RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	KAT2B	Q92831	832 aa		4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	HVCN1	Q96D96	273 aa		4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	MPP4	Q96JB8	637 aa		4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	SEC62	Q99442	399 aa	Known RBP	4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	PHF7	Q9BWX1	381 aa	Predicted RBP	4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	TRIM31	Q9BZY9	425 aa		4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	SEMA4C	Q9C0C4	833 aa		4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	UNC45A	Q9H3U1	944 aa		4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	JMJD4	Q9H9V9	463 aa		4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	FLRT1	Q9NZU1	646 aa		4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	SUFU	Q9UMX1	484 aa		4.22	□□□□□ -1.73
PTCD3-209	ENST00000472044	FAM90A7P	A6NKC0	464 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	FAM90A22P	A8MWA6	464 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	FAM90A12P	A8MX19	464 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	FAM90A23P	A8MXZ1	464 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044		J3KRW8	73 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	INPPL1	O15357	1258 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	CCNT1	O60563	726 aa	Known RBP	4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	TULP3	O75386	442 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	WDHD1	O75717	1129 aa	Predicted RBP	4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	HLA-DQA2	P01906	255 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	IFIT1	P09914	478 aa	Known RBP	4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	LYL1	P12980	280 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	CYP4B1	P13584	511 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	TFEB	P19484	476 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	CERS1	P27544	350 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	HMGA2	P52926	109 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	SLC12A2	P55011	1212 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	RHAG	Q02094	409 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	MTA1	Q13330	715 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	BAK1	Q16611	211 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	GXYLT1	Q4G148	440 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	TMEM119	Q4V9L6	283 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	RUNDC3A	Q59EK9	446 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	EARS2	Q5JPH6	523 aa	Known RBP	4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	AADACL2	Q6P093	401 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	GALNT16	Q8N428	558 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	LSM14A	Q8ND56	463 aa	Known RBP	4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	DPF1	Q92782	380 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	ADAD1	Q96M93	576 aa	Known RBP	4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	C5orf34	Q96MH7	638 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	KRTAP17-1	Q9BYP8	105 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	STN1	Q9H668	368 aa	Known RBP	4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	TMEM248	Q9NWD8	314 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	TBX20	Q9UMR3	447 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	WDR17	Q8IZU2	1322 aa		4.21	□□□□□ -1.74
PTCD3-209	ENST00000472044	GOLGA6L10	A0A0M3HER8	536 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	MANSC4	A6NHS7	340 aa	Predicted RBP	4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	SH2D7	A6NKC9	451 aa	Predicted RBP	4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044		A6NLC8	198 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	PEX12	O00623	359 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	GUCY1B2	O75343	617 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	RBMXL2	O75526	392 aa	Known RBP	4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	CD63	P08962	238 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	ST6GAL1	P15907	406 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	GSTM2	P28161	218 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	GJC1	P36383	396 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	PGM1	P36871	562 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	LIFR	P42702	1097 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	ARHGAP8	P85298	464 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	CFHR1	Q03591	330 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	GOLGA8F	Q08AF8	430 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	DDX10	Q13206	875 aa	Known RBP	4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	PLK5	Q496M5	336 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	KIAA1755	Q5JYT7	1200 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	C10orf76	Q5T2E6	689 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	GJB7	Q6PEY0	223 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	SLC30A9	Q6PML9	568 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	ZNF66	Q6ZN08	573 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	ARL14EP	Q8N8R7	260 aa	Predicted RBP	4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	C2CD4C	Q8TF44	421 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	NCSTN	Q92542	709 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	STAM	Q92783	540 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	RNFT2	Q96EX2	444 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	FUZ	Q9BT04	418 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	AGXT2	Q9BYV1	514 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	IL21R	Q9HBE5	538 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	TLR8	Q9NR97	1041 aa	Known RBP	4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	SLC25A13	Q9UJS0	675 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	TNFSF13B	Q9Y275	285 aa		4.2	□□□□□ -1.74
PTCD3-209	ENST00000472044	SLC22A23	A1A5C7	686 aa		4.19	□□□□□ -1.74
PTCD3-209	ENST00000472044	TMEM247	A6NEH6	219 aa		4.19	□□□□□ -1.74
PTCD3-209	ENST00000472044	C17orf100	A8MU93	164 aa		4.19	□□□□□ -1.74
PTCD3-209	ENST00000472044	PPP6C	O00743	305 aa		4.19	□□□□□ -1.74
PTCD3-209	ENST00000472044	EPB41L2	O43491	1005 aa	Known RBP	4.19	□□□□□ -1.74
PTCD3-209	ENST00000472044	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
PTCD3-209	ENST00000472044	WEE2	P0C1S8	567 aa		4.19	□□□□□ -1.74
PTCD3-209	ENST00000472044	ELF1	P32519	619 aa		4.19	□□□□□ -1.74
PTCD3-209	ENST00000472044	HNF1B	P35680	557 aa		4.19	□□□□□ -1.74
PTCD3-209	ENST00000472044	STAT1	P42224	750 aa		4.19	□□□□□ -1.74
PTCD3-209	ENST00000472044	GPD2	P43304	727 aa		4.19	□□□□□ -1.74
PTCD3-209	ENST00000472044	NR1H2	P55055	460 aa		4.19	□□□□□ -1.74
PTCD3-209	ENST00000472044	YPEL5	P62699	121 aa		4.19	□□□□□ -1.74
PTCD3-209	ENST00000472044	MPP1	Q00013	466 aa		4.19	□□□□□ -1.74
PTCD3-209	ENST00000472044	ZBTB16	Q05516	673 aa		4.19	□□□□□ -1.74
PTCD3-209	ENST00000472044	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
PTCD3-209	ENST00000472044	BYSL	Q13895	437 aa	Known RBP	4.19	□□□□□ -1.74
PTCD3-209	ENST00000472044	HEATR4	Q86WZ0	1026 aa		4.19	□□□□□ -1.74
PTCD3-209	ENST00000472044	KLB	Q86Z14	1044 aa		4.19	□□□□□ -1.74
PTCD3-209	ENST00000472044	BRSK2	Q8IWQ3	736 aa		4.19	□□□□□ -1.74

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