RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.35□□□□□ -0.27
XRN1-203ENST00000463916 SIGLEC16A6NMB1 481 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 TMCO5BA8MYB1 307 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 E9PAM4 449 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 SRGAP2O75044 1071 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 CLDN11O75508 207 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 ASLP04424 464 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 CALB1P05937 261 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 CCDC172P0C7W6 258 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 SKILP12757 684 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 VAV1P15498 845 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 TNFAIP3P21580 790 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 RRM1P23921 792 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 CD6P30203 668 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 PTPN9P43378 593 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 RPS14P62263 151 aaKnown RBP13.35□□□□□ -0.27
XRN1-203ENST00000463916 IRX4P78413 519 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 ZNF33AQ06730 810 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 ZNF177Q13360 481 aaPredicted RBP13.35□□□□□ -0.27
XRN1-203ENST00000463916 ASIC2Q16515 512 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 PPP1R15BQ5SWA1 713 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 C9orf64Q5T6V5 341 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 LYSMD4Q5XG99 296 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 C12orf50Q8NA57 414 aaPredicted RBP13.35□□□□□ -0.27
XRN1-203ENST00000463916 ZNF419Q96HQ0 510 aaPredicted RBP13.35□□□□□ -0.27
XRN1-203ENST00000463916 HAPLN3Q96S86 360 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 ZNF212Q9UDV6 495 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 PILRBQ9UKJ0 227 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 PAXBP1Q9Y5B6 917 aa13.35□□□□□ -0.27
XRN1-203ENST00000463916 LNP1A1A4G5 178 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 FAM72CH0Y354 149 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 MOCS3O95396 460 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 IGLV3-19P01714 112 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 SRPRAP08240 638 aaKnown RBP13.34□□□□□ -0.27
XRN1-203ENST00000463916 ADRA1BP35368 520 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 CDH4P55283 916 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 ST8SIA6P61647 398 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 SLC12A1Q13621 1099 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 PUM1Q14671 1186 aaKnown RBP eCLIP13.34□□□□□ -0.27
XRN1-203ENST00000463916 ARID5BQ14865 1188 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 AASDHQ4L235 1098 aaPredicted RBP13.34□□□□□ -0.27
XRN1-203ENST00000463916 FAM72AQ5TYM5 149 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 SFMBT2Q5VUG0 894 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 RNF219Q5W0B1 726 aaPredicted RBP13.34□□□□□ -0.27
XRN1-203ENST00000463916 FAM72DQ6L9T8 149 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 TFAP2DQ7Z6R9 452 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 FAM124AQ86V42 546 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 FAM72BQ86X60 149 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 CCDC185Q8N715 623 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 FAM172AQ8WUF8 416 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 HSPA12BQ96MM6 686 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 SELENOOQ9BVL4 669 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 GPR174Q9BXC1 333 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 SUN2Q9UH99 717 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 CDV3Q9UKY7 258 aaKnown RBP13.34□□□□□ -0.27
XRN1-203ENST00000463916 NUMA1Q14980 2115 aa13.34□□□□□ -0.27
XRN1-203ENST00000463916 A0A0D9SEW6 157 aa13.33□□□□□ -0.27
XRN1-203ENST00000463916 GOLGA6L19H0YKK7 550 aa13.33□□□□□ -0.27
XRN1-203ENST00000463916 DDX3XO00571 662 aaKnown RBP eCLIP13.33□□□□□ -0.272e-11■□□□□ 11.2
XRN1-203ENST00000463916 MAOBP27338 520 aa13.33□□□□□ -0.27
XRN1-203ENST00000463916 PRKCIP41743 596 aa13.33□□□□□ -0.27
XRN1-203ENST00000463916 OGDHQ02218 1023 aa13.33□□□□□ -0.27
XRN1-203ENST00000463916 FIGNQ5HY92 759 aa13.33□□□□□ -0.27
XRN1-203ENST00000463916 STRADAQ7RTN6 431 aa13.33□□□□□ -0.27
XRN1-203ENST00000463916 SYT12Q8IV01 421 aa13.33□□□□□ -0.27
XRN1-203ENST00000463916 KDM1BQ8NB78 822 aa13.33□□□□□ -0.27
XRN1-203ENST00000463916 PTPRN2Q92932 1015 aa13.33□□□□□ -0.27
XRN1-203ENST00000463916 MCEEQ96PE7 176 aa13.33□□□□□ -0.27
XRN1-203ENST00000463916 EDEM3Q9BZQ6 932 aa13.33□□□□□ -0.27
XRN1-203ENST00000463916 RSPH9Q9H1X1 276 aaPredicted RBP13.33□□□□□ -0.27
XRN1-203ENST00000463916 IFNKQ9P0W0 207 aa13.33□□□□□ -0.27
XRN1-203ENST00000463916 DCDC2BA2VCK2 349 aa13.33□□□□□ -0.28
XRN1-203ENST00000463916 ATMINO43313 823 aaPredicted RBP13.33□□□□□ -0.28
XRN1-203ENST00000463916 NDUFS2O75306 463 aa13.33□□□□□ -0.28
XRN1-203ENST00000463916 MT-CO1P00395 513 aa13.33□□□□□ -0.28
XRN1-203ENST00000463916 ACADMP11310 421 aa13.33□□□□□ -0.28
XRN1-203ENST00000463916 GPD1P21695 349 aa13.33□□□□□ -0.28
XRN1-203ENST00000463916 ACSL1P33121 698 aa13.33□□□□□ -0.28
XRN1-203ENST00000463916 TPM4P67936 248 aa13.33□□□□□ -0.28
XRN1-203ENST00000463916 DNAJC24Q6P3W2 148 aa13.33□□□□□ -0.28
XRN1-203ENST00000463916 LRRC31Q6UY01 552 aa13.33□□□□□ -0.28
XRN1-203ENST00000463916 NETO1Q8TDF5 533 aa13.33□□□□□ -0.28
XRN1-203ENST00000463916 FRS2Q8WU20 508 aa13.33□□□□□ -0.28
XRN1-203ENST00000463916 FAM129BQ96TA1 746 aa13.33□□□□□ -0.28
XRN1-203ENST00000463916 PSMB7Q99436 277 aa13.33□□□□□ -0.28
XRN1-203ENST00000463916 FSCN3Q9NQT6 498 aa13.33□□□□□ -0.28
XRN1-203ENST00000463916 OR12D3Q9UGF7 316 aa13.33□□□□□ -0.28
XRN1-203ENST00000463916 VPS28Q9UK41 221 aa13.33□□□□□ -0.28
XRN1-203ENST00000463916 ITIH6Q6UXX5 1313 aa13.33□□□□□ -0.28
XRN1-203ENST00000463916 DOCK4Q8N1I0 1966 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 KHNYNO15037 678 aaKnown RBP13.32□□□□□ -0.28
XRN1-203ENST00000463916 CCP110O43303 1012 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 FOXD2O60548 495 aaPredicted RBP13.32□□□□□ -0.28
XRN1-203ENST00000463916 SNAP91O60641 907 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 ZNF143P52747 638 aaPredicted RBP13.32□□□□□ -0.28
XRN1-203ENST00000463916 KLHL30Q0D2K2 578 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 MAMLD1Q13495 774 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 TRIM61Q5EBN2 209 aa13.32□□□□□ -0.28
XRN1-203ENST00000463916 PEAR1Q5VY43 1037 aaPredicted RBP13.32□□□□□ -0.28
XRN1-203ENST00000463916 HGSNATQ68CP4 663 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms