RNA–Protein interactions for RNA: ENST00000475076.5

DYSF-215, Transcript of dysferlin, human

TSL 2

Gene DYSF, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DYSF-215	ENST00000475076	GJB3	O75712	270 aa		13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	DNTT	P04053	509 aa		13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	SRPRA	P08240	638 aa	Known RBP	13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	CCDC172	P0C7W6	258 aa		13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	CD59	P13987	128 aa		13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	CCR1	P32246	355 aa		13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	ACSL1	P33121	698 aa		13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	ADK	P55263	362 aa	Known RBP	13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	SLC6A3	Q01959	620 aa		13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	FOXC1	Q12948	553 aa		13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	GRIK2	Q13002	908 aa		13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	SLC14A1	Q13336	389 aa		13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	TTC31	Q49AM3	519 aa	Predicted RBP	13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	ZNF776	Q68DI1	518 aa	Predicted RBP	13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	FAM183BP	Q6ZVS7	135 aa		13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	SLC47A2	Q86VL8	602 aa		13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	FAM71A	Q8IYT1	594 aa		13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	ZCCHC9	Q8N567	271 aa	Known RBP	13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	C1orf216	Q8TAB5	229 aa		13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	PRMT1	Q99873	361 aa	Known RBP	13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	BTBD1	Q9H0C5	482 aa		13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	RSPH9	Q9H1X1	276 aa	Predicted RBP	13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	C6orf106	Q9H6K1	298 aa	Predicted RBP	13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	FAM204A	Q9H8W3	233 aa		13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	EIF2B4	Q9UI10	523 aa	Known RBP	13.71	□□□□□ -0.21
DYSF-215	ENST00000475076	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	LRRC53	A6NM62	1247 aa		13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	GRAP2	O75791	330 aa		13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	ERBB2	P04626	1255 aa		13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	PNMA6A	P0CW24	399 aa	Predicted RBP	13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	FER	P16591	822 aa		13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	ABCB4	P21439	1286 aa		13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	SOX5	P35711	763 aa		13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	HNRNPD	Q14103	355 aa	Known RBP	13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	PTPN20	Q4JDL3	420 aa		13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	SFMBT2	Q5VUG0	894 aa		13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	OLFML1	Q6UWY5	402 aa		13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	SLC26A9	Q7LBE3	791 aa		13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	APCDD1	Q8J025	514 aa		13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	RNF34	Q969K3	372 aa		13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	SGK2	Q9HBY8	427 aa		13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	ABHD10	Q9NUJ1	306 aa		13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	DDIT4	Q9NX09	232 aa		13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	COX16	Q9P0S2	106 aa		13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	SCML1	Q9UN30	329 aa		13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	WASF3	Q9UPY6	502 aa		13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	CEP83	Q9Y592	693 aa		13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.7	□□□□□ -0.22
DYSF-215	ENST00000475076	TARSL2	A2RTX5	802 aa	Known RBP	13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	SIN3B	O75182	1162 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	DAB1	O75553	588 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	SEMA4F	O95754	770 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	FECH	P22830	423 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	CDH5	P33151	784 aa	Predicted RBP	13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	NOS2	P35228	1153 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	PRKCI	P41743	596 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	CTSO	P43234	321 aa	Predicted RBP	13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	PLK1	P53350	603 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	ECT2L	Q008S8	904 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	SFSWAP	Q12872	951 aa	Known RBP	13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	MTA1	Q13330	715 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	SLC12A1	Q13621	1099 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	ST3GAL2	Q16842	350 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	RABGAP1L	Q5R372	815 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	C9orf64	Q5T6V5	341 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	FBXL22	Q6P050	247 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	USP30	Q70CQ3	517 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	IRF2BP2	Q7Z5L9	587 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	ZDHHC17	Q8IUH5	632 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	CCAR2	Q8N163	923 aa	Known RBP	13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	TMEM35B	Q8NCS4	154 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	SNX19	Q92543	992 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	PABPC3	Q9H361	631 aa	Known RBP	13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	SYNC	Q9H7C4	482 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	SLCO3A1	Q9UIG8	710 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	NCKAP1	Q9Y2A7	1128 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	BZW2	Q9Y6E2	419 aa	Known RBP	13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	TMEM131	Q92545	1883 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	EPG5	Q9HCE0	2579 aa		13.69	□□□□□ -0.22
DYSF-215	ENST00000475076	CHD8	Q9HCK8	2581 aa		13.68	□□□□□ -0.22
DYSF-215	ENST00000475076	EDDM13	A0A1B0GTR0	161 aa		13.68	□□□□□ -0.22
DYSF-215	ENST00000475076		A0A1B0GVM2	712 aa		13.68	□□□□□ -0.22
DYSF-215	ENST00000475076	SPAAR	A0A1B0GVQ0	90 aa		13.68	□□□□□ -0.22
DYSF-215	ENST00000475076	TCAF2	A6NFQ2	919 aa		13.68	□□□□□ -0.22
DYSF-215	ENST00000475076	TTC34	A8MYJ7	566 aa		13.68	□□□□□ -0.22
DYSF-215	ENST00000475076		M0QYT0	321 aa		13.68	□□□□□ -0.22
DYSF-215	ENST00000475076	RNASEH1	O60930	286 aa	Known RBP	13.68	□□□□□ -0.22
DYSF-215	ENST00000475076	PTMA	P06454	111 aa	Known RBP	13.68	□□□□□ -0.22
DYSF-215	ENST00000475076	CYP11B1	P15538	503 aa		13.68	□□□□□ -0.22
DYSF-215	ENST00000475076	PDGFRA	P16234	1089 aa		13.68	□□□□□ -0.22
DYSF-215	ENST00000475076	OXCT1	P55809	520 aa		13.68	□□□□□ -0.22
DYSF-215	ENST00000475076	SIM1	P81133	766 aa	Predicted RBP	13.68	□□□□□ -0.22
DYSF-215	ENST00000475076	BNC1	Q01954	994 aa		13.68	□□□□□ -0.22
DYSF-215	ENST00000475076	SULT2A1	Q06520	285 aa		13.68	□□□□□ -0.22
DYSF-215	ENST00000475076	AUH	Q13825	339 aa	Known RBP	13.68	□□□□□ -0.22
DYSF-215	ENST00000475076	ASIC2	Q16515	512 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms