RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 AP4E1Q9UPM8 1137 aa8.8□□□□□ -1
SSBP1-208ENST00000469123 PLXND1Q9Y4D7 1925 aa8.8□□□□□ -1
SSBP1-208ENST00000469123 FAM170AA1A519 330 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 BTNL10A8MVZ5 291 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 I6L893 689 aaPredicted RBP8.79□□□□□ -1
SSBP1-208ENST00000469123 K7ESF4 209 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 SRGAP2O75044 1071 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 ZNF217O75362 1048 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 PROSCO94903 275 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 NDUFA10O95299 355 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 C7P10643 843 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 EPHB2P29323 1055 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 CD70P32970 193 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 ARL4AP40617 200 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 CSKP41240 450 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 NBL1P41271 181 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 MAGEA1P43355 309 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 YBEYP58557 167 aaPredicted RBP8.79□□□□□ -1
SSBP1-208ENST00000469123 TPI1P60174 286 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 ECT2LQ008S8 904 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 ZBTB16Q05516 673 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 SLC20A2Q08357 652 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 ZNF252P-AS1Q0IIN9 211 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 MESP2Q0VG99 397 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 SEMA3BQ13214 749 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 ZNF234Q14588 700 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 DPYSL2Q16555 572 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 FNDC3BQ53EP0 1204 aaKnown RBP8.79□□□□□ -1
SSBP1-208ENST00000469123 SH3PXD2AQ5TCZ1 1133 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 EGFLAMQ63HQ2 1017 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 CXorf57Q6NSI4 855 aaKnown RBP8.79□□□□□ -1
SSBP1-208ENST00000469123 RETSATQ6NUM9 610 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 RWDD4Q6NW29 188 aaKnown RBP8.79□□□□□ -1
SSBP1-208ENST00000469123 POLNQ7Z5Q5 900 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 C14orf80Q86SX3 495 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 NLRP14Q86W24 1093 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 RASSF3Q86WH2 238 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 MAP7D3Q8IWC1 876 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 LZTR1Q8N653 840 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 RTL3Q8N8U3 475 aaKnown RBP8.79□□□□□ -1
SSBP1-208ENST00000469123 ZBTB44Q8NCP5 570 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 ATOH1Q92858 354 aaPredicted RBP8.79□□□□□ -1
SSBP1-208ENST00000469123 P2RY11Q96G91 374 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 CCDC114Q96M63 670 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 FEM1AQ9BSK4 669 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 SNRNP25Q9BV90 132 aaKnown RBP8.79□□□□□ -1
SSBP1-208ENST00000469123 MUC3BQ9H195 1237 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 MAGEH1Q9H213 219 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 TMEM245Q9H330 911 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 GRPEL1Q9HAV7 217 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 PRDM16Q9HAZ2 1276 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 ANLNQ9NQW6 1124 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 SLC25A13Q9UJS0 675 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 VPS28Q9UK41 221 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 CLEC4EQ9ULY5 219 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 HPCAL4Q9UM19 191 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 PCDHA13Q9Y5I0 950 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 EPN1Q9Y6I3 576 aaPredicted RBP8.79□□□□□ -1
SSBP1-208ENST00000469123 STON1Q9Y6Q2 735 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 NUP205Q92621 2012 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 RIF1Q5UIP0 2472 aaKnown RBP8.79□□□□□ -1
SSBP1-208ENST00000469123 FAM186AA6NE01 2351 aa8.79□□□□□ -1
SSBP1-208ENST00000469123 EDDM13A0A1B0GTR0 161 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 TARSL2A2RTX5 802 aaKnown RBP8.78□□□□□ -1
SSBP1-208ENST00000469123 ZNF487B1APH4 448 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 PROB1E7EW31 1015 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 H3BRJ5 948 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 SGK1O00141 431 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 EEF2KO00418 725 aaKnown RBP8.78□□□□□ -1
SSBP1-208ENST00000469123 TRIM24O15164 1050 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 AXIN1O15169 862 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 RAMP2O60895 175 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 RNASEH1O60930 286 aaKnown RBP8.78□□□□□ -1
SSBP1-208ENST00000469123 LILRB5O75023 590 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 ADAM23O75077 832 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 SERPINB6P35237 376 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 MRE11P49959 708 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 GNA12Q03113 381 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 PDK2Q15119 407 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 IFI16Q16666 785 aaKnown RBP8.78□□□□□ -1
SSBP1-208ENST00000469123 PARP15Q460N3 678 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 USP39Q53GS9 565 aaKnown RBP8.78□□□□□ -1
SSBP1-208ENST00000469123 ALFQ53S48 1182 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 FSCBQ5H9T9 825 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 LRRC38Q5VT99 294 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 TMEM215Q68D42 235 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 PKN3Q6P5Z2 889 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 RFX8Q6ZV50 586 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 CCDC33Q8N5R6 958 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 SLC35G2Q8TBE7 412 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 WFDC5Q8TCV5 224 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 CASKIN2Q8WXE0 1202 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 ARHGEF26Q96DR7 871 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 MYEOVQ96EZ4 313 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 SPACA7Q96KW9 195 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 CEP44Q9C0F1 390 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 DHX35Q9H5Z1 703 aaKnown RBP8.78□□□□□ -1
SSBP1-208ENST00000469123 MPP6Q9NZW5 540 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 ZNF212Q9UDV6 495 aa8.78□□□□□ -1
SSBP1-208ENST00000469123 PCSK1NQ9UHG2 260 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms