RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 LRIG2O94898 1065 aa20.58■□□□□ 0.89
NPHP4-206ENST00000468253 FECHP22830 423 aa20.58■□□□□ 0.89
NPHP4-206ENST00000468253 MZF1P28698 734 aaPredicted RBP20.58■□□□□ 0.89
NPHP4-206ENST00000468253 MIPP30301 263 aa20.58■□□□□ 0.89
NPHP4-206ENST00000468253 OR1E1P30953 314 aa20.58■□□□□ 0.89
NPHP4-206ENST00000468253 WASP42768 502 aa20.58■□□□□ 0.89
NPHP4-206ENST00000468253 ZNF135P52742 658 aaPredicted RBP20.58■□□□□ 0.89
NPHP4-206ENST00000468253 ST8SIA6P61647 398 aa20.58■□□□□ 0.89
NPHP4-206ENST00000468253 BYSLQ13895 437 aaKnown RBP20.58■□□□□ 0.89
NPHP4-206ENST00000468253 USP39Q53GS9 565 aaKnown RBP20.58■□□□□ 0.89
NPHP4-206ENST00000468253 FAM72AQ5TYM5 149 aa20.58■□□□□ 0.89
NPHP4-206ENST00000468253 FAM72DQ6L9T8 149 aa20.58■□□□□ 0.89
NPHP4-206ENST00000468253 SERPINA13PQ6UXR4 307 aa20.58■□□□□ 0.89
NPHP4-206ENST00000468253 METTL3Q86U44 580 aaKnown RBP20.58■□□□□ 0.89
NPHP4-206ENST00000468253 FAM72BQ86X60 149 aa20.58■□□□□ 0.89
NPHP4-206ENST00000468253 APCDD1Q8J025 514 aa20.58■□□□□ 0.89
NPHP4-206ENST00000468253 CYB5D2Q8WUJ1 264 aa20.58■□□□□ 0.89
NPHP4-206ENST00000468253 NKD2Q969F2 451 aaPredicted RBP20.58■□□□□ 0.89
NPHP4-206ENST00000468253 ARHGEF26Q96DR7 871 aa20.58■□□□□ 0.89
NPHP4-206ENST00000468253 EPC1Q9H2F5 836 aa20.58■□□□□ 0.89
NPHP4-206ENST00000468253 FBRSQ9HAH7 460 aa20.58■□□□□ 0.89
NPHP4-206ENST00000468253 DONSONQ9NYP3 566 aa20.58■□□□□ 0.89
NPHP4-206ENST00000468253 ERVW-1Q9UQF0 538 aa20.58■□□□□ 0.89
NPHP4-206ENST00000468253 CXorf51AA0A1B0GTR3 108 aa20.57■□□□□ 0.88
NPHP4-206ENST00000468253 PRPSAP2O60256 369 aa20.57■□□□□ 0.88
NPHP4-206ENST00000468253 LRCH4O75427 683 aa20.57■□□□□ 0.88
NPHP4-206ENST00000468253 LCA5LO95447 670 aa20.57■□□□□ 0.88
NPHP4-206ENST00000468253 HOXC13P31276 330 aa20.57■□□□□ 0.88
NPHP4-206ENST00000468253 PXNP49023 591 aaPredicted RBP20.57■□□□□ 0.88
NPHP4-206ENST00000468253 MAPKAPK2P49137 400 aa20.57■□□□□ 0.88
NPHP4-206ENST00000468253 SEMA3BQ13214 749 aa20.57■□□□□ 0.88
NPHP4-206ENST00000468253 CAMK2GQ13555 558 aaPredicted RBP20.57■□□□□ 0.88
NPHP4-206ENST00000468253 TCEAL1Q15170 157 aa20.57■□□□□ 0.88
NPHP4-206ENST00000468253 FNDC3BQ53EP0 1204 aaKnown RBP20.57■□□□□ 0.88
NPHP4-206ENST00000468253 RNF219Q5W0B1 726 aaPredicted RBP20.57■□□□□ 0.88
NPHP4-206ENST00000468253 ANO7Q6IWH7 933 aa20.57■□□□□ 0.88
NPHP4-206ENST00000468253 C11orf74Q86VG3 221 aa20.57■□□□□ 0.88
NPHP4-206ENST00000468253 NLRP14Q86W24 1093 aa20.57■□□□□ 0.88
NPHP4-206ENST00000468253 TMTC1Q8IUR5 882 aa20.57■□□□□ 0.88
NPHP4-206ENST00000468253 GAB3Q8WWW8 586 aa20.57■□□□□ 0.88
NPHP4-206ENST00000468253 TBC1D31Q96DN5 1066 aa20.57■□□□□ 0.88
NPHP4-206ENST00000468253 MRGPRX3Q96LB0 322 aa20.57■□□□□ 0.88
NPHP4-206ENST00000468253 MAGEB5Q9BZ81 275 aa20.57■□□□□ 0.88
NPHP4-206ENST00000468253 TMEM248Q9NWD8 314 aa20.57■□□□□ 0.88
NPHP4-206ENST00000468253 USP18Q9UMW8 372 aa20.57■□□□□ 0.88
NPHP4-206ENST00000468253 KIAA1549LQ6ZVL6 1849 aa20.57■□□□□ 0.88
NPHP4-206ENST00000468253 TCRBV21S2A2A0A5A6 115 aa20.56■□□□□ 0.88
NPHP4-206ENST00000468253 WASH4PA8MWX3 477 aa20.56■□□□□ 0.88
NPHP4-206ENST00000468253 LMNAP02545 664 aaKnown RBP20.56■□□□□ 0.88
NPHP4-206ENST00000468253 RHOCP08134 193 aa20.56■□□□□ 0.88
NPHP4-206ENST00000468253 NNMTP40261 264 aa20.56■□□□□ 0.88
NPHP4-206ENST00000468253 HCAR3P49019 387 aa20.56■□□□□ 0.88
NPHP4-206ENST00000468253 KRT83P78385 493 aa20.56■□□□□ 0.88
NPHP4-206ENST00000468253 SLC20A2Q08357 652 aa20.56■□□□□ 0.88
NPHP4-206ENST00000468253 KIAA1211LQ6NV74 962 aa20.56■□□□□ 0.88
NPHP4-206ENST00000468253 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.56■□□□□ 0.88
NPHP4-206ENST00000468253 MDGA1Q8NFP4 955 aa20.56■□□□□ 0.88
NPHP4-206ENST00000468253 OR52K2Q8NGK3 314 aa20.56■□□□□ 0.88
NPHP4-206ENST00000468253 MYO19Q96H55 970 aa20.56■□□□□ 0.88
NPHP4-206ENST00000468253 EPAS1Q99814 870 aa20.56■□□□□ 0.88
NPHP4-206ENST00000468253 CTTNBP2NLQ9P2B4 639 aa20.56■□□□□ 0.88
NPHP4-206ENST00000468253 ANAPC7Q9UJX3 599 aa20.56■□□□□ 0.88
NPHP4-206ENST00000468253 TARSL2A2RTX5 802 aaKnown RBP20.55■□□□□ 0.88
NPHP4-206ENST00000468253 RPP40O75818 363 aaKnown RBP20.55■□□□□ 0.88
NPHP4-206ENST00000468253 EPHX1P07099 455 aa20.55■□□□□ 0.88
NPHP4-206ENST00000468253 GABRG2P18507 467 aa20.55■□□□□ 0.88
NPHP4-206ENST00000468253 PRKCHP24723 683 aa20.55■□□□□ 0.88
NPHP4-206ENST00000468253 ETFBP38117 255 aa20.55■□□□□ 0.88
NPHP4-206ENST00000468253 HNRNPA1L2Q32P51 320 aaKnown RBP20.55■□□□□ 0.88
NPHP4-206ENST00000468253 RWDD4Q6NW29 188 aaKnown RBP20.55■□□□□ 0.88
NPHP4-206ENST00000468253 SUMF1Q8NBK3 374 aa20.55■□□□□ 0.88
NPHP4-206ENST00000468253 ZNF564Q8TBZ8 553 aaPredicted RBP20.55■□□□□ 0.88
NPHP4-206ENST00000468253 HMGB4Q8WW32 186 aa20.55■□□□□ 0.88
NPHP4-206ENST00000468253 ZC3H10Q96K80 434 aaKnown RBP20.55■□□□□ 0.88
NPHP4-206ENST00000468253 PHOX2BQ99453 314 aa20.55■□□□□ 0.88
NPHP4-206ENST00000468253 C2orf49Q9BVC5 232 aaPredicted RBP20.55■□□□□ 0.88
NPHP4-206ENST00000468253 PACSIN1Q9BY11 444 aa20.55■□□□□ 0.88
NPHP4-206ENST00000468253 SPTLC3Q9NUV7 552 aa20.55■□□□□ 0.88
NPHP4-206ENST00000468253 PCSK1NQ9UHG2 260 aa20.55■□□□□ 0.88
NPHP4-206ENST00000468253 VPS28Q9UK41 221 aa20.55■□□□□ 0.88
NPHP4-206ENST00000468253 NEU3Q9UQ49 428 aa20.55■□□□□ 0.88
NPHP4-206ENST00000468253 RIF1Q5UIP0 2472 aaKnown RBP20.55■□□□□ 0.88
NPHP4-206ENST00000468253 ZNF217O75362 1048 aa20.54■□□□□ 0.88
NPHP4-206ENST00000468253 MTA2O94776 668 aa20.54■□□□□ 0.88
NPHP4-206ENST00000468253 EPHB2P29323 1055 aa20.54■□□□□ 0.88
NPHP4-206ENST00000468253 ARHGAP25P42331 645 aa20.54■□□□□ 0.88
NPHP4-206ENST00000468253 SIM2Q14190 667 aaPredicted RBP20.54■□□□□ 0.88
NPHP4-206ENST00000468253 CYP4V2Q6ZWL3 525 aaPredicted RBP20.54■□□□□ 0.88
NPHP4-206ENST00000468253 TFAP2DQ7Z6R9 452 aa20.54■□□□□ 0.88
NPHP4-206ENST00000468253 RHOT2Q8IXI1 618 aa20.54■□□□□ 0.88
NPHP4-206ENST00000468253 PYROXD2Q8N2H3 581 aa20.54■□□□□ 0.88
NPHP4-206ENST00000468253 OR2T3Q8NH03 318 aa20.54■□□□□ 0.88
NPHP4-206ENST00000468253 TEKT4Q8WW24 435 aa20.54■□□□□ 0.88
NPHP4-206ENST00000468253 MRGPRX1Q96LB2 322 aa20.54■□□□□ 0.88
NPHP4-206ENST00000468253 MUC3BQ9H195 1237 aa20.54■□□□□ 0.88
NPHP4-206ENST00000468253 MAGEH1Q9H213 219 aa20.54■□□□□ 0.88
NPHP4-206ENST00000468253 CATSPERBQ9H7T0 1116 aa20.54■□□□□ 0.88
NPHP4-206ENST00000468253 PRSS16Q9NQE7 514 aa20.54■□□□□ 0.88
NPHP4-206ENST00000468253 BCCIPQ9P287 314 aaKnown RBP eCLIP20.54■□□□□ 0.88
NPHP4-206ENST00000468253 SLCO3A1Q9UIG8 710 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms