RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 PTP4A2Q12974 167 aa23.21■■□□□ 1.31
PTP4A1-203ENST00000473334 IQCB1Q15051 598 aa23.21■■□□□ 1.31
PTP4A1-203ENST00000473334 TTC31Q49AM3 519 aaPredicted RBP23.21■■□□□ 1.31
PTP4A1-203ENST00000473334 WDR45BQ5MNZ6 344 aa23.21■■□□□ 1.31
PTP4A1-203ENST00000473334 PHLDB2Q86SQ0 1253 aa23.21■■□□□ 1.31
PTP4A1-203ENST00000473334 FAM124AQ86V42 546 aa23.21■■□□□ 1.31
PTP4A1-203ENST00000473334 RPL10LQ96L21 214 aaKnown RBP23.21■■□□□ 1.31
PTP4A1-203ENST00000473334 C1orf74Q96LT6 269 aa23.21■■□□□ 1.31
PTP4A1-203ENST00000473334 AGPAT1Q99943 283 aa23.21■■□□□ 1.31
PTP4A1-203ENST00000473334 RSPH9Q9H1X1 276 aaPredicted RBP23.21■■□□□ 1.31
PTP4A1-203ENST00000473334 SEPT11Q9NVA2 429 aaKnown RBP23.21■■□□□ 1.31
PTP4A1-203ENST00000473334 ADAM22Q9P0K1 906 aa23.21■■□□□ 1.31
PTP4A1-203ENST00000473334 SLC6A14Q9UN76 642 aa23.21■■□□□ 1.31
PTP4A1-203ENST00000473334 EDDM13A0A1B0GTR0 161 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 SYCE3A1L190 88 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 C4orf47A7E2U8 309 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 MEI4A8MW99 385 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 TTC34A8MYJ7 566 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 ENDOD1O94919 500 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 SERPINF2P08697 491 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 NNMTP40261 264 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 STK19P49842 368 aaPredicted RBP23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 ATP11AP98196 1134 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 C9orf64Q5T6V5 341 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 LRRC31Q6UY01 552 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 FAM131BQ86XD5 332 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 PHF13Q86YI8 300 aaPredicted RBP23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 ZNF683Q8IZ20 524 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 OR52K2Q8NGK3 314 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 ALG14Q96F25 216 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 HAPLN3Q96S86 360 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 TMPRSS4Q9NRS4 437 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 SUSD2Q9UGT4 822 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 SLCO3A1Q9UIG8 710 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 MYO6Q9UM54 1294 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 SCML1Q9UN30 329 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 TBC1D30Q9Y2I9 924 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 SNX10Q9Y5X0 201 aa23.2■■□□□ 1.3
PTP4A1-203ENST00000473334 CDX4O14627 284 aaPredicted RBP23.19■■□□□ 1.3
PTP4A1-203ENST00000473334 RNASEH1O60930 286 aaKnown RBP23.19■■□□□ 1.3
PTP4A1-203ENST00000473334 CNTN5O94779 1100 aa23.19■■□□□ 1.3
PTP4A1-203ENST00000473334 CALB1P05937 261 aa23.19■■□□□ 1.3
PTP4A1-203ENST00000473334 ENGP17813 658 aa23.19■■□□□ 1.3
PTP4A1-203ENST00000473334 SDC4P31431 198 aa23.19■■□□□ 1.3
PTP4A1-203ENST00000473334 NUMBP49757 651 aa23.19■■□□□ 1.3
PTP4A1-203ENST00000473334 ALFQ53S48 1182 aa23.19■■□□□ 1.3
PTP4A1-203ENST00000473334 PPM1JQ5JR12 505 aa23.19■■□□□ 1.3
PTP4A1-203ENST00000473334 DAB2IPQ5VWQ8 1189 aa23.19■■□□□ 1.3
PTP4A1-203ENST00000473334 JOSD2Q8TAC2 188 aa23.19■■□□□ 1.3
PTP4A1-203ENST00000473334 RXFP2Q8WXD0 754 aa23.19■■□□□ 1.3
PTP4A1-203ENST00000473334 DNASE2BQ8WZ79 361 aa23.19■■□□□ 1.3
PTP4A1-203ENST00000473334 BAP1Q92560 729 aa23.19■■□□□ 1.3
PTP4A1-203ENST00000473334 FEM1AQ9BSK4 669 aa23.19■■□□□ 1.3
PTP4A1-203ENST00000473334 PCED1AQ9H1Q7 454 aa23.19■■□□□ 1.3
PTP4A1-203ENST00000473334 CAPN10Q9HC96 672 aa23.19■■□□□ 1.3
PTP4A1-203ENST00000473334 DOCK4Q8N1I0 1966 aa23.19■■□□□ 1.3
PTP4A1-203ENST00000473334 PCDH15Q96QU1 1955 aa23.19■■□□□ 1.3
PTP4A1-203ENST00000473334 ADAMTS9Q9P2N4 1935 aa23.19■■□□□ 1.3
PTP4A1-203ENST00000473334 IGLV3-10A0A075B6K4 115 aa23.18■■□□□ 1.3
PTP4A1-203ENST00000473334 A0A1B0GTH6 734 aa23.18■■□□□ 1.3
PTP4A1-203ENST00000473334 C2CD4BA6NLJ0 364 aa23.18■■□□□ 1.3
PTP4A1-203ENST00000473334 DRGXA6NNA5 263 aa23.18■■□□□ 1.3
PTP4A1-203ENST00000473334 METTL12A8MUP2 240 aa23.18■■□□□ 1.3
PTP4A1-203ENST00000473334 E9PAM4 449 aa23.18■■□□□ 1.3
PTP4A1-203ENST00000473334 KRT3P12035 628 aa23.18■■□□□ 1.3
PTP4A1-203ENST00000473334 GNSP15586 552 aa23.18■■□□□ 1.3
PTP4A1-203ENST00000473334 PTMSP20962 102 aa23.18■■□□□ 1.3
PTP4A1-203ENST00000473334 VASPP50552 380 aaPredicted RBP23.18■■□□□ 1.3
PTP4A1-203ENST00000473334 GFPT1Q06210 699 aaPredicted RBP23.18■■□□□ 1.3
PTP4A1-203ENST00000473334 CDO1Q16878 200 aa23.18■■□□□ 1.3
PTP4A1-203ENST00000473334 DCAF12L1Q5VU92 463 aa23.18■■□□□ 1.3
PTP4A1-203ENST00000473334 MON1BQ7L1V2 547 aa23.18■■□□□ 1.3
PTP4A1-203ENST00000473334 SELENOOQ9BVL4 669 aa23.18■■□□□ 1.3
PTP4A1-203ENST00000473334 BTBD1Q9H0C5 482 aa23.18■■□□□ 1.3
PTP4A1-203ENST00000473334 SLC25A13Q9UJS0 675 aa23.18■■□□□ 1.3
PTP4A1-203ENST00000473334 VPS28Q9UK41 221 aa23.18■■□□□ 1.3
PTP4A1-203ENST00000473334 OR51B4Q9Y5P0 310 aa23.18■■□□□ 1.3
PTP4A1-203ENST00000473334 A0A1W2PQC6 194 aa23.17■■□□□ 1.3
PTP4A1-203ENST00000473334 GJB6O95452 261 aa23.17■■□□□ 1.3
PTP4A1-203ENST00000473334 RHOCP08134 193 aa23.17■■□□□ 1.3
PTP4A1-203ENST00000473334 MAOBP27338 520 aa23.17■■□□□ 1.3
PTP4A1-203ENST00000473334 ACSL1P33121 698 aa23.17■■□□□ 1.3
PTP4A1-203ENST00000473334 PTPN9P43378 593 aa23.17■■□□□ 1.3
PTP4A1-203ENST00000473334 C1QBPQ07021 282 aaKnown RBP23.17■■□□□ 1.3
PTP4A1-203ENST00000473334 CST6Q15828 149 aa23.17■■□□□ 1.3
PTP4A1-203ENST00000473334 C15orf59Q2T9L4 293 aaPredicted RBP23.17■■□□□ 1.3
PTP4A1-203ENST00000473334 CCDC14Q49A88 953 aa23.17■■□□□ 1.3
PTP4A1-203ENST00000473334 USP30Q70CQ3 517 aa23.17■■□□□ 1.3
PTP4A1-203ENST00000473334 STRADAQ7RTN6 431 aa23.17■■□□□ 1.3
PTP4A1-203ENST00000473334 IRF2BP2Q7Z5L9 587 aa23.17■■□□□ 1.3
PTP4A1-203ENST00000473334 C3orf20Q8ND61 904 aa23.17■■□□□ 1.3
PTP4A1-203ENST00000473334 PTPRN2Q92932 1015 aa23.17■■□□□ 1.3
PTP4A1-203ENST00000473334 MUC3BQ9H195 1237 aa23.17■■□□□ 1.3
PTP4A1-203ENST00000473334 PABPC3Q9H361 631 aaKnown RBP23.17■■□□□ 1.3
PTP4A1-203ENST00000473334 NCKAP1Q9Y2A7 1128 aa23.17■■□□□ 1.3
PTP4A1-203ENST00000473334 NUMA1Q14980 2115 aa23.17■■□□□ 1.3
PTP4A1-203ENST00000473334 SERPINC1P01008 464 aa23.16■■□□□ 1.3
PTP4A1-203ENST00000473334 MAPK8P45983 427 aa23.16■■□□□ 1.3
PTP4A1-203ENST00000473334 TPM4P67936 248 aa23.16■■□□□ 1.3
PTP4A1-203ENST00000473334 SFSWAPQ12872 951 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms