RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 PRR11Q96HE9 360 aaPredicted RBP9.81□□□□□ -0.84
APP-213ENST00000464867 APOLD1Q96LR9 279 aa9.81□□□□□ -0.84
APP-213ENST00000464867 SPOCK3Q9BQ16 436 aa9.81□□□□□ -0.84
APP-213ENST00000464867 DUSP23Q9BVJ7 150 aa9.81□□□□□ -0.84
APP-213ENST00000464867 RSPH9Q9H1X1 276 aaPredicted RBP9.81□□□□□ -0.84
APP-213ENST00000464867 NEUROG2Q9H2A3 272 aa9.81□□□□□ -0.84
APP-213ENST00000464867 SUV39H2Q9H5I1 410 aa9.81□□□□□ -0.84
APP-213ENST00000464867 DMAP1Q9NPF5 467 aaPredicted RBP9.81□□□□□ -0.84
APP-213ENST00000464867 IL37Q9NZH6 218 aa9.81□□□□□ -0.84
APP-213ENST00000464867 NCKIPSDQ9NZQ3 722 aa9.81□□□□□ -0.84
APP-213ENST00000464867 FZD4Q9ULV1 537 aa9.81□□□□□ -0.84
APP-213ENST00000464867 ENTPD2Q9Y5L3 495 aa9.81□□□□□ -0.84
APP-213ENST00000464867 CRYBG3Q68DQ2 2970 aa9.81□□□□□ -0.84
APP-213ENST00000464867 TBC1D3DA0A087WVF3 549 aa9.8□□□□□ -0.84
APP-213ENST00000464867 TBC1D3IA0A087WXS9 549 aa9.8□□□□□ -0.84
APP-213ENST00000464867 TBC1D3EA0A087X179 549 aa9.8□□□□□ -0.84
APP-213ENST00000464867 TBC1D3KA0A087X1G2 549 aa9.8□□□□□ -0.84
APP-213ENST00000464867 CCDC187A0A096LP49 1063 aa9.8□□□□□ -0.84
APP-213ENST00000464867 A0A1W2PP55 124 aa9.8□□□□□ -0.84
APP-213ENST00000464867 FAM92AA1XBS5 289 aa9.8□□□□□ -0.84
APP-213ENST00000464867 VPS37CA5D8V6 355 aaPredicted RBP9.8□□□□□ -0.84
APP-213ENST00000464867 TBC1D3FA6NER0 549 aaPredicted RBP9.8□□□□□ -0.84
APP-213ENST00000464867 A8MXQ7 604 aa9.8□□□□□ -0.84
APP-213ENST00000464867 TISP43B9A030 160 aa9.8□□□□□ -0.84
APP-213ENST00000464867 TBC1D3LB9A6J9 549 aa9.8□□□□□ -0.84
APP-213ENST00000464867 TBCAO75347 108 aaKnown RBP9.8□□□□□ -0.84
APP-213ENST00000464867 TCEA3O75764 348 aa9.8□□□□□ -0.84
APP-213ENST00000464867 PRPF6O94906 941 aaKnown RBP9.8□□□□□ -0.84
APP-213ENST00000464867 REC8O95072 547 aa9.8□□□□□ -0.84
APP-213ENST00000464867 CTDNEP1O95476 244 aa9.8□□□□□ -0.84
APP-213ENST00000464867 FAM163BP0C2L3 166 aa9.8□□□□□ -0.84
APP-213ENST00000464867 TBC1D3HP0C7X1 549 aa9.8□□□□□ -0.84
APP-213ENST00000464867 LIPCP11150 499 aa9.8□□□□□ -0.84
APP-213ENST00000464867 SLC5A2P31639 672 aa9.8□□□□□ -0.84
APP-213ENST00000464867 NUDT1P36639 197 aa9.8□□□□□ -0.84
APP-213ENST00000464867 PDE4CQ08493 712 aa9.8□□□□□ -0.84
APP-213ENST00000464867 KCNAB2Q13303 367 aa9.8□□□□□ -0.84
APP-213ENST00000464867 KCNJ12Q14500 433 aa9.8□□□□□ -0.84
APP-213ENST00000464867 C10orf120Q5SQS8 335 aa9.8□□□□□ -0.84
APP-213ENST00000464867 FHL5Q5TD97 284 aa9.8□□□□□ -0.84
APP-213ENST00000464867 DIEXFQ68CQ4 756 aaKnown RBP9.8□□□□□ -0.84
APP-213ENST00000464867 TBC1D3GQ6DHY5 549 aa9.8□□□□□ -0.84
APP-213ENST00000464867 TBC1D3CQ6IPX1 549 aa9.8□□□□□ -0.84
APP-213ENST00000464867 KLHDC10Q6PID8 442 aa9.8□□□□□ -0.84
APP-213ENST00000464867 SND1Q7KZF4 910 aaKnown RBP eCLIP9.8□□□□□ -0.841e-17■■□□□ 13.8
APP-213ENST00000464867 LIMS2Q7Z4I7 341 aa9.8□□□□□ -0.84
APP-213ENST00000464867 BRSK2Q8IWQ3 736 aa9.8□□□□□ -0.84
APP-213ENST00000464867 TBC1D3Q8IZP1 549 aaPredicted RBP9.8□□□□□ -0.84
APP-213ENST00000464867 RBBP8NLQ8NC74 664 aaPredicted RBP9.8□□□□□ -0.84
APP-213ENST00000464867 B3GALNT2Q8NCR0 500 aa9.8□□□□□ -0.84
APP-213ENST00000464867 OR14C36Q8NHC7 312 aa9.8□□□□□ -0.84
APP-213ENST00000464867 NOC3LQ8WTT2 800 aaKnown RBP9.8□□□□□ -0.84
APP-213ENST00000464867 KLHDC7BQ96G42 594 aa9.8□□□□□ -0.84
APP-213ENST00000464867 SMARCD1Q96GM5 515 aa9.8□□□□□ -0.84
APP-213ENST00000464867 PLIN2Q99541 437 aa9.8□□□□□ -0.84
APP-213ENST00000464867 REEP2Q9BRK0 252 aa9.8□□□□□ -0.84
APP-213ENST00000464867 B3GNT5Q9BYG0 378 aa9.8□□□□□ -0.84
APP-213ENST00000464867 MTMR12Q9C0I1 747 aa9.8□□□□□ -0.84
APP-213ENST00000464867 TMEM30AQ9NV96 361 aa9.8□□□□□ -0.84
APP-213ENST00000464867 NLGN3Q9NZ94 848 aa9.8□□□□□ -0.84
APP-213ENST00000464867 PLAAQ9Y263 795 aa9.8□□□□□ -0.84
APP-213ENST00000464867 PCDHGA7Q9Y5G6 932 aa9.8□□□□□ -0.84
APP-213ENST00000464867 ZFC3H1O60293 1989 aaKnown RBP9.8□□□□□ -0.84
APP-213ENST00000464867 A0A1W2PNU3 283 aaPredicted RBP9.79□□□□□ -0.84
APP-213ENST00000464867 CPED1A4D0V7 1026 aa9.79□□□□□ -0.84
APP-213ENST00000464867 MSTNO14793 375 aa9.79□□□□□ -0.84
APP-213ENST00000464867 TACC1O75410 805 aa9.79□□□□□ -0.84
APP-213ENST00000464867 STC2O76061 302 aa9.79□□□□□ -0.84
APP-213ENST00000464867 PROCP04070 461 aa9.79□□□□□ -0.84
APP-213ENST00000464867 TGM2P21980 687 aa9.79□□□□□ -0.84
APP-213ENST00000464867 ADH6P28332 368 aa9.79□□□□□ -0.84
APP-213ENST00000464867 OXCT1P55809 520 aa9.79□□□□□ -0.84
APP-213ENST00000464867 ST8SIA6P61647 398 aa9.79□□□□□ -0.84
APP-213ENST00000464867 TNNC1P63316 161 aa9.79□□□□□ -0.84
APP-213ENST00000464867 COG7P83436 770 aa9.79□□□□□ -0.84
APP-213ENST00000464867 CLCA4Q14CN2 919 aa9.79□□□□□ -0.84
APP-213ENST00000464867 TGIF1Q15583 401 aa9.79□□□□□ -0.84
APP-213ENST00000464867 ARSHQ5FYA8 562 aa9.79□□□□□ -0.84
APP-213ENST00000464867 TMEM215Q68D42 235 aa9.79□□□□□ -0.84
APP-213ENST00000464867 BORAQ6PGQ7 559 aa9.79□□□□□ -0.84
APP-213ENST00000464867 CHST9Q7L1S5 443 aa9.79□□□□□ -0.84
APP-213ENST00000464867 DSG4Q86SJ6 1040 aa9.79□□□□□ -0.84
APP-213ENST00000464867 GPBP1Q86WP2 473 aa9.79□□□□□ -0.84
APP-213ENST00000464867 C4orf32Q8N8J7 132 aa9.79□□□□□ -0.84
APP-213ENST00000464867 WDR48Q8TAF3 677 aa9.79□□□□□ -0.84
APP-213ENST00000464867 CXorf38Q8TB03 319 aa9.79□□□□□ -0.84
APP-213ENST00000464867 ARRDC3Q96B67 414 aa9.79□□□□□ -0.84
APP-213ENST00000464867 MRPL45Q9BRJ2 306 aaKnown RBP9.79□□□□□ -0.84
APP-213ENST00000464867 TM6SF1Q9BZW5 370 aa9.79□□□□□ -0.84
APP-213ENST00000464867 TSPAN10Q9H1Z9 355 aaPredicted RBP9.79□□□□□ -0.84
APP-213ENST00000464867 SIX4Q9UIU6 781 aa9.79□□□□□ -0.84
APP-213ENST00000464867 TUBD1Q9UJT1 453 aa9.79□□□□□ -0.84
APP-213ENST00000464867 ZNF232Q9UNY5 417 aa9.79□□□□□ -0.84
APP-213ENST00000464867 EXOC7Q9UPT5 735 aa9.79□□□□□ -0.84
APP-213ENST00000464867 DMTF1Q9Y222 760 aa9.79□□□□□ -0.84
APP-213ENST00000464867 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.78□□□□□ -0.84
APP-213ENST00000464867 MID1O15344 667 aa9.78□□□□□ -0.84
APP-213ENST00000464867 NOBOXO60393 691 aa9.78□□□□□ -0.84
APP-213ENST00000464867 DLDP09622 509 aaKnown RBP9.78□□□□□ -0.84
APP-213ENST00000464867 RARGP13631 454 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms