RNA–Protein interactions for RNA: ENST00000463837.5

CCDC88B-204, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 5,235 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-204ENST00000463837 HSMCR30P0CW71 290 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 ITGALP20701 1170 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 NEK3P51956 506 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 CES3Q6UWW8 571 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 LENG1Q96BZ8 264 aaPredicted RBP19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 MID1IP1Q9NPA3 183 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 HOXA2O43364 376 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 DDX39BQ13838 428 aaKnown RBP19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 FAM117BQ6P1L5 589 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 C16orf46Q6P387 395 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 C15orf52Q6ZUT6 534 aaKnown RBP19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 ZDHHC13Q8IUH4 622 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 FAM81AQ8TBF8 368 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 TMEM169Q96HH4 297 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 CCDC167Q9P0B6 97 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 TGDSO95455 350 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 KRT6AP02538 564 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 KRT6BP04259 564 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 TPH1P17752 444 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 KRT6CP48668 564 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 ALDH7A1P49419 539 aaKnown RBP19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 FKBP1AP62942 108 aaKnown RBP19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 HPCAP84074 193 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 HS6ST3Q8IZP7 471 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 AADATQ8N5Z0 425 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 SSU72Q9NP77 194 aaKnown RBP19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 DMTF1Q9Y222 760 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 AK5Q9Y6K8 562 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 RIMS1Q86UR5 1692 aaKnown RBP19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 GPR182O15218 404 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 CSDE1O75534 798 aaKnown RBP19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 RENBPP51606 427 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 FAM83AQ86UY5 434 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 RNF145Q96MT1 663 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 UBXN6Q9BZV1 441 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 SLCO1B3Q9NPD5 702 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 SCUBE2Q9NQ36 999 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 GAKO14976 1311 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 DCDC2CA8MYV0 355 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 TRUB2O95900 331 aaKnown RBP19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 UQCRBP14927 111 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 NRF1Q16656 503 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 ZNF470Q6ECI4 717 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 STK32CQ86UX6 486 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 PSTKQ8IV42 348 aaKnown RBP19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 ARRDC4Q8NCT1 418 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 DGCR14Q96DF8 476 aaKnown RBP19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 PTCD3Q96EY7 689 aaKnown RBP19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 ADGRE3Q9BY15 652 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 ENTPD7Q9NQZ7 604 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 RAP2CQ9Y3L5 183 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 UMODL1Q5DID0 1318 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 CCNG1P51959 295 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 OXCT1P55809 520 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 NOMO3P69849 1222 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 PTAR1Q7Z6K3 402 aaPredicted RBP19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 KRCC1Q9NPI7 259 aaPredicted RBP19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 ATXN10Q9UBB4 475 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 LGALS13Q9UHV8 139 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 MLNP12872 115 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 POU1F1P28069 291 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 RGS21Q2M5E4 152 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 ARMC4Q5T2S8 1044 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 MARC1Q5VT66 337 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 TTC23Q5W5X9 447 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 C8orf59Q8N0T1 100 aaPredicted RBP19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 FIG4Q92562 907 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 POP5Q969H6 163 aaKnown RBP19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 RGS18Q9NS28 235 aa19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 RSL24D1Q9UHA3 163 aaKnown RBP19.34■□□□□ 0.69
CCDC88B-204ENST00000463837 GSC2O15499 205 aa19.33■□□□□ 0.69
CCDC88B-204ENST00000463837 SNAP91O60641 907 aa19.33■□□□□ 0.69
CCDC88B-204ENST00000463837 PGM3O95394 542 aa19.33■□□□□ 0.69
CCDC88B-204ENST00000463837 IRF1P10914 325 aa19.33■□□□□ 0.69
CCDC88B-204ENST00000463837 APBA2Q99767 749 aa19.33■□□□□ 0.69
CCDC88B-204ENST00000463837 NT5MQ9NPB1 228 aa19.33■□□□□ 0.69
CCDC88B-204ENST00000463837 SPAG4Q9NPE6 437 aa19.33■□□□□ 0.69
CCDC88B-204ENST00000463837 EFR3BQ9Y2G0 817 aa19.33■□□□□ 0.69
CCDC88B-204ENST00000463837 KPNA1P52294 538 aaPredicted RBP19.33■□□□□ 0.69
CCDC88B-204ENST00000463837 BNIP2Q12982 314 aa19.33■□□□□ 0.69
CCDC88B-204ENST00000463837 BLMHQ13867 455 aa19.33■□□□□ 0.69
CCDC88B-204ENST00000463837 LRRC57Q8N9N7 239 aa19.33■□□□□ 0.69
CCDC88B-204ENST00000463837 C12orf50Q8NA57 414 aaPredicted RBP19.33■□□□□ 0.69
CCDC88B-204ENST00000463837 ITFG1Q8TB96 612 aa19.33■□□□□ 0.69
CCDC88B-204ENST00000463837 RNF157Q96PX1 679 aa19.33■□□□□ 0.69
CCDC88B-204ENST00000463837 EBNA1BP2Q99848 306 aaKnown RBP19.33■□□□□ 0.69
CCDC88B-204ENST00000463837 MTF2Q9Y483 593 aaPredicted RBP19.33■□□□□ 0.69
CCDC88B-204ENST00000463837 SESN1Q9Y6P5 492 aa19.33■□□□□ 0.69
CCDC88B-204ENST00000463837 TPP2P29144 1249 aaPredicted RBP19.33■□□□□ 0.68
CCDC88B-204ENST00000463837 TMEM132BQ14DG7 1078 aa19.33■□□□□ 0.68
CCDC88B-204ENST00000463837 ARHGAP17Q68EM7 881 aa19.33■□□□□ 0.68
CCDC88B-204ENST00000463837 ABRAXAS1Q6UWZ7 409 aa19.33■□□□□ 0.68
CCDC88B-204ENST00000463837 CERS2Q96G23 380 aa19.33■□□□□ 0.68
CCDC88B-204ENST00000463837 CPB2Q96IY4 423 aa19.33■□□□□ 0.68
CCDC88B-204ENST00000463837 PTPRHQ9HD43 1115 aa19.33■□□□□ 0.68
CCDC88B-204ENST00000463837 TAS2R13Q9NYV9 303 aa19.33■□□□□ 0.68
CCDC88B-204ENST00000463837 CLIC5Q9NZA1 410 aa19.33■□□□□ 0.68
CCDC88B-204ENST00000463837 TMCO1Q9UM00 188 aa19.33■□□□□ 0.68
CCDC88B-204ENST00000463837 BCL9O00512 1426 aa19.33■□□□□ 0.68
CCDC88B-204ENST00000463837 MEIS2O14770 477 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms