RNA–Protein interactions for RNA: ENST00000472559.5

UQCC1-215, Transcript of ubiquinol-cytochrome c reductase complex assembly factor 1, human

TSL 1 (best)

Gene UQCC1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UQCC1-215	ENST00000472559	CNTF	P26441	200 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	PTPN4	P29074	926 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	EPHB2	P29323	1055 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	ZNF157	P51786	506 aa	Predicted RBP	13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	TPI1	P60174	286 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	PPID	Q08752	370 aa	Known RBP	13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	GNAS	Q5JWF2	1037 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	BSPRY	Q5W0U4	402 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	CES3	Q6UWW8	571 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	SERINC5	Q86VE9	423 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	IFNL1	Q8IU54	200 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	NUDCD3	Q8IVD9	361 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	FAM13C	Q8NE31	585 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	OR52K1	Q8NGK4	314 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	SOCS4	Q8WXH5	440 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	EDEM1	Q92611	657 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	MYLPF	Q96A32	169 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	PGBD4	Q96DM1	585 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	MIPEP	Q99797	713 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	C20orf27	Q9GZN8	174 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	CSNK1G1	Q9HCP0	422 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	DDIT4	Q9NX09	232 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	TNPO2	O14787	897 aa	Known RBP	13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	BIRC5	O15392	142 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	PRKCG	P05129	697 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	CCND1	P24385	295 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	RPL9	P32969	192 aa	Known RBP	13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	CD68	P34810	354 aa	Predicted RBP	13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	CXCR3	P49682	368 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	TMPRSS15	P98073	1019 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	PDE1C	Q14123	709 aa	Predicted RBP	13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	SMAD1	Q15797	465 aa	Known RBP	13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	UPP1	Q16831	310 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	CMPK2	Q5EBM0	449 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	C16orf46	Q6P387	395 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	CCNJL	Q8IV13	435 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	NSL1	Q96IY1	281 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	PKMYT1	Q99640	499 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	MLPH	Q9BV36	600 aa	Predicted RBP	13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	TMLHE	Q9NVH6	421 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	RAD54B	Q9Y620	910 aa		13.49	□□□□□ -0.25
UQCC1-215	ENST00000472559	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	FCHO1	O14526	889 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	TPP1	O14773	563 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	ZBTB24	O43167	697 aa	Predicted RBP	13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	PGK1	P00558	417 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	ERVK-10	P10266	1014 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	CYBA	P13498	195 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	PAX3	P23760	479 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	GALNT2	Q10471	571 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	ZBTB17	Q13105	803 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	NAB1	Q13506	487 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	KRT72	Q14CN4	511 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	STXBP5	Q5T5C0	1151 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	FAM91A1	Q658Y4	838 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	ATG16L1	Q676U5	607 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	KCTD11	Q693B1	232 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	FAM171B	Q6P995	826 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	TTC7B	Q86TV6	843 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	ACMSD	Q8TDX5	336 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	LZIC	Q8WZA0	190 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	SMARCD1	Q96GM5	515 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	COLEC11	Q9BWP8	271 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	UPF3A	Q9H1J1	476 aa	Known RBP	13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	CASS4	Q9NQ75	786 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	IL1RAPL1	Q9NZN1	696 aa		13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	KLHL8	Q9P2G9	620 aa	Predicted RBP	13.48	□□□□□ -0.25
UQCC1-215	ENST00000472559	NUP205	Q92621	2012 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	USP12	O75317	370 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	AP2A1	O95782	977 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	GM2A	P17900	193 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	ABL2	P42684	1182 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	MAGEA10	P43363	369 aa	Predicted RBP	13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	BRCC3	P46736	316 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	DSC3	Q14574	896 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	SPANXN3	Q5MJ09	141 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	PM20D1	Q6GTS8	502 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	KYAT3	Q6YP21	454 aa	Known RBP	13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	PDZD4	Q76G19	769 aa	Predicted RBP	13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	RSPH3	Q86UC2	560 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	TAC4	Q86UU9	113 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	ALYREF	Q86V81	257 aa	Known RBP	13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	RASSF3	Q86WH2	238 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	RAB3IL1	Q8TBN0	382 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	DPF3	Q92784	378 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	TMEM209	Q96SK2	561 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	FERMT1	Q9BQL6	677 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	NAT9	Q9BTE0	207 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	CADM1	Q9BY67	442 aa	Known RBP	13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	TMEM165	Q9HC07	324 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	KCNK4	Q9NYG8	393 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	WDR37	Q9Y2I8	494 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	SHROOM3	Q8TF72	1996 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	HNRNPCL1	O60812	293 aa	Known RBP	13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	PEX11A	O75192	247 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	E2F6	O75461	281 aa		13.47	□□□□□ -0.25
UQCC1-215	ENST00000472559	ITGA2B	P08514	1039 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms