RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 PTPRN2Q92932 1015 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 NXPE2Q96DL1 559 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 TSG101Q99816 390 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 UCKL1Q9NWZ5 548 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 PCDHB1Q9Y5F3 818 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 SNX10Q9Y5X0 201 aa10.44□□□□□ -0.74
SCAMP3-205ENST00000472397 EDDM13A0A1B0GTR0 161 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 TYW5A2RUC4 315 aaKnown RBP10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 CAPN9O14815 690 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 SLC31A1O15431 190 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 SIGLEC6O43699 453 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 GRAP2O75791 330 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 ENDOD1O94919 500 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 GOT1P17174 413 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 GLDCP23378 1020 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 DRD3P35462 400 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 CLDN2P57739 230 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 YWHAEP62258 255 aaKnown RBP10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 INSM1Q01101 510 aaPredicted RBP10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 EDRF1Q3B7T1 1238 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 CCDC40Q4G0X9 1142 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 ATL3Q6DD88 541 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 FBXL19Q6PCT2 694 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 GJB7Q6PEY0 223 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 USP30Q70CQ3 517 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 TTC39CQ8N584 583 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 OR52K2Q8NGK3 314 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 NT5C1BQ96P26 610 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 PRORYQ9H606 182 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 DKK4Q9UBT3 224 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 ARMCX3Q9UH62 379 aaPredicted RBP10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 CYTH4Q9UIA0 394 aa10.43□□□□□ -0.74
SCAMP3-205ENST00000472397 CYSRT1A8MQ03 144 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 AGRPO00253 132 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 CASC3O15234 703 aaKnown RBP10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 MOCS3O95396 460 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 LATS1O95835 1130 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 ASLP04424 464 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 MPOP05164 745 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 MYL1P05976 194 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 CD44P16070 742 aaKnown RBP10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 ZNF18P17022 549 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 HNF1BP35680 557 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 FMO5P49326 533 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 CCR5P51681 352 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 STX17P56962 302 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 ZNF445P59923 1031 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 DAB2P98082 770 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 APBA1Q02410 837 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 CNTN1Q12860 1018 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 SFSWAPQ12872 951 aaKnown RBP10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 CNGA2Q16280 664 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 CRTC1Q6UUV9 634 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 Q6ZVU0 165 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 PRPF39Q86UA1 669 aaKnown RBP10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 PASD1Q8IV76 773 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 CCAR2Q8N163 923 aaKnown RBP10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 IRGQQ8WZA9 623 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 TSC1Q92574 1164 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 RNF34Q969K3 372 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 SLC35C1Q96A29 364 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 SKA1Q96BD8 255 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 SLC39A13Q96H72 371 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 KREMEN1Q96MU8 473 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 UBL7Q96S82 380 aaPredicted RBP10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 GTPBP4Q9BZE4 634 aaKnown RBP10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 FAM204AQ9H8W3 233 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 FBRSQ9HAH7 460 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 CPNE5Q9HCH3 593 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 ARHGAP20Q9P2F6 1191 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 COQ4Q9Y3A0 265 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 MYLKQ15746 1914 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 SMG1Q96Q15 3661 aaKnown RBP10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 DOCK9Q9BZ29 2069 aa10.42□□□□□ -0.74
SCAMP3-205ENST00000472397 ITIH6Q6UXX5 1313 aa10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 FAM237AA0A1B0GTK4 181 aa10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 TARSL2A2RTX5 802 aaKnown RBP10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 E5RJQ4 531 aa10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 K7ERQ8 282 aa10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 RRP8O43159 456 aaKnown RBP10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 IRAK2O43187 625 aa10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 PAPSS1O43252 624 aaPredicted RBP10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 RNGTTO60942 597 aaKnown RBP10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 NEBLO76041 1014 aa10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 LETM1O95202 739 aaPredicted RBP10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 TRUB2O95900 331 aaKnown RBP10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 MT-CO3P00414 261 aa10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 APOEP02649 317 aa10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 SRPRAP08240 638 aaKnown RBP10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 PAEPP09466 180 aa10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 C5AR1P21730 350 aa10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 ARRB1P49407 418 aaPredicted RBP10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 STAT4Q14765 748 aa10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 SLC45A4Q5BKX6 768 aa10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 MPP7Q5T2T1 576 aa10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 NAPEPLDQ6IQ20 393 aa10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 KANSL1Q7Z3B3 1105 aa10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 C14orf80Q86SX3 495 aa10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 CREBRFQ8IUR6 639 aa10.41□□□□□ -0.74
SCAMP3-205ENST00000472397 SLC25A45Q8N413 288 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms