RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 OSGEPL1Q9H4B0 414 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 PCDH9Q9HC56 1237 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 PCDH18Q9HCL0 1135 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 SOHLH2Q9NX45 425 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 KIF17Q9P2E2 1029 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 CD207Q9UJ71 328 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 BLOC1S6Q9UL45 172 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 ZMYND8Q9ULU4 1186 aaPredicted RBP4.71□□□□□ -1.65
CCNL1-215ENST00000474539 HPS5Q9UPZ3 1129 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 SHOC2Q9UQ13 582 aa4.71□□□□□ -1.65
CCNL1-215ENST00000474539 TDRKHQ9Y2W6 561 aaKnown RBP4.71□□□□□ -1.65
CCNL1-215ENST00000474539 IGKV6D-41A0A0C4DH26 115 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 A0A0U1RQF3 1178 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 MGAT4DA6NG13 374 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 SIGLEC16A6NMB1 481 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 RHPN2P1A8MT19 583 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 H3BUI4 141 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 TRDMT1O14717 391 aaKnown RBP4.71□□□□□ -1.66
CCNL1-215ENST00000474539 PMM2O15305 246 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 DFNA5O60443 496 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 TBL1XO60907 577 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 TRUB2O95900 331 aaKnown RBP4.71□□□□□ -1.66
CCNL1-215ENST00000474539 GSNP06396 782 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 FGFR1P11362 822 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 ESRRAP11474 423 aaPredicted RBP4.71□□□□□ -1.66
CCNL1-215ENST00000474539 NR2C1P13056 603 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 ENDOUP21128 410 aaKnown RBP4.71□□□□□ -1.66
CCNL1-215ENST00000474539 GPC1P35052 558 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 RPA3P35244 121 aaPredicted RBP4.71□□□□□ -1.66
CCNL1-215ENST00000474539 CD151P48509 253 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 VEGFBP49765 207 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 NDST2P52849 883 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 PSMD4P55036 377 aaKnown RBP4.71□□□□□ -1.66
CCNL1-215ENST00000474539 ATP6V0D1P61421 351 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 MGAT5Q09328 741 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 CAPSQ13938 189 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 PTPN21Q16825 1174 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 ITPRIPL2Q3MIP1 535 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 SPDYCQ5MJ68 293 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 ATXN7L2Q5T6C5 722 aaPredicted RBP4.71□□□□□ -1.66
CCNL1-215ENST00000474539 DAB2IPQ5VWQ8 1189 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 LVRNQ6Q4G3 990 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 RFX8Q6ZV50 586 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 CBWD2Q8IUF1 395 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 DDIASQ8IXT1 998 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 CCNYL1Q8N7R7 359 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 TPCN2Q8NHX9 752 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 SLC2A14Q8TDB8 520 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 BLOC1S5Q8TDH9 187 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 SERAC1Q96JX3 654 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 CBWD1Q9BRT8 395 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 TRIM4Q9C037 500 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 IL22Q9GZX6 179 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 NRDE2Q9H7Z3 1164 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 CLIC5Q9NZA1 410 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 HSFX1Q9UBD0 423 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 RBPJLQ9UBG7 517 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 ADGRE2Q9UHX3 823 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 SLC24A2Q9UI40 661 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 RABGEF1Q9UJ41 708 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 BACE2Q9Y5Z0 518 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 NHSL1Q5SYE7 1610 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 F8W810 466 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 ZNF500O60304 480 aaPredicted RBP4.71□□□□□ -1.66
CCNL1-215ENST00000474539 E2F6O75461 281 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 STAU1O95793 577 aaKnown RBP4.71□□□□□ -1.66
CCNL1-215ENST00000474539 F2P00734 622 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 APRTP07741 180 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 BDNFP23560 247 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 ARL2P36404 184 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 UBXN2BQ14CS0 331 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 GSTA3Q16772 222 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 CCDC153Q494R4 210 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 DNAL1Q4LDG9 190 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 RFTN2Q52LD8 501 aaPredicted RBP4.71□□□□□ -1.66
CCNL1-215ENST00000474539 ZC2HC1CQ53FD0 456 aaPredicted RBP4.71□□□□□ -1.66
CCNL1-215ENST00000474539 FAM45BPQ6NSW5 357 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 LLGL2Q6P1M3 1020 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 LRRC69Q6ZNQ3 347 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 SMIM5Q71RC9 77 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 SH3BP5LQ7L8J4 393 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 GLT6D1Q7Z4J2 308 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 SRLQ86TD4 932 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 ZBED8Q8IZ13 594 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 MYRIPQ8NFW9 859 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 FAM45AQ8TCE6 357 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 BPIFB1Q8TDL5 484 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 INPP5DQ92835 1189 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 PPWD1Q96BP3 646 aaKnown RBP4.71□□□□□ -1.66
CCNL1-215ENST00000474539 REXO5Q96IC2 774 aaKnown RBP4.71□□□□□ -1.66
CCNL1-215ENST00000474539 SUSD3Q96L08 255 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 C8orf48Q96LL4 319 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 PSMB7Q99436 277 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 ZSWIM1Q9BR11 485 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 TTLL2Q9BWV7 592 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 GSDMCQ9BYG8 508 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 DHX33Q9H6R0 707 aaKnown RBP4.71□□□□□ -1.66
CCNL1-215ENST00000474539 CPSF2Q9P2I0 782 aaKnown RBP4.71□□□□□ -1.66
CCNL1-215ENST00000474539 SPASTQ9UBP0 616 aa4.71□□□□□ -1.66
CCNL1-215ENST00000474539 GGT7Q9UJ14 662 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms