RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 FRMD1Q8N878 549 aa13.66□□□□□ -0.22
RAB11FIP3-207ENST00000461009 CENPIQ92674 756 aaPredicted RBP13.66□□□□□ -0.22
RAB11FIP3-207ENST00000461009 PRCCQ92733 491 aaPredicted RBP13.66□□□□□ -0.22
RAB11FIP3-207ENST00000461009 ZNF653Q96CK0 615 aa13.66□□□□□ -0.22
RAB11FIP3-207ENST00000461009 MRGPRX1Q96LB2 322 aa13.66□□□□□ -0.22
RAB11FIP3-207ENST00000461009 CCDC42Q96M95 316 aa13.66□□□□□ -0.22
RAB11FIP3-207ENST00000461009 MCEEQ96PE7 176 aa13.66□□□□□ -0.22
RAB11FIP3-207ENST00000461009 HAPLN3Q96S86 360 aa13.66□□□□□ -0.22
RAB11FIP3-207ENST00000461009 NCAPGQ9BPX3 1015 aa13.66□□□□□ -0.22
RAB11FIP3-207ENST00000461009 CNPY3Q9BT09 278 aa13.66□□□□□ -0.22
RAB11FIP3-207ENST00000461009 PILRBQ9UKJ0 227 aa13.66□□□□□ -0.22
RAB11FIP3-207ENST00000461009 ABCA7Q8IZY2 2146 aa13.66□□□□□ -0.22
RAB11FIP3-207ENST00000461009 A0A087X0T9 212 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 IGHV1OR15-9A0A0B4J2B8 117 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 WASH3PC4AMC7 463 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 CFIP05156 583 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 EPHX1P07099 455 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 FAM228BP0C875 321 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 CD6P30203 668 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 IL12RB1P42701 662 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 OXCT1P55809 520 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 IRX4P78413 519 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 ZNF234Q14588 700 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 SLC18A3Q16572 532 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 C15orf59Q2T9L4 293 aaPredicted RBP13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 FNDC3BQ53EP0 1204 aaKnown RBP13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 WDR45BQ5MNZ6 344 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 PPP1R15BQ5SWA1 713 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 OTUD1Q5VV17 481 aaPredicted RBP13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 SLC23A3Q6PIS1 610 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 METTL3Q86U44 580 aaKnown RBP13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 TMPRSS6Q8IU80 811 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 MFN1Q8IWA4 741 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 RGL4Q8IZJ4 473 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 DEFB119Q8N690 84 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 FIBINQ8TAL6 211 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 FAM172AQ8WUF8 416 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 ERLEC1Q96DZ1 483 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 SIPA1Q96FS4 1042 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 PPP1R9BQ96SB3 815 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 PRMT1Q99873 361 aaKnown RBP13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 MYO1AQ9UBC5 1043 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 SUSD2Q9UGT4 822 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 XPO7Q9UIA9 1087 aaKnown RBP13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 SLC6A14Q9UN76 642 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 HS3ST4Q9Y661 456 aa13.65□□□□□ -0.22
RAB11FIP3-207ENST00000461009 NUP205Q92621 2012 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 H0Y626 953 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 TM4SF5O14894 197 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 RNF8O76064 485 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 MOCS3O95396 460 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 SYPP08247 313 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 POLR2EP19388 210 aaKnown RBP13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 ITPKAP23677 461 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 PSMA2P25787 234 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 ADRA1BP35368 520 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 RPL7AP62424 266 aaKnown RBP13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 RPS24P62847 133 aaKnown RBP13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 CDH18Q13634 790 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 ENPP2Q13822 863 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 AUHQ13825 339 aaKnown RBP13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 UAP1L1Q3KQV9 507 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 FUT11Q495W5 492 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 FBXL22Q6P050 247 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 SCYL2Q6P3W7 929 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 CHST9Q7L1S5 443 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 FAM131BQ86XD5 332 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 CFAP52Q8N1V2 620 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 CARNMT1Q8N4J0 409 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 HDDC3Q8N4P3 179 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 FNIP1Q8TF40 1166 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 RPRD1AQ96P16 312 aaPredicted RBP13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 ADAM33Q9BZ11 813 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 SLC32A1Q9H598 525 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 NHEJ1Q9H9Q4 299 aaPredicted RBP13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 FBRSQ9HAH7 460 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 ITM2CQ9NQX7 267 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 ABCB8Q9NUT2 735 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 KIAA1522Q9P206 1035 aaPredicted RBP13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 SUN2Q9UH99 717 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 GGA2Q9UJY4 613 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 VANGL2Q9ULK5 521 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 CACNA1AO00555 2505 aa13.64□□□□□ -0.23
RAB11FIP3-207ENST00000461009 A0A1B0GVM2 712 aa13.63□□□□□ -0.23
RAB11FIP3-207ENST00000461009 TCAF2A6NFQ2 919 aa13.63□□□□□ -0.23
RAB11FIP3-207ENST00000461009 TMEM191CA6NGB0 347 aa13.63□□□□□ -0.23
RAB11FIP3-207ENST00000461009 MEI4A8MW99 385 aa13.63□□□□□ -0.23
RAB11FIP3-207ENST00000461009 GOLGA6L6A8MZA4 724 aa13.63□□□□□ -0.23
RAB11FIP3-207ENST00000461009 PATE3B3GLJ2 98 aa13.63□□□□□ -0.23
RAB11FIP3-207ENST00000461009 CLDN11O75508 207 aa13.63□□□□□ -0.23
RAB11FIP3-207ENST00000461009 LUC7L3O95232 432 aaKnown RBP13.63□□□□□ -0.23
RAB11FIP3-207ENST00000461009 KCNK5O95279 499 aa13.63□□□□□ -0.23
RAB11FIP3-207ENST00000461009 SERPINF2P08697 491 aa13.63□□□□□ -0.23
RAB11FIP3-207ENST00000461009 PABPC1P11940 636 aaKnown RBP13.63□□□□□ -0.23
RAB11FIP3-207ENST00000461009 ENGP17813 658 aa13.63□□□□□ -0.23
RAB11FIP3-207ENST00000461009 HLA-FP30511 346 aa13.63□□□□□ -0.23
RAB11FIP3-207ENST00000461009 NOVA1P51513 510 aaKnown RBP13.63□□□□□ -0.23
RAB11FIP3-207ENST00000461009 SGSHP51688 502 aa13.63□□□□□ -0.23
RAB11FIP3-207ENST00000461009 GALCP54803 685 aa13.63□□□□□ -0.23
RAB11FIP3-207ENST00000461009 AIF1P55008 147 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms