RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 TRAF3IP3Q9Y228 551 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.16□□□□□ -1.42
SHQ1-205ENST00000468371 A8MUI8 341 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 F5H5T6 163 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 P4HA2O15460 535 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 PJA2O43164 708 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 GPR37L1O60883 481 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 DCTN3O75935 186 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 RHOBTB1O94844 696 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 FAM163BP0C2L3 166 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 UBTFL6P0CB48 400 aaPredicted RBP6.16□□□□□ -1.42
SHQ1-205ENST00000468371 DRD1P21728 446 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 SDHBP21912 280 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 DRD4P21917 467 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 NFKBIAP25963 317 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 MAGEA11P43364 429 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 SLC5A3P53794 718 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 CREB5Q02930 508 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 ZNF177Q13360 481 aaPredicted RBP6.16□□□□□ -1.42
SHQ1-205ENST00000468371 ZACNQ401N2 412 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 LRRC23Q53EV4 343 aaPredicted RBP6.16□□□□□ -1.42
SHQ1-205ENST00000468371 EFHC1Q5JVL4 640 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 RABGAP1LQ5R372 815 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 IZUMO3Q5VZ72 239 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 YTHDF3Q7Z739 585 aaKnown RBP6.16□□□□□ -1.42
SHQ1-205ENST00000468371 GSTCDQ8NEC7 633 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 ELSPBP1Q96BH3 223 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 CFAP57Q96MR6 1250 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 RC3H2Q9HBD1 1191 aaKnown RBP6.16□□□□□ -1.42
SHQ1-205ENST00000468371 GTSE1Q9NYZ3 720 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 PPARGC1AQ9UBK2 798 aaKnown RBP6.16□□□□□ -1.42
SHQ1-205ENST00000468371 CTNNAL1Q9UBT7 734 aa6.16□□□□□ -1.42
SHQ1-205ENST00000468371 G3BP2Q9UN86 482 aaKnown RBP6.16□□□□□ -1.42
SHQ1-205ENST00000468371 FOXN3O00409 490 aaPredicted RBP6.15□□□□□ -1.42
SHQ1-205ENST00000468371 TGFB1I1O43294 461 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 MT-ND3P03897 115 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 TBX4P57082 545 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 BASP1P80723 227 aaKnown RBP6.15□□□□□ -1.42
SHQ1-205ENST00000468371 KLC1Q07866 573 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 ANGPT1Q15389 498 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 SLC9A9Q8IVB4 645 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 ZBED8Q8IZ13 594 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 OR10T2Q8NGX3 314 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 SHKBP1Q8TBC3 707 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 DNAJC9Q8WXX5 260 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 SYN2Q92777 582 aaPredicted RBP6.15□□□□□ -1.42
SHQ1-205ENST00000468371 RPRD1AQ96P16 312 aaPredicted RBP6.15□□□□□ -1.42
SHQ1-205ENST00000468371 PLK2Q9NYY3 685 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 TXNDC16Q9P2K2 825 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 TSPAN16Q9UKR8 245 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 R4GN57 208 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 MICAL3Q7RTP6 2002 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 SPECC1L-ADORA2AF8WAN1 911 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 NARSO43776 548 aaKnown RBP6.15□□□□□ -1.42
SHQ1-205ENST00000468371 ABLIM3O94929 683 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 LMNAP02545 664 aaKnown RBP6.15□□□□□ -1.42
SHQ1-205ENST00000468371 KRT1P04264 644 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 ADH5P11766 374 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 KRT10P13645 584 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 PHBP35232 272 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 ITGA8P53708 1063 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 ADIGQ0VDE8 80 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.15□□□□□ -1.42
SHQ1-205ENST00000468371 DSG4Q86SJ6 1040 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 DENND1CQ8IV53 801 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 C12orf56Q8IXR9 622 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 TEKT4Q8WW24 435 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 PIGKQ92643 395 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 NAF1Q96HR8 494 aaKnown RBP6.15□□□□□ -1.42
SHQ1-205ENST00000468371 C11orf70Q9BRQ4 267 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 GTPBP2Q9BX10 602 aaKnown RBP6.15□□□□□ -1.42
SHQ1-205ENST00000468371 STK33Q9BYT3 514 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 ULBP1Q9BZM6 244 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 VCX3BQ9H321 246 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 CDC42EP4Q9H3Q1 356 aaKnown RBP6.15□□□□□ -1.42
SHQ1-205ENST00000468371 ABCC13Q9NSE7 274 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 DDIT4Q9NX09 232 aa6.15□□□□□ -1.42
SHQ1-205ENST00000468371 DDX3XO00571 662 aaKnown RBP eCLIP6.15□□□□□ -1.43
SHQ1-205ENST00000468371 AXIN1O15169 862 aa6.15□□□□□ -1.43
SHQ1-205ENST00000468371 B4GALT3O60512 393 aa6.15□□□□□ -1.43
SHQ1-205ENST00000468371 HAUS5O94927 633 aa6.15□□□□□ -1.43
SHQ1-205ENST00000468371 ASS1P00966 412 aaKnown RBP6.15□□□□□ -1.43
SHQ1-205ENST00000468371 CYP11A1P05108 521 aa6.15□□□□□ -1.43
SHQ1-205ENST00000468371 INHBAP08476 426 aa6.15□□□□□ -1.43
SHQ1-205ENST00000468371 ZCCHC18P0CG32 403 aa6.15□□□□□ -1.43
SHQ1-205ENST00000468371 RPL21P46778 160 aaKnown RBP6.15□□□□□ -1.43
SHQ1-205ENST00000468371 DGKGP49619 791 aa6.15□□□□□ -1.43
SHQ1-205ENST00000468371 GPR15P49685 360 aa6.15□□□□□ -1.43
SHQ1-205ENST00000468371 OXCT1P55809 520 aa6.15□□□□□ -1.43
SHQ1-205ENST00000468371 GPS1Q13098 491 aa6.15□□□□□ -1.43
SHQ1-205ENST00000468371 CDO1Q16878 200 aa6.15□□□□□ -1.43
SHQ1-205ENST00000468371 SLC45A4Q5BKX6 768 aa6.15□□□□□ -1.43
SHQ1-205ENST00000468371 FAM102AQ5T9C2 384 aaPredicted RBP6.15□□□□□ -1.43
SHQ1-205ENST00000468371 THEMIS2Q5TEJ8 643 aa6.15□□□□□ -1.43
SHQ1-205ENST00000468371 SLC39A4Q6P5W5 647 aa6.15□□□□□ -1.43
SHQ1-205ENST00000468371 PIGZQ86VD9 579 aa6.15□□□□□ -1.43
SHQ1-205ENST00000468371 C1orf210Q8IVY1 113 aa6.15□□□□□ -1.43
SHQ1-205ENST00000468371 C12orf29Q8N999 325 aa6.15□□□□□ -1.43
SHQ1-205ENST00000468371 PYROXD1Q8WU10 500 aa6.15□□□□□ -1.43
SHQ1-205ENST00000468371 SLC20A1Q8WUM9 679 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms