RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 CBFA2T3O75081 653 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 PAGE1O75459 146 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 PDGFRAP16234 1089 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 TFE3P19532 575 aaPredicted RBP16.8■□□□□ 0.28
COL9A3-208ENST00000469802 SPINK2P20155 84 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 CD27P26842 260 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 MZF1P28698 734 aaPredicted RBP16.8■□□□□ 0.28
COL9A3-208ENST00000469802 GRIA4P48058 902 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 CXCR3P49682 368 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 OXCT1P55809 520 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 SULT2A1Q06520 285 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 NME3Q13232 169 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 ELAVL3Q14576 367 aaKnown RBP16.8■□□□□ 0.28
COL9A3-208ENST00000469802 CDKAL1Q5VV42 579 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 RNF219Q5W0B1 726 aaPredicted RBP16.8■□□□□ 0.28
COL9A3-208ENST00000469802 IL27RAQ6UWB1 636 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 OR52K2Q8NGK3 314 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 EPS8L1Q8TE68 723 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 FRS2Q8WU20 508 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 PGAP3Q96FM1 320 aaPredicted RBP16.8■□□□□ 0.28
COL9A3-208ENST00000469802 RPL10LQ96L21 214 aaKnown RBP16.8■□□□□ 0.28
COL9A3-208ENST00000469802 CAMK1GQ96NX5 476 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 RPRD1AQ96P16 312 aaPredicted RBP16.8■□□□□ 0.28
COL9A3-208ENST00000469802 FAM129BQ96TA1 746 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 SCNM1Q9BWG6 230 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 GANQ9H2C0 597 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 TM9SF3Q9HD45 589 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 ANLNQ9NQW6 1124 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 FBXL12Q9NXK8 326 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 ARHGEF38Q9NXL2 777 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 VANGL2Q9ULK5 521 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 OR51B4Q9Y5P0 310 aa16.8■□□□□ 0.28
COL9A3-208ENST00000469802 COL5A1P20908 1838 aaPredicted RBP16.8■□□□□ 0.28
COL9A3-208ENST00000469802 PLXNB3Q9ULL4 1909 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 A0A1B0GVT2 93 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 A0A1W2PP55 124 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 KRT37O76014 449 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 LSM8O95777 96 aaKnown RBP16.79■□□□□ 0.28
COL9A3-208ENST00000469802 GGCXP38435 758 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 CSNK1EP49674 416 aaKnown RBP16.79■□□□□ 0.28
COL9A3-208ENST00000469802 HLA-BQ31612 363 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 BRMS1LQ5PSV4 323 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 KIAA0895LQ68EN5 471 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 UNQ6494/PRO21346Q6UXR6 183 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 BNIPLQ7Z465 357 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 NOP9Q86U38 636 aaKnown RBP16.79■□□□□ 0.28
COL9A3-208ENST00000469802 XYLT1Q86Y38 959 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 MMAAQ8IVH4 418 aaKnown RBP16.79■□□□□ 0.28
COL9A3-208ENST00000469802 ZNF683Q8IZ20 524 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 AADATQ8N5Z0 425 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 BAHD1Q8TBE0 780 aaPredicted RBP16.79■□□□□ 0.28
COL9A3-208ENST00000469802 ENOX1Q8TC92 643 aaKnown RBP16.79■□□□□ 0.28
COL9A3-208ENST00000469802 GATA6Q92908 595 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 RNF34Q969K3 372 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 FAM131CQ96AQ9 280 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 C18orf8Q96DM3 657 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 FEM1AQ9BSK4 669 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 STK33Q9BYT3 514 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 GAREM1Q9H706 876 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 TAB2Q9NYJ8 693 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.79■□□□□ 0.28
COL9A3-208ENST00000469802 STAP1Q9ULZ2 295 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 NCKAP1Q9Y2A7 1128 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 TBC1D30Q9Y2I9 924 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 NEUROG3Q9Y4Z2 214 aa16.79■□□□□ 0.28
COL9A3-208ENST00000469802 C1QTNF9BB2RNN3 333 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 HYAL3O43820 417 aaPredicted RBP16.78■□□□□ 0.28
COL9A3-208ENST00000469802 CLDN11O75508 207 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 FSBPO95073 299 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 ADCY5O95622 1261 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 ADH1BP00325 375 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 PROS1P07225 676 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 C1QTNF9P0C862 333 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 VAV1P15498 845 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 SLC8A1P32418 973 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 GALCP54803 685 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 NOMO3P69849 1222 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 SFSWAPQ12872 951 aaKnown RBP16.78■□□□□ 0.28
COL9A3-208ENST00000469802 KIF19Q2TAC6 998 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 ARTNQ5T4W7 220 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 TRNP1Q6NT89 227 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 DBX2Q6ZNG2 339 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 C14orf80Q86SX3 495 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 GLRX5Q86SX6 157 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 STK40Q8N2I9 435 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 GPT2Q8TD30 523 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 NEUROG2Q9H2A3 272 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 NOCTQ9UK39 431 aaKnown RBP16.78■□□□□ 0.28
COL9A3-208ENST00000469802 PCOLCE2Q9UKZ9 415 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 PCDHGB2Q9Y5G2 931 aa16.78■□□□□ 0.28
COL9A3-208ENST00000469802 PES1O00541 588 aaKnown RBP16.77■□□□□ 0.28
COL9A3-208ENST00000469802 ATP9BO43861 1147 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 RNASEH2AO75792 299 aaKnown RBP16.77■□□□□ 0.28
COL9A3-208ENST00000469802 TRIM16O95361 564 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 C5AR1P21730 350 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 DRD3P35462 400 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 FLT3P36888 993 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 ANP32AP39687 249 aaKnown RBP16.77■□□□□ 0.28
COL9A3-208ENST00000469802 PSMD8P48556 350 aa16.77■□□□□ 0.28
COL9A3-208ENST00000469802 NUMBP49757 651 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms