RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 SRSF11Q05519 484 aaKnown RBP8.2□□□□□ -1.1
SMC4-212ENST00000470240 OVGP1Q12889 678 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 NME3Q13232 169 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 STX3Q13277 289 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 GAS6Q14393 721 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 LBRQ14739 615 aaKnown RBP8.2□□□□□ -1.1
SMC4-212ENST00000470240 PAFAH1B3Q15102 231 aaKnown RBP8.2□□□□□ -1.1
SMC4-212ENST00000470240 MAPRE1Q15691 268 aaKnown RBP8.2□□□□□ -1.1
SMC4-212ENST00000470240 CCDC6Q16204 474 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 MDH1BQ5I0G3 518 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 FAM91A1Q658Y4 838 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 STEAP4Q687X5 459 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 OLFML2BQ68BL8 750 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 RFX8Q6ZV50 586 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 MTDHQ86UE4 582 aaKnown RBP8.2□□□□□ -1.1
SMC4-212ENST00000470240 LONP2Q86WA8 852 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 CCDC185Q8N715 623 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 STKLD1Q8NE28 680 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 GABPB2Q8TAK5 448 aaPredicted RBP8.2□□□□□ -1.1
SMC4-212ENST00000470240 SLC7A14Q8TBB6 771 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 CLEC4CQ8WTT0 213 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 SMARCD1Q96GM5 515 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 OXNAD1Q96HP4 312 aaPredicted RBP8.2□□□□□ -1.1
SMC4-212ENST00000470240 OLFM3Q96PB7 478 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 SLC2A13Q96QE2 648 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 MYCBPQ99417 103 aaPredicted RBP8.2□□□□□ -1.1
SMC4-212ENST00000470240 NPY6RQ99463 290 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 APBA2Q99767 749 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 SLC13A1Q9BZW2 595 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 MMADHCQ9H3L0 296 aaPredicted RBP8.2□□□□□ -1.1
SMC4-212ENST00000470240 LRRC40Q9H9A6 602 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 CHST12Q9NRB3 414 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 THAP1Q9NVV9 213 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 DDX43Q9NXZ2 648 aaKnown RBP8.2□□□□□ -1.1
SMC4-212ENST00000470240 COX16Q9P0S2 106 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 ZFATQ9P243 1243 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 HEY2Q9UBP5 337 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 MCM8Q9UJA3 840 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 ADAM28Q9UKQ2 775 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 DSEQ9UL01 958 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 SORCS3Q9UPU3 1222 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 PHF24Q9UPV7 400 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 GNEQ9Y223 722 aaKnown RBP8.2□□□□□ -1.1
SMC4-212ENST00000470240 C15orf41Q9Y2V0 281 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 TRPV2Q9Y5S1 764 aa8.2□□□□□ -1.1
SMC4-212ENST00000470240 MAGEB16A2A368 324 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 WDR27A2RRH5 827 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 MANSC4A6NHS7 340 aaPredicted RBP8.19□□□□□ -1.1
SMC4-212ENST00000470240 C9IYK1 514 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 GPR182O15218 404 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 NEBLO76041 1014 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 MAP3K6O95382 1288 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 THP07101 528 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 BPGMP07738 259 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 FGFR1P11362 822 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 AKR1A1P14550 325 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 GRK2P25098 689 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 LMO2P25791 158 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 SPRP35270 261 aaPredicted RBP8.19□□□□□ -1.1
SMC4-212ENST00000470240 GP5P40197 560 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 HADHAP40939 763 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 HCAR3P49019 387 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 SERPINB8P50452 374 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 CDK7P50613 346 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 RAB27AP51159 221 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 TKTL1P51854 596 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 GJA9P57773 515 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 SESN2P58004 480 aaPredicted RBP8.19□□□□□ -1.1
SMC4-212ENST00000470240 MRPS6P82932 125 aaKnown RBP8.19□□□□□ -1.1
SMC4-212ENST00000470240 MXRA7P84157 204 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 SCAPQ12770 1279 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 FRG1Q14331 258 aaKnown RBP8.19□□□□□ -1.1
SMC4-212ENST00000470240 CHI3L2Q15782 390 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 FSCN1Q16658 493 aaKnown RBP8.19□□□□□ -1.1
SMC4-212ENST00000470240 INSCQ1MX18 579 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 CCDC153Q494R4 210 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 DNAL1Q4LDG9 190 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 RAB6CQ53S08 254 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 GRTP1Q5TC63 336 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 MROH9Q5TGP6 573 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 BSPRYQ5W0U4 402 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 PID1Q7Z2X4 250 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 LIMS2Q7Z4I7 341 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 LINC00523Q86TU6 105 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 FAM35AQ86V20 835 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 TMEM130Q8N3G9 435 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 DNAAF3Q8N9W5 541 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 PPFIBP2Q8ND30 876 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 C1orf216Q8TAB5 229 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 AGAP11Q8TF27 550 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 IRGQQ8WZA9 623 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 RNF34Q969K3 372 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 P2RY11Q96G91 374 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 SIGLEC10Q96LC7 697 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 SENP8Q96LD8 212 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 RILPQ96NA2 401 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 CPNE1Q99829 537 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 BTBD10Q9BSF8 475 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 SYT17Q9BSW7 474 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 RAB6CQ9H0N0 254 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms