RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 TASP1Q9H6P5 420 aa6.22□□□□□ -1.41
CCDC39-202ENST00000471307 INO80Q9ULG1 1556 aaPredicted RBP6.22□□□□□ -1.41
CCDC39-202ENST00000471307 ZMYM4Q5VZL5 1548 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 ZFYVE16Q7Z3T8 1539 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 KAT7O95251 611 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 CER1O95813 267 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 WNT1P04628 370 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 CYP3A4P08684 503 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 POLD2P49005 469 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 HTR6P50406 440 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 PGGT1BP53609 377 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 TBX4P57082 545 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 IL31Q6EBC2 164 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 TTLL5Q6EMB2 1281 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 B4GALNT4Q76KP1 1039 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 GATAD2AQ86YP4 633 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 ADGRF3Q8IZF5 1079 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 PELI3Q8N2H9 469 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 TP63Q9H3D4 680 aaPredicted RBP6.21□□□□□ -1.42
CCDC39-202ENST00000471307 EPS8L2Q9H6S3 715 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 ANAPC4Q9UJX5 808 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 LAMP3Q9UQV4 416 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 ZBTB1Q9Y2K1 713 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 ERBINQ96RT1 1412 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 HECW2Q9P2P5 1572 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 CLSPNQ9HAW4 1339 aa6.21□□□□□ -1.42
CCDC39-202ENST00000471307 CYP3A7-CYP3A51PA0A087WV96 503 aa6.2□□□□□ -1.42
CCDC39-202ENST00000471307 A0A1W2PPC1 479 aa6.2□□□□□ -1.42
CCDC39-202ENST00000471307 CYP3A7P24462 503 aa6.2□□□□□ -1.42
CCDC39-202ENST00000471307 NANOS2P60321 138 aaKnown RBP6.2□□□□□ -1.42
CCDC39-202ENST00000471307 SEMA3AQ14563 771 aa6.2□□□□□ -1.42
CCDC39-202ENST00000471307 TTC39AQ5SRH9 613 aa6.2□□□□□ -1.42
CCDC39-202ENST00000471307 C6orf10Q5SRN2 563 aa6.2□□□□□ -1.42
CCDC39-202ENST00000471307 ANKRD40Q6AI12 368 aa6.2□□□□□ -1.42
CCDC39-202ENST00000471307 RINT1Q6NUQ1 792 aa6.2□□□□□ -1.42
CCDC39-202ENST00000471307 SRLQ86TD4 932 aa6.2□□□□□ -1.42
CCDC39-202ENST00000471307 SYTL1Q8IYJ3 562 aa6.2□□□□□ -1.42
CCDC39-202ENST00000471307 FAM186BQ8IYM0 893 aa6.2□□□□□ -1.42
CCDC39-202ENST00000471307 EXD3Q8N9H8 876 aa6.2□□□□□ -1.42
CCDC39-202ENST00000471307 IPO4Q8TEX9 1081 aaKnown RBP6.2□□□□□ -1.42
CCDC39-202ENST00000471307 MUL1Q969V5 352 aa6.2□□□□□ -1.42
CCDC39-202ENST00000471307 TMEM41AQ96HV5 264 aa6.2□□□□□ -1.42
CCDC39-202ENST00000471307 REXO5Q96IC2 774 aaKnown RBP6.2□□□□□ -1.42
CCDC39-202ENST00000471307 PRPF18Q99633 342 aaKnown RBP6.2□□□□□ -1.42
CCDC39-202ENST00000471307 MLXIPQ9HAP2 919 aa6.2□□□□□ -1.42
CCDC39-202ENST00000471307 ZNF580Q9UK33 172 aa6.2□□□□□ -1.42
CCDC39-202ENST00000471307 UTS2RQ9UKP6 389 aa6.2□□□□□ -1.42
CCDC39-202ENST00000471307 ATP10AO60312 1499 aa6.2□□□□□ -1.42
CCDC39-202ENST00000471307 A2MP01023 1474 aa6.2□□□□□ -1.42
CCDC39-202ENST00000471307 DHX57Q6P158 1386 aaKnown RBP6.19□□□□□ -1.42
CCDC39-202ENST00000471307 FRMPD1Q5SYB0 1578 aa6.19□□□□□ -1.42
CCDC39-202ENST00000471307 KDM6BO15054 1643 aa6.19□□□□□ -1.42
CCDC39-202ENST00000471307 RHODO00212 210 aa6.19□□□□□ -1.42
CCDC39-202ENST00000471307 SMAD6O43541 496 aaKnown RBP6.19□□□□□ -1.42
CCDC39-202ENST00000471307 LARGE1O95461 756 aa6.19□□□□□ -1.42
CCDC39-202ENST00000471307 LCKP06239 509 aa6.19□□□□□ -1.42
CCDC39-202ENST00000471307 CBSLP0DN79 551 aa6.19□□□□□ -1.42
CCDC39-202ENST00000471307 ABCB4P21439 1286 aa6.19□□□□□ -1.42
CCDC39-202ENST00000471307 CBSP35520 551 aa6.19□□□□□ -1.42
CCDC39-202ENST00000471307 NEK3P51956 506 aa6.19□□□□□ -1.42
CCDC39-202ENST00000471307 TAS2R50P59544 299 aa6.19□□□□□ -1.42
CCDC39-202ENST00000471307 RPL15P61313 204 aaKnown RBP6.19□□□□□ -1.42
CCDC39-202ENST00000471307 PTGR1Q14914 329 aa6.19□□□□□ -1.42
CCDC39-202ENST00000471307 ZNF549Q6P9A3 640 aa6.19□□□□□ -1.42
CCDC39-202ENST00000471307 CYB5R4Q7L1T6 521 aa6.19□□□□□ -1.42
CCDC39-202ENST00000471307 TXNRD2Q9NNW7 524 aa6.19□□□□□ -1.42
CCDC39-202ENST00000471307 ARFGAP3Q9NP61 516 aa6.19□□□□□ -1.42
CCDC39-202ENST00000471307 NLRC4Q9NPP4 1024 aa6.19□□□□□ -1.42
CCDC39-202ENST00000471307 IGSF9Q9P2J2 1179 aa6.19□□□□□ -1.42
CCDC39-202ENST00000471307 LMTK3Q96Q04 1460 aa6.19□□□□□ -1.42
CCDC39-202ENST00000471307 NUP155O75694 1391 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 GOLGA6L3A6NEY3 463 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 PIP5K1BO14986 540 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 RPP40O75818 363 aaKnown RBP6.18□□□□□ -1.42
CCDC39-202ENST00000471307 IFNA2P01563 188 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 CDC25AP30304 524 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 CIITAP33076 1130 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 GRK5P34947 590 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 TECP42680 631 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 FOXL2P58012 376 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 RBM6P78332 1123 aaKnown RBP6.18□□□□□ -1.42
CCDC39-202ENST00000471307 ERV3-1Q14264 604 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 TRIM60Q495X7 471 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 ZNF569Q5MCW4 686 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 ERAP2Q6P179 960 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 TMEM199Q8N511 208 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 ACRBPQ8NEB7 543 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 LPAR1Q92633 364 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 EME1Q96AY2 570 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 C18orf8Q96DM3 657 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 MCRS1Q96EZ8 462 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 SPAG4Q9NPE6 437 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 FNIP2Q9P278 1114 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 DIP2CQ9Y2E4 1556 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 KANK1Q14678 1352 aa6.18□□□□□ -1.42
CCDC39-202ENST00000471307 EIF2AK4Q9P2K8 1649 aaKnown RBP6.17□□□□□ -1.42
CCDC39-202ENST00000471307 YEATS2Q9ULM3 1422 aa6.17□□□□□ -1.42
CCDC39-202ENST00000471307 GAGE12JA6NER3 117 aa6.17□□□□□ -1.42
CCDC39-202ENST00000471307 FOXO6A8MYZ6 492 aa6.17□□□□□ -1.42
CCDC39-202ENST00000471307 M0QYT0 321 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms