RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 MPP4Q96JB8 637 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 CCDC138Q96M89 665 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 NLRP4Q96MN2 994 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 GLT1D1Q96MS3 346 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 SERINC2Q96SA4 455 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 DIRC2Q96SL1 478 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 KATNAL1Q9BW62 490 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 DHX33Q9H6R0 707 aaKnown RBP5.3□□□□□ -1.56
SF3A3-202ENST00000460925 WDCPQ9H6R7 721 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 PTPRHQ9HD43 1115 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 ANKEF1Q9NU02 776 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 SPATA6Q9NWH7 488 aaPredicted RBP5.3□□□□□ -1.56
SF3A3-202ENST00000460925 MAN1B1Q9UKM7 699 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 DMTF1Q9Y222 760 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 GINS2Q9Y248 185 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 ATP11BQ9Y2G3 1177 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 PMF1-BGLAPU3KQ54 211 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 CITO14578 2027 aa5.3□□□□□ -1.56
SF3A3-202ENST00000460925 LRRC14BA6NHZ5 514 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 GOLGA6L6A8MZA4 724 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 ISM1B1AKI9 464 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 K7ENM7 598 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 MYO1FO00160 1098 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 SLC16A4O15374 487 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 DKC1O60832 514 aaKnown RBP eCLIP5.29□□□□□ -1.56
SF3A3-202ENST00000460925 TBCAO75347 108 aaKnown RBP5.29□□□□□ -1.56
SF3A3-202ENST00000460925 TCEA3O75764 348 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 AMY1AP04745 511 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 MALP21145 153 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 MUTP22033 750 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 GLRA2P23416 452 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 PSMA3P25788 255 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 PIK3CAP42336 1068 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 PIK3CBP42338 1070 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 KIR2DL3P43628 341 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 LIMS1P48059 325 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 SLC26A2P50443 739 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 ZNF131P52739 623 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 PEX3P56589 373 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 PTGISQ16647 500 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 TMEM95Q3KNT9 176 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 TBC1D25Q3MII6 688 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 DPCR1Q3MIW9 517 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 ZSCAN23Q3MJ62 389 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 KHDC1Q4VXA5 237 aaKnown RBP5.29□□□□□ -1.56
SF3A3-202ENST00000460925 ZC2HC1CQ53FD0 456 aaPredicted RBP5.29□□□□□ -1.56
SF3A3-202ENST00000460925 CCDC157Q569K6 752 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 DGKKQ5KSL6 1271 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 C16orf54Q6UWD8 224 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 SLC39A5Q6ZMH5 540 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 LARP4Q71RC2 724 aaKnown RBP eCLIP5.29□□□□□ -1.56
SF3A3-202ENST00000460925 LCA5Q86VQ0 697 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 CDR2LQ86X02 465 aaPredicted RBP5.29□□□□□ -1.56
SF3A3-202ENST00000460925 RHPN2Q8IUC4 686 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 NELFCDQ8IXH7 590 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 MYCT1Q8N699 235 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 NUDT10Q8NFP7 164 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 FNIP1Q8TF40 1166 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 SMARCE1Q969G3 411 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 NUDT11Q96G61 164 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 FIZ1Q96SL8 496 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 NELL2Q99435 816 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 SGPP1Q9BX95 441 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 SLC7A5P2Q9GIP4 190 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 NACA2Q9H009 215 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 CUEDC2Q9H467 287 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 C11orf49Q9H6J7 331 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 MINDY3Q9H8M7 445 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 ZMAT3Q9HA38 289 aaKnown RBP5.29□□□□□ -1.56
SF3A3-202ENST00000460925 TLR9Q9NR96 1032 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 LANCL2Q9NS86 450 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 NRBP2Q9NSY0 501 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 EXOC1Q9NV70 894 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 PANK4Q9NVE7 773 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 PNPOQ9NVS9 261 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 FNIP2Q9P278 1114 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 SUCLA2Q9P2R7 463 aaPredicted RBP5.29□□□□□ -1.56
SF3A3-202ENST00000460925 XPO7Q9UIA9 1087 aaKnown RBP5.29□□□□□ -1.56
SF3A3-202ENST00000460925 TMEM98Q9Y2Y6 226 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.29□□□□□ -1.56
SF3A3-202ENST00000460925 COL1A2P08123 1366 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 ZMYM2Q9UBW7 1377 aa5.29□□□□□ -1.56
SF3A3-202ENST00000460925 TNRC18O15417 2968 aaPredicted RBP5.28□□□□□ -1.56
SF3A3-202ENST00000460925 PDCD11Q14690 1871 aaKnown RBP5.28□□□□□ -1.56
SF3A3-202ENST00000460925 RALGAPA2Q2PPJ7 1873 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 NRCAMQ92823 1304 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 A0A087WZ62 844 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 IGKV6-21A0A0C4DH24 114 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 SCO2A0A1W2PP80 73 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 FRMD3A2A2Y4 597 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 MBLAC1A4D2B0 266 aaPredicted RBP5.28□□□□□ -1.56
SF3A3-202ENST00000460925 C2orf78A6NCI8 922 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 TRIM49BA6NDI0 452 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 RRN3P2A6NIE6 340 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 CCDC169A6NNP5 214 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 NT5C1B-RDH14C9J2C7 533 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 B4GALT5O43286 388 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 SLC26A4O43511 780 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 GCNT3O95395 438 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 IQCF3P0C7M6 154 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms