RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 RIPK1Q13546 671 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 UPP1Q16831 310 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 FAM26DQ5JW98 314 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 BRMS1LQ5PSV4 323 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 FAXCQ5TGI0 409 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 ARMC3Q5W041 872 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 FBXW10Q5XX13 1052 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 PM20D1Q6GTS8 502 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 CASC4Q6P4E1 433 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 FAM171BQ6P995 826 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 DCLRE1AQ6PJP8 1040 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 KYAT3Q6YP21 454 aaKnown RBP7.83□□□□□ -1.16
CCDC171-205ENST00000472806 IGDCC3Q8IVU1 814 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 AGGF1Q8N302 714 aaeCLIP7.83□□□□□ -1.16
CCDC171-205ENST00000472806 LZTR1Q8N653 840 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 SREK1Q8WXA9 508 aaKnown RBP7.83□□□□□ -1.16
CCDC171-205ENST00000472806 INPP5DQ92835 1189 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 RNF34Q969K3 372 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 MYLPFQ96A32 169 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 HDAC11Q96DB2 347 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 P2RY11Q96G91 374 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 PCED1BQ96HM7 432 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 SMOQ99835 787 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 SIKE1Q9BRV8 207 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 COLEC11Q9BWP8 271 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 TSSK1BQ9BXA7 367 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 OSBPL2Q9H1P3 480 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 FAM96AQ9H5X1 160 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 LRRC40Q9H9A6 602 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 SAR1AQ9NR31 198 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 DDIT4Q9NX09 232 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 NSMCE4AQ9NXX6 385 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 BFARQ9NZS9 450 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 PCDHB11Q9Y5F2 797 aa7.83□□□□□ -1.16
CCDC171-205ENST00000472806 SYNJ2BP-COX16A0A087WUM0 186 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 MYBPHLA2RUH7 354 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 MYADML2A6NDP7 307 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 CASTOR2A6NHX0 329 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 FOXO6A8MYZ6 492 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 INPPL1O15357 1258 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 FGF10O15520 208 aaPredicted RBP7.82□□□□□ -1.16
CCDC171-205ENST00000472806 MGRN1O60291 552 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 ADAMTS4O75173 837 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 GLRA3O75311 464 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 AVILO75366 819 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 B3GAT3O94766 335 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 UNC5CO95185 931 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 EOMESO95936 686 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 ASGR1P07306 291 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 USP17L7P0C7H9 530 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 CCNB1P14635 433 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 VAV1P15498 845 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 ERCC2P18074 760 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 ADRA1DP25100 572 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 HOXD10P28358 340 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 CRHR1P34998 444 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 HADHAP40939 763 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 SERPINB4P48594 390 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 CXCR3P49682 368 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 MNAT1P51948 309 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 ARFIP2P53365 341 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 NCALDP61601 193 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 SNRPNP63162 240 aaKnown RBP7.82□□□□□ -1.16
CCDC171-205ENST00000472806 PPIDQ08752 370 aaKnown RBP7.82□□□□□ -1.16
CCDC171-205ENST00000472806 MGAT5Q09328 741 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 SEMA3BQ13214 749 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 CLN3Q13286 438 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 MTA1Q13330 715 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 DSC3Q14574 896 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 INSCQ1MX18 579 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 TMEM259Q4ZIN3 620 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 TIGD5Q53EQ6 642 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 ACBD5Q5T8D3 534 aaPredicted RBP7.82□□□□□ -1.16
CCDC171-205ENST00000472806 GRTP1Q5TC63 336 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 OTUD1Q5VV17 481 aaPredicted RBP7.82□□□□□ -1.16
CCDC171-205ENST00000472806 SYPL2Q5VXT5 272 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 OVOS1Q6IE37 1185 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 NAPEPLDQ6IQ20 393 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 AGMOQ6ZNB7 445 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 C1orf229Q6ZS94 237 aaPredicted RBP7.82□□□□□ -1.16
CCDC171-205ENST00000472806 ZNF534Q76KX8 674 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 OTOAQ7RTW8 1153 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 PID1Q7Z2X4 250 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 RNF180Q86T96 592 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 LINC00523Q86TU6 105 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 ECHDC2Q86YB7 292 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 LRRC49Q8IUZ0 686 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 DCP1BQ8IZD4 617 aaKnown RBP7.82□□□□□ -1.16
CCDC171-205ENST00000472806 PYROXD2Q8N2H3 581 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 ARHGAP18Q8N392 663 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 GSTCDQ8NEC7 633 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 KLHDC9Q8NEP7 349 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 TRPV1Q8NER1 839 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 GABPB2Q8TAK5 448 aaPredicted RBP7.82□□□□□ -1.16
CCDC171-205ENST00000472806 URGCPQ8TCY9 931 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 PPP1R13LQ8WUF5 828 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 C10orf82Q8WW14 230 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 HHIPL1Q96JK4 782 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 FAM111AQ96PZ2 611 aa7.82□□□□□ -1.16
CCDC171-205ENST00000472806 TMEM237Q96Q45 408 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms