231 aa11.15□□□□□ -0.63
VAPB-204ENST00000475243 BCL2L14Q9BZR8 327 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms