RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 KCNE4Q8WWG9 221 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 IRGQQ8WZA9 623 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 PTPRN2Q92932 1015 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 HIC2Q96JB3 615 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 RPL10LQ96L21 214 aaKnown RBP14.97□□□□□ -0.01
SMC1A-204ENST00000463684 PRICKLE1Q96MT3 831 aaPredicted RBP14.97□□□□□ -0.01
SMC1A-204ENST00000463684 DEPDC7Q96QD5 511 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 DPH1Q9BZG8 443 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 ARHGAP20Q9P2F6 1191 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 CYTH4Q9UIA0 394 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 KIAA1257Q9ULG3 409 aa14.97□□□□□ -0.01
SMC1A-204ENST00000463684 PRAMEF26H0Y7S4 382 aa14.96□□□□□ -0.01
SMC1A-204ENST00000463684 KLK10O43240 276 aa14.96□□□□□ -0.01
SMC1A-204ENST00000463684 SLC7A4O43246 635 aa14.96□□□□□ -0.01
SMC1A-204ENST00000463684 USP12O75317 370 aa14.96□□□□□ -0.01
SMC1A-204ENST00000463684 LUC7L3O95232 432 aaKnown RBP14.96□□□□□ -0.01
SMC1A-204ENST00000463684 NUCB2P80303 420 aa14.96□□□□□ -0.01
SMC1A-204ENST00000463684 LY6DQ14210 128 aa14.96□□□□□ -0.01
SMC1A-204ENST00000463684 SETMARQ53H47 684 aaPredicted RBP14.96□□□□□ -0.01
SMC1A-204ENST00000463684 MS4A13Q5J8X5 152 aa14.96□□□□□ -0.01
SMC1A-204ENST00000463684 FOXD4L5Q5VV16 416 aaPredicted RBP14.96□□□□□ -0.01
SMC1A-204ENST00000463684 FAM46CQ5VWP2 391 aa14.96□□□□□ -0.01
SMC1A-204ENST00000463684 TMC6Q7Z403 805 aa14.96□□□□□ -0.01
SMC1A-204ENST00000463684 DSG4Q86SJ6 1040 aa14.96□□□□□ -0.01
SMC1A-204ENST00000463684 SLC25A45Q8N413 288 aa14.96□□□□□ -0.01
SMC1A-204ENST00000463684 FOXD4L4Q8WXT5 416 aaPredicted RBP14.96□□□□□ -0.01
SMC1A-204ENST00000463684 KLHDC7BQ96G42 594 aa14.96□□□□□ -0.01
SMC1A-204ENST00000463684 SPAG5Q96R06 1193 aa14.96□□□□□ -0.01
SMC1A-204ENST00000463684 ABCG4Q9H172 646 aa14.96□□□□□ -0.01
SMC1A-204ENST00000463684 MAPK8IP1Q9UQF2 711 aa14.96□□□□□ -0.01
SMC1A-204ENST00000463684 ATMQ13315 3056 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 MGAQ8IWI9 3026 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 PIK3R2O00459 728 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 ARHGAP6O43182 974 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 OPA1O60313 960 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 RTN2O75298 545 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 DXOO77932 396 aaKnown RBP14.95□□□□□ -0.02
SMC1A-204ENST00000463684 LTFP02788 710 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 ALPPL2P10696 532 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 DGKAP23743 735 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 DRD3P35462 400 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 LSSP48449 732 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 RGS7P49802 495 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 VAC14Q08AM6 782 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 DCAF6Q58WW2 860 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 CDCP2Q5VXM1 449 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 TRIM69Q86WT6 500 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 APCDD1Q8J025 514 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 OR4C6Q8NH72 309 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 MYEOVQ96EZ4 313 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 SERPINB11Q96P15 392 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 NUCKS1Q9H1E3 243 aaKnown RBP14.95□□□□□ -0.02
SMC1A-204ENST00000463684 POLR1BQ9H9Y6 1135 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 THSD1Q9NS62 852 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 USP25Q9UHP3 1055 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 TLR6Q9Y2C9 796 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 PTPRQQ9UMZ3 2332 aa14.95□□□□□ -0.02
SMC1A-204ENST00000463684 CYSRT1A8MQ03 144 aa14.94□□□□□ -0.02
SMC1A-204ENST00000463684 O00370 1275 aa14.94□□□□□ -0.02
SMC1A-204ENST00000463684 FFAR2O15552 330 aa14.94□□□□□ -0.02
SMC1A-204ENST00000463684 PLRG1O43660 514 aaKnown RBP14.94□□□□□ -0.02
SMC1A-204ENST00000463684 RNGTTO60942 597 aaKnown RBP14.94□□□□□ -0.02
SMC1A-204ENST00000463684 MOCS2O96007 188 aaPredicted RBP14.94□□□□□ -0.02
SMC1A-204ENST00000463684 CKMT1AP12532 417 aa14.94□□□□□ -0.02
SMC1A-204ENST00000463684 SULT2A1Q06520 285 aa14.94□□□□□ -0.02
SMC1A-204ENST00000463684 CUL2Q13617 745 aa14.94□□□□□ -0.02
SMC1A-204ENST00000463684 SLC12A1Q13621 1099 aa14.94□□□□□ -0.02
SMC1A-204ENST00000463684 LGI2Q8N0V4 545 aa14.94□□□□□ -0.02
SMC1A-204ENST00000463684 SLC35F5Q8WV83 523 aa14.94□□□□□ -0.02
SMC1A-204ENST00000463684 OR8D1Q8WZ84 308 aa14.94□□□□□ -0.02
SMC1A-204ENST00000463684 EEF2KMTQ96G04 330 aa14.94□□□□□ -0.02
SMC1A-204ENST00000463684 FCRL2Q96LA5 508 aaPredicted RBP14.94□□□□□ -0.02
SMC1A-204ENST00000463684 SEMA4CQ9C0C4 833 aa14.94□□□□□ -0.02
SMC1A-204ENST00000463684 EVA1BQ9NVM1 165 aa14.94□□□□□ -0.02
SMC1A-204ENST00000463684 KLHL11Q9NVR0 708 aa14.94□□□□□ -0.02
SMC1A-204ENST00000463684 CFAP45Q9UL16 551 aa14.94□□□□□ -0.02
SMC1A-204ENST00000463684 CSO75390 466 aaKnown RBP14.93□□□□□ -0.02
SMC1A-204ENST00000463684 FBXO21O94952 628 aa14.93□□□□□ -0.02
SMC1A-204ENST00000463684 RHOBTB3O94955 611 aa14.93□□□□□ -0.02
SMC1A-204ENST00000463684 GP1BAP07359 652 aa14.93□□□□□ -0.02
SMC1A-204ENST00000463684 THEGLP0DJG4 465 aa14.93□□□□□ -0.02
SMC1A-204ENST00000463684 EPB41P11171 864 aaKnown RBP14.93□□□□□ -0.02
SMC1A-204ENST00000463684 VAV1P15498 845 aa14.93□□□□□ -0.02
SMC1A-204ENST00000463684 ZNF18P17022 549 aa14.93□□□□□ -0.02
SMC1A-204ENST00000463684 STK19P49842 368 aaPredicted RBP14.93□□□□□ -0.02
SMC1A-204ENST00000463684 DUSP3P51452 185 aaPredicted RBP14.93□□□□□ -0.02
SMC1A-204ENST00000463684 MCCD1P59942 119 aaPredicted RBP14.93□□□□□ -0.02
SMC1A-204ENST00000463684 KCNMA1Q12791 1236 aa14.93□□□□□ -0.02
SMC1A-204ENST00000463684 POM121L1PQ3SYA9 428 aa14.93□□□□□ -0.02
SMC1A-204ENST00000463684 ACCSLQ4AC99 568 aa14.93□□□□□ -0.02
SMC1A-204ENST00000463684 ATL3Q6DD88 541 aa14.93□□□□□ -0.02
SMC1A-204ENST00000463684 PMF1Q6P1K2 205 aa14.93□□□□□ -0.02
SMC1A-204ENST00000463684 LCLAT1Q6UWP7 414 aa14.93□□□□□ -0.02
SMC1A-204ENST00000463684 GUF1Q8N442 669 aaKnown RBP14.93□□□□□ -0.02
SMC1A-204ENST00000463684 SNRNP27Q8WVK2 155 aaKnown RBP14.93□□□□□ -0.02
SMC1A-204ENST00000463684 TTC9Q92623 222 aa14.93□□□□□ -0.02
SMC1A-204ENST00000463684 FAM131CQ96AQ9 280 aa14.93□□□□□ -0.02
SMC1A-204ENST00000463684 MED8Q96G25 268 aa14.93□□□□□ -0.02
SMC1A-204ENST00000463684 OSBPL2Q9H1P3 480 aa14.93□□□□□ -0.02
SMC1A-204ENST00000463684 UCKL1Q9NWZ5 548 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms