RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 CACNA1BQ00975 2339 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 CEP295Q9C0D2 2601 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 A0A1B0GVM2 712 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 FAM221BA6H8Z2 402 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 TCAF2A6NFQ2 919 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 TTC34A8MYJ7 566 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 M0QYT0 321 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 PAGE1O75459 146 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 GRAP2O75791 330 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 TRIM16O95361 564 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 LSM8O95777 96 aaKnown RBP9.44□□□□□ -0.9
BRCA1-207ENST00000461798 F9P00740 461 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 PNMA6AP0CW24 399 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-207ENST00000461798 CD27P26842 260 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 NNMTP40261 264 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 AFF3P51826 1226 aaKnown RBP9.44□□□□□ -0.9
BRCA1-207ENST00000461798 CST6Q15828 149 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 BRMS1LQ5PSV4 323 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 OTUD1Q5VV17 481 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-207ENST00000461798 CDKAL1Q5VV42 579 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 CXorf57Q6NSI4 855 aaKnown RBP9.44□□□□□ -0.9
BRCA1-207ENST00000461798 ARCQ7LC44 396 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 BNIPLQ7Z465 357 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 FAM124AQ86V42 546 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 CACUL1Q86Y37 369 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 DHX40Q8IX18 779 aaKnown RBP9.44□□□□□ -0.9
BRCA1-207ENST00000461798 RNF34Q969K3 372 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 IGSF8Q969P0 613 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 FAM131CQ96AQ9 280 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 BIRC7Q96CA5 298 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 C18orf8Q96DM3 657 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 C1orf74Q96LT6 269 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 FEM1AQ9BSK4 669 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 MIR1-1HGQ9H1L0 117 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 SYNCQ9H7C4 482 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 FBXL12Q9NXK8 326 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 ARHGEF38Q9NXL2 777 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.44□□□□□ -0.9
BRCA1-207ENST00000461798 FZD4Q9ULV1 537 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 TPX2Q9ULW0 747 aaKnown RBP9.44□□□□□ -0.9
BRCA1-207ENST00000461798 DAAM1Q9Y4D1 1078 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 PCDHGB2Q9Y5G2 931 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 OR51B4Q9Y5P0 310 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 FHOD1Q9Y613 1164 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 HS3ST4Q9Y661 456 aa9.44□□□□□ -0.9
BRCA1-207ENST00000461798 MUC22E2RYF6 1773 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-207ENST00000461798 LAMA1P25391 3075 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-207ENST00000461798 SPAARA0A1B0GVQ0 90 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 DRGXA6NNA5 263 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 F8VZ95 297 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 ATP9BO43861 1147 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 SH3BP5O60239 455 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 CBFA2T3O75081 653 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 CLDN11O75508 207 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 ENDOD1O94919 500 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 IGHV4-34P06331 123 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 PROS1P07225 676 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 GOT1P17174 413 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 C5AR1P21730 350 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 MZF1P28698 734 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-207ENST00000461798 SLC8A1P32418 973 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 GRIA4P48058 902 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 CCR5P51681 352 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 GALCP54803 685 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 CDH4P55283 916 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 FAM193AP78312 1265 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 SIM1P81133 766 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-207ENST00000461798 FOXC1Q12948 553 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 NME3Q13232 169 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 ZNF177Q13360 481 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-207ENST00000461798 RAPGEF1Q13905 1077 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 ST3GAL2Q16842 350 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 HLA-BQ31612 363 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 SLC25A52Q3SY17 297 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 HSP90AA4PQ58FG1 418 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 ARTNQ5T4W7 220 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 RNF219Q5W0B1 726 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-207ENST00000461798 KIAA0895LQ68EN5 471 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 C14orf80Q86SX3 495 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 GLRX5Q86SX6 157 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 ERICH1Q86X53 443 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 ZNF677Q86XU0 584 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 XYLT1Q86Y38 959 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 ZNF683Q8IZ20 524 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 FRS2Q8WU20 508 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 RPRD1AQ96P16 312 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-207ENST00000461798 ADAM33Q9BZ11 813 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 NEUROG2Q9H2A3 272 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 PDCL3Q9H2J4 239 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 WDCPQ9H6R7 721 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 TM9SF3Q9HD45 589 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 PIGVQ9NUD9 493 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 TMEM59LQ9UK28 342 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 STAP1Q9ULZ2 295 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 NEUROG3Q9Y4Z2 214 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 PAXBP1Q9Y5B6 917 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 SLCO1B1Q9Y6L6 691 aa9.43□□□□□ -0.9
BRCA1-207ENST00000461798 MAP1BP46821 2468 aaKnown RBP9.43□□□□□ -0.9
BRCA1-207ENST00000461798 CEP192Q8TEP8 1941 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms