RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 DPH5Q9H2P9 285 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 PCDH9Q9HC56 1237 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 EPB41L5Q9HCM4 733 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 ETNK2Q9NVF9 386 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 DUS2Q9NX74 493 aaKnown RBP10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 PAK5Q9P286 719 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 KLHL8Q9P2G9 620 aaPredicted RBP10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 MTRF1LQ9UGC7 380 aaKnown RBP10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 TTLL3Q9Y4R7 772 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 BCLAF3A2AJT9 711 aaKnown RBP10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 DRGXA6NNA5 263 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 RASA4BC9J798 803 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 NEDD8-MDP1E9PL57 170 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 I6L893 689 aaPredicted RBP10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 RASA4O43374 803 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 TBX10O75333 385 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 MOSPD3O75425 235 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 LUC7L3O95232 432 aaKnown RBP10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 PRAMEF12O95522 483 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 KLKB1P03952 638 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 TCF3P15923 654 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 WEE1P30291 646 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 GARSP41250 739 aaKnown RBP10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 BASP1P80723 227 aaKnown RBP10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 CAV1Q03135 178 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 ZNF33AQ06730 810 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 GALNT2Q10471 571 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 GPS1Q13098 491 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 PTK6Q13882 451 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 PRPSAP1Q14558 356 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 TRIP13Q15645 432 aaPredicted RBP10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 ZNF77Q15935 545 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 P3H1Q32P28 736 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 TTC27Q6P3X3 843 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 SYCE2Q6PIF2 218 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 Q6ZNB5 142 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 CEP128Q6ZU80 1094 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 UMODL1-AS1Q8N2C9 162 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 CCDC33Q8N5R6 958 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 KIAA1958Q8N8K9 716 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 FAM71DQ8N9W8 422 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 LRRN4CLQ8ND94 238 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 SLCO2A1Q92959 643 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 ATP2A3Q93084 1043 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 BHMTQ93088 406 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 IGSF8Q969P0 613 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 HDAC11Q96DB2 347 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 LRCH3Q96II8 777 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 ASB16Q96NS5 453 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 PPP1R2P1Q96PQ5 205 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 XPO6Q96QU8 1125 aaKnown RBP10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 VAT1Q99536 393 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 ERP44Q9BS26 406 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 TRIM51Q9BSJ1 452 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 SPON2Q9BUD6 331 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 BBS2Q9BXC9 721 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 FAM129AQ9BZQ8 928 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 ATP13A1Q9HD20 1204 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 OBP2AQ9NY56 170 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 STOML2Q9UJZ1 356 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 FAM50BQ9Y247 325 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 CCL26Q9Y258 94 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 NR2E1Q9Y466 385 aa10.53□□□□□ -0.72
PRPF38A-202ENST00000474048 DOCK4Q8N1I0 1966 aa10.52□□□□□ -0.72
PRPF38A-202ENST00000474048 SHROOM3Q8TF72 1996 aa10.52□□□□□ -0.72
PRPF38A-202ENST00000474048 ILVBLA1L0T0 632 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 RNF103O00237 685 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 CTIFO43310 598 aaKnown RBP10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 OPHN1O60890 802 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 CNTN5O94779 1100 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 PAPLNO95428 1278 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 CCNCP24863 283 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 RBL1P28749 1068 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 GEMIN4P57678 1058 aaKnown RBP10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 RPS24P62847 133 aaKnown RBP10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 SARNPP82979 210 aaKnown RBP10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 GNA12Q03113 381 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 PPIDQ08752 370 aaKnown RBP10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 ZNF235Q14590 738 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 PDGFRLQ15198 375 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 OASLQ15646 514 aaKnown RBP10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 CCDC85BQ15834 202 aaPredicted RBP10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 ALFQ53S48 1182 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 FAM78AQ5JUQ0 283 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 MPP7Q5T2T1 576 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 GPR153Q6NV75 609 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 ZNF783Q6ZMS7 281 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 NLRP14Q86W24 1093 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 CPA6Q8N4T0 437 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 NPWQ8N729 165 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 PPM1EQ8WY54 764 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 PRICKLE1Q96MT3 831 aaPredicted RBP10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 OLFM3Q96PB7 478 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 LGMNQ99538 433 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 C2orf49Q9BVC5 232 aaPredicted RBP10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 SPHK2Q9NRA0 654 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 CLEC1BQ9P126 229 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 VPS28Q9UK41 221 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 TRHDEQ9UKU6 1024 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 MFHAS1Q9Y4C4 1052 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms