RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, human

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMC4-208	ENST00000467468	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.57	□□□□□ -1.68
SMC4-208	ENST00000467468	PTCHD4	Q6ZW05	846 aa		4.57	□□□□□ -1.68
SMC4-208	ENST00000467468	NGEF	Q8N5V2	710 aa		4.57	□□□□□ -1.68
SMC4-208	ENST00000467468	PNLDC1	Q8NA58	520 aa	Known RBP	4.57	□□□□□ -1.68
SMC4-208	ENST00000467468	CREB3L4	Q8TEY5	395 aa		4.57	□□□□□ -1.68
SMC4-208	ENST00000467468	CTHRC1	Q96CG8	243 aa		4.57	□□□□□ -1.68
SMC4-208	ENST00000467468	VPS50	Q96JG6	964 aa		4.57	□□□□□ -1.68
SMC4-208	ENST00000467468	FYTTD1	Q96QD9	318 aa	Known RBP	4.57	□□□□□ -1.68
SMC4-208	ENST00000467468	MACROD1	Q9BQ69	325 aa		4.57	□□□□□ -1.68
SMC4-208	ENST00000467468	SDF4	Q9BRK5	362 aa		4.57	□□□□□ -1.68
SMC4-208	ENST00000467468	ARHGAP39	Q9C0H5	1083 aa		4.57	□□□□□ -1.68
SMC4-208	ENST00000467468	LMAN2L	Q9H0V9	348 aa		4.57	□□□□□ -1.68
SMC4-208	ENST00000467468	TAOK3	Q9H2K8	898 aa		4.57	□□□□□ -1.68
SMC4-208	ENST00000467468	STN1	Q9H668	368 aa	Known RBP	4.57	□□□□□ -1.68
SMC4-208	ENST00000467468	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.57	□□□□□ -1.68
SMC4-208	ENST00000467468	IL21R	Q9HBE5	538 aa		4.57	□□□□□ -1.68
SMC4-208	ENST00000467468	PCDHA10	Q9Y5I2	948 aa		4.57	□□□□□ -1.68
SMC4-208	ENST00000467468	TBC1D3D	A0A087WVF3	549 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	TBC1D3I	A0A087WXS9	549 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	TBC1D3E	A0A087X179	549 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	TBC1D3K	A0A087X1G2	549 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	CCDC187	A0A096LP49	1063 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	TBC1D3B	A6NDS4	549 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	AGAP5	A6NIR3	686 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	TBC1D3L	B9A6J9	549 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	BTBD19	C9JJ37	291 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468		H3BNC9	293 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	ANP32C	O43423	234 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	SPRY2	O43597	315 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	DHX16	O60231	1041 aa	Known RBP	4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	DOK2	O60496	412 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	TULP3	O75386	442 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	GCAT	O75600	419 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	TBC1D3H	P0C7X1	549 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	ALAD	P13716	330 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	CREB1	P16220	341 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	ADRA1D	P25100	572 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	PSMA4	P25789	261 aa	Known RBP	4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	MCM5	P33992	734 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	GRK5	P34947	590 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	PAFAH1B1	P43034	410 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	GPD2	P43304	727 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	PCP4	P48539	62 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	FOXL2	P58012	376 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	ARF3	P61204	181 aa	Predicted RBP	4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	ARF1	P84077	181 aa	Known RBP	4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	SET	Q01105	290 aa	Predicted RBP	4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	CBFB	Q13951	182 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	LRRC24	Q50LG9	513 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	SNX30	Q5VWJ9	437 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	TBC1D3G	Q6DHY5	549 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	TBC1D3C	Q6IPX1	549 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	ACSM6	Q6P461	480 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	C16orf89	Q6UX73	402 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	GALNT5	Q7Z7M9	940 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	NFKBID	Q8NI38	313 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	ZCCHC10	Q8TBK6	192 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	DDB2	Q92466	427 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	ARRDC3	Q96B67	414 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	MMS19	Q96T76	1030 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	CCDC68	Q9H2F9	335 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	GHITM	Q9H3K2	345 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	RAB21	Q9UL25	225 aa		4.56	□□□□□ -1.68
SMC4-208	ENST00000467468	PTP4A3	O75365	173 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	TIPRL	O75663	272 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	SGPL1	O95470	568 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	TUBB4A	P04350	444 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	CLEC3B	P05452	202 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	ALOX12	P18054	663 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	FPR3	P25089	353 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	LMO1	P25800	156 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	EPHA8	P29322	1005 aa	Predicted RBP	4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	EPHB2	P29323	1055 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	GGT5	P36269	586 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	TAS2R50	P59544	299 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	POU5F1	Q01860	360 aa	Known RBP	4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	PTP4A2	Q12974	167 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	DNASE1L3	Q13609	305 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	EIF4A2	Q14240	407 aa	Known RBP	4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	NFIL3	Q16649	462 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	FAM69A	Q5T7M9	428 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	PDXDC1	Q6P996	788 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	CCDC129	Q6ZRS4	1044 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	CHSY1	Q86X52	802 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	P3H2	Q8IVL5	708 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	DIS3L2	Q8IYB7	885 aa	Known RBP	4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	GLMP	Q8WWB7	406 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	TRMT61A	Q96FX7	289 aa	Known RBP	4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	MASTL	Q96GX5	879 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	CCDC17	Q96LX7	622 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	INTS2	Q9H0H0	1204 aa	Known RBP	4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	PDCL3	Q9H2J4	239 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	ANKEF1	Q9NU02	776 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	PPP1R14D	Q9NXH3	145 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	TAS2R10	Q9NYW0	307 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	TBC1D14	Q9P2M4	693 aa		4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.55	□□□□□ -1.68
SMC4-208	ENST00000467468	CD207	Q9UJ71	328 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms