RNA–Protein interactions for RNA: ENST00000464628.1

SCAF8-205, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-205ENST00000464628 IFT43Q96FT9 208 aa11.8□□□□□ -0.52
SCAF8-205ENST00000464628 CCDC3Q9BQI4 270 aa11.8□□□□□ -0.52
SCAF8-205ENST00000464628 CALN1Q9BXU9 219 aa11.8□□□□□ -0.52
SCAF8-205ENST00000464628 SDCBP2Q9H190 292 aa11.8□□□□□ -0.52
SCAF8-205ENST00000464628 XYLT2Q9H1B5 865 aa11.8□□□□□ -0.52
SCAF8-205ENST00000464628 PCIF1Q9H4Z3 704 aa11.8□□□□□ -0.52
SCAF8-205ENST00000464628 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.8□□□□□ -0.52
SCAF8-205ENST00000464628 CLIC5Q9NZA1 410 aa11.8□□□□□ -0.52
SCAF8-205ENST00000464628 NCKIPSDQ9NZQ3 722 aa11.8□□□□□ -0.52
SCAF8-205ENST00000464628 PISDQ9UG56 409 aa11.8□□□□□ -0.52
SCAF8-205ENST00000464628 SALL4Q9UJQ4 1053 aa11.8□□□□□ -0.52
SCAF8-205ENST00000464628 STOML2Q9UJZ1 356 aa11.8□□□□□ -0.52
SCAF8-205ENST00000464628 INTS6Q9UL03 887 aaKnown RBP11.8□□□□□ -0.52
SCAF8-205ENST00000464628 PCDHA5Q9Y5H7 936 aa11.8□□□□□ -0.52
SCAF8-205ENST00000464628 SHANK1Q9Y566 2161 aa11.79□□□□□ -0.52
SCAF8-205ENST00000464628 TARSL2A2RTX5 802 aaKnown RBP11.79□□□□□ -0.52
SCAF8-205ENST00000464628 TTC34A8MYJ7 566 aa11.79□□□□□ -0.52
SCAF8-205ENST00000464628 C9orf172C9J069 976 aa11.79□□□□□ -0.52
SCAF8-205ENST00000464628 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.79□□□□□ -0.52
SCAF8-205ENST00000464628 MUSKO15146 869 aa11.79□□□□□ -0.52
SCAF8-205ENST00000464628 KRT18P05783 430 aaKnown RBP11.79□□□□□ -0.52
SCAF8-205ENST00000464628 ETV5P41161 510 aa11.79□□□□□ -0.52
SCAF8-205ENST00000464628 CASP5P51878 434 aa11.79□□□□□ -0.52
SCAF8-205ENST00000464628 AGBL4Q5VU57 503 aa11.79□□□□□ -0.52
SCAF8-205ENST00000464628 GCNT7Q6ZNI0 430 aa11.79□□□□□ -0.52
SCAF8-205ENST00000464628 TADA2BQ86TJ2 420 aa11.79□□□□□ -0.52
SCAF8-205ENST00000464628 ACOT1Q86TX2 421 aa11.79□□□□□ -0.52
SCAF8-205ENST00000464628 CBWD2Q8IUF1 395 aa11.79□□□□□ -0.52
SCAF8-205ENST00000464628 STK40Q8N2I9 435 aa11.79□□□□□ -0.52
SCAF8-205ENST00000464628 KDM1BQ8NB78 822 aa11.79□□□□□ -0.52
SCAF8-205ENST00000464628 NOC3LQ8WTT2 800 aaKnown RBP11.79□□□□□ -0.52
SCAF8-205ENST00000464628 JAKMIP2Q96AA8 810 aa11.79□□□□□ -0.52
SCAF8-205ENST00000464628 POM121Q96HA1 1249 aa11.79□□□□□ -0.52
SCAF8-205ENST00000464628 BOCQ9BWV1 1114 aa11.79□□□□□ -0.52
SCAF8-205ENST00000464628 PREBQ9HCU5 417 aa11.79□□□□□ -0.52
SCAF8-205ENST00000464628 FZD3Q9NPG1 666 aa11.79□□□□□ -0.52
SCAF8-205ENST00000464628 KIF3AQ9Y496 699 aa11.79□□□□□ -0.52
SCAF8-205ENST00000464628 EDDM13A0A1B0GTR0 161 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 A0A1W2PQ27 194 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 A0A1W2PQ64 194 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 A0A1W2PQC6 194 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 D6RAR5 112 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 SLC7A4O43246 635 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 EPB41L2O43491 1005 aaKnown RBP11.78□□□□□ -0.52
SCAF8-205ENST00000464628 REC8O95072 547 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 CCKBRP32239 447 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 CSKP41240 450 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 KIF11P52732 1056 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 ST8SIA6P61647 398 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 HNRNPKP61978 463 aaKnown RBP eCLIP11.78□□□□□ -0.521e-8■■■■■ 28.3
SCAF8-205ENST00000464628 KLRB1Q12918 225 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 NR0B2Q15466 257 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 TRIP4Q15650 581 aaPredicted RBP11.78□□□□□ -0.52
SCAF8-205ENST00000464628 DEFB133Q30KQ1 61 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 ABI3BPQ7Z7G0 1075 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 ZC3H18Q86VM9 953 aaKnown RBP11.78□□□□□ -0.52
SCAF8-205ENST00000464628 SLC35F3Q8IY50 421 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 RAD54LQ92698 747 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 PTPRN2Q92932 1015 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 PLD4Q96BZ4 506 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 ABHD17AQ96GS6 310 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 C8orf76Q96K31 380 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 TNIP3Q96KP6 325 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 ACCSQ96QU6 501 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 CDK5RAP1Q96SZ6 601 aaKnown RBP11.78□□□□□ -0.52
SCAF8-205ENST00000464628 FOXP3Q9BZS1 431 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 PNPLA8Q9NP80 782 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 DNAJC28Q9NX36 388 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 HMGXB4Q9UGU5 601 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 KLF15Q9UIH9 416 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 EXOC7Q9UPT5 735 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 LOXL2Q9Y4K0 774 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 USP3Q9Y6I4 520 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 CSNK1G3Q9Y6M4 447 aa11.78□□□□□ -0.52
SCAF8-205ENST00000464628 PRR19A6NJB7 356 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 DDAH2O95865 285 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 IL1BP01584 269 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 CSF2P04141 144 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 ASLP04424 464 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 JMJD7P0C870 316 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 FAM200BP0CF97 657 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 RALAP11233 206 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 NME1P15531 152 aaKnown RBP11.77□□□□□ -0.53
SCAF8-205ENST00000464628 PRLRP16471 622 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 CTSOP43234 321 aaPredicted RBP11.77□□□□□ -0.53
SCAF8-205ENST00000464628 TAS2R38P59533 333 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 ZNF445P59923 1031 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 MYL6P60660 151 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 SURF1Q15526 300 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 C12orf29Q8N999 325 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 GALNT11Q8NCW6 608 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 FGFBP2Q9BYJ0 223 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 SYNDIG1Q9H7V2 258 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 FAM49BQ9NUQ9 324 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 MARCH2Q9P0N8 246 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 RABGEF1Q9UJ41 708 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 PCDHB11Q9Y5F2 797 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 HIVEP3Q5T1R4 2406 aa11.77□□□□□ -0.53
SCAF8-205ENST00000464628 LRP4O75096 1905 aa11.76□□□□□ -0.53
SCAF8-205ENST00000464628 A0A087X0B3 334 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms