RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 C1QTNF3-AMACRE9PGA6 284 aa13.83□□□□□ -0.2
COMMD3-205ENST00000463688 ARHGAP33O14559 1287 aa13.83□□□□□ -0.2
COMMD3-205ENST00000463688 SERPINC1P01008 464 aa13.83□□□□□ -0.2
COMMD3-205ENST00000463688 CEACAM1P13688 526 aa13.83□□□□□ -0.2
COMMD3-205ENST00000463688 PDGFRAP16234 1089 aa13.83□□□□□ -0.2
COMMD3-205ENST00000463688 RECQLP46063 649 aaPredicted RBP13.83□□□□□ -0.2
COMMD3-205ENST00000463688 AFF3P51826 1226 aaKnown RBP13.83□□□□□ -0.2
COMMD3-205ENST00000463688 COPAP53621 1224 aa13.83□□□□□ -0.2
COMMD3-205ENST00000463688 CENPCQ03188 943 aa13.83□□□□□ -0.2
COMMD3-205ENST00000463688 SUZ12Q15022 739 aaKnown RBP13.83□□□□□ -0.2
COMMD3-205ENST00000463688 PTPRNQ16849 979 aa13.83□□□□□ -0.2
COMMD3-205ENST00000463688 SLC45A4Q5BKX6 768 aa13.83□□□□□ -0.2
COMMD3-205ENST00000463688 PPM1JQ5JR12 505 aa13.83□□□□□ -0.2
COMMD3-205ENST00000463688 ARMCX6Q7L4S7 300 aa13.83□□□□□ -0.2
COMMD3-205ENST00000463688 PHF13Q86YI8 300 aaPredicted RBP13.83□□□□□ -0.2
COMMD3-205ENST00000463688 TRIM11Q96F44 468 aa13.83□□□□□ -0.2
COMMD3-205ENST00000463688 EIF3CQ99613 913 aaKnown RBP13.83□□□□□ -0.2
COMMD3-205ENST00000463688 FEM1AQ9BSK4 669 aa13.83□□□□□ -0.2
COMMD3-205ENST00000463688 SIK2Q9H0K1 926 aa13.83□□□□□ -0.2
COMMD3-205ENST00000463688 SEPT11Q9NVA2 429 aaKnown RBP13.83□□□□□ -0.2
COMMD3-205ENST00000463688 VANGL2Q9ULK5 521 aa13.83□□□□□ -0.2
COMMD3-205ENST00000463688 HPCAL4Q9UM19 191 aa13.83□□□□□ -0.2
COMMD3-205ENST00000463688 HS3ST4Q9Y661 456 aa13.83□□□□□ -0.2
COMMD3-205ENST00000463688 BZW2Q9Y6E2 419 aaKnown RBP13.83□□□□□ -0.2
COMMD3-205ENST00000463688 DCDC2BA2VCK2 349 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 C4orf47A7E2U8 309 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 GOLGA8SH3BPF8 625 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 BCAT2O15382 392 aaPredicted RBP13.82□□□□□ -0.2
COMMD3-205ENST00000463688 ENDOD1O94919 500 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 SEMA4FO95754 770 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 CER1O95813 267 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 RHOCP08134 193 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 PNMA6AP0CW24 399 aaPredicted RBP13.82□□□□□ -0.2
COMMD3-205ENST00000463688 ENGP17813 658 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 TNFAIP3P21580 790 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 OR1E1P30953 314 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 HTR7P34969 479 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 PTPN9P43378 593 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 RPS14P62263 151 aaKnown RBP13.82□□□□□ -0.2
COMMD3-205ENST00000463688 IRX4P78413 519 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 NRG1Q02297 640 aaPredicted RBP13.82□□□□□ -0.2
COMMD3-205ENST00000463688 CST6Q15828 149 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 ZSCAN30Q86W11 494 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 C3orf20Q8ND61 904 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 AGPAT1Q99943 283 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 ZYG11BQ9C0D3 744 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 OSBPL2Q9H1P3 480 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 PABPC3Q9H361 631 aaKnown RBP13.82□□□□□ -0.2
COMMD3-205ENST00000463688 PIGVQ9NUD9 493 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 FBXL12Q9NXK8 326 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 TMEM59LQ9UK28 342 aa13.82□□□□□ -0.2
COMMD3-205ENST00000463688 AJAP1Q9UKB5 411 aaPredicted RBP13.82□□□□□ -0.2
COMMD3-205ENST00000463688 ILVBLA1L0T0 632 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 ZSCAN5CA6NGD5 496 aaPredicted RBP13.81□□□□□ -0.2
COMMD3-205ENST00000463688 SIGLEC16A6NMB1 481 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 DRGXA6NNA5 263 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 GDF9O60383 454 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 MAGEC1O60732 1142 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 UNGP13051 313 aaPredicted RBP13.81□□□□□ -0.2
COMMD3-205ENST00000463688 GOT1P17174 413 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 SGSHP51688 502 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 FMO1Q01740 532 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 NCAPHQ15003 741 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 CCDC6Q16204 474 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 CLEC16AQ2KHT3 1053 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 INAVAQ3KP66 663 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 ACCSLQ4AC99 568 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 DNAJC24Q6P3W2 148 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 DCUN1D2Q6PH85 259 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 MMS22LQ6ZRQ5 1243 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 DCAF4L2Q8NA75 395 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 CAPN10Q9HC96 672 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 RTN4Q9NQC3 1192 aaKnown RBP13.81□□□□□ -0.2
COMMD3-205ENST00000463688 DYRK4Q9NR20 520 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 ADAMTS1Q9UHI8 967 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 KIAA1549LQ6ZVL6 1849 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 IGLV3-10A0A075B6K4 115 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 ATP9BO43861 1147 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 TRIM16O95361 564 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 ADRB1P08588 477 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 ZNF883P0CG24 379 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 HLA-EP13747 358 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 CD27P26842 260 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 MAPKAPK2P49137 400 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 ZNF135P52742 658 aaPredicted RBP13.81□□□□□ -0.2
COMMD3-205ENST00000463688 FSCBQ5H9T9 825 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 FIGNQ5HY92 759 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 C9orf64Q5T6V5 341 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 DCAF12L1Q5VU92 463 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 OR2T34Q8NGX1 318 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 P2RY11Q96G91 374 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 PPP1R16AQ96I34 528 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 TBCBQ99426 244 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 GTPBP2Q9BX10 602 aaKnown RBP13.81□□□□□ -0.2
COMMD3-205ENST00000463688 CEP44Q9C0F1 390 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 MIR1-1HGQ9H1L0 117 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 PARVAQ9NVD7 372 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 TMEM63CQ9P1W3 806 aa13.81□□□□□ -0.2
COMMD3-205ENST00000463688 XPO7Q9UIA9 1087 aaKnown RBP13.81□□□□□ -0.2
COMMD3-205ENST00000463688 HS3ST2Q9Y278 367 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms