RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 RNF40O75150 1001 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 TCF4P15884 667 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 EPHB2P29323 1055 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 OR1E1P30953 314 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 CD70P32970 193 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 MAPKAPK2P49137 400 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 IRAK1P51617 712 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 PLK1P53350 603 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 NRLP54845 237 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 TPI1P60174 286 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 LMAN2Q12907 356 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 CA9Q16790 459 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 GEN1Q17RS7 908 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 FSCBQ5H9T9 825 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 KCNT1Q5JUK3 1230 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 LRRC38Q5VT99 294 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 ZNF783Q6ZMS7 281 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 MAMSTRQ6ZN01 415 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 TRMT11Q7Z4G4 463 aaKnown RBP23.09■■□□□ 1.29
C9orf3-209ENST00000460573 MAML2Q8IZL2 1156 aaPredicted RBP23.09■■□□□ 1.29
C9orf3-209ENST00000460573 TPCN2Q8NHX9 752 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 HSPH1Q92598 858 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 KCTD15Q96SI1 283 aaPredicted RBP23.09■■□□□ 1.29
C9orf3-209ENST00000460573 TMEM248Q9NWD8 314 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 ELOVL2Q9NXB9 296 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 ALG6Q9Y672 507 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 DUSP10Q9Y6W6 482 aa23.09■■□□□ 1.29
C9orf3-209ENST00000460573 WASH4PA8MWX3 477 aa23.08■■□□□ 1.29
C9orf3-209ENST00000460573 CHURC1-FNTBB4DL54 471 aa23.08■■□□□ 1.29
C9orf3-209ENST00000460573 PRRT4C9JH25 899 aa23.08■■□□□ 1.29
C9orf3-209ENST00000460573 EEF2KO00418 725 aaKnown RBP23.08■■□□□ 1.29
C9orf3-209ENST00000460573 SPOPO43791 374 aa23.08■■□□□ 1.29
C9orf3-209ENST00000460573 ATP5BP06576 529 aaKnown RBP23.08■■□□□ 1.29
C9orf3-209ENST00000460573 ARL4AP40617 200 aa23.08■■□□□ 1.29
C9orf3-209ENST00000460573 KIR2DL1P43626 348 aaPredicted RBP23.08■■□□□ 1.29
C9orf3-209ENST00000460573 SMTNL2Q2TAL5 461 aa23.08■■□□□ 1.29
C9orf3-209ENST00000460573 CXorf57Q6NSI4 855 aaKnown RBP23.08■■□□□ 1.29
C9orf3-209ENST00000460573 ZNF662Q6ZS27 426 aa23.08■■□□□ 1.29
C9orf3-209ENST00000460573 NLRP14Q86W24 1093 aa23.08■■□□□ 1.29
C9orf3-209ENST00000460573 MAP7D3Q8IWC1 876 aa23.08■■□□□ 1.29
C9orf3-209ENST00000460573 RNF10Q8N5U6 811 aaKnown RBP23.08■■□□□ 1.29
C9orf3-209ENST00000460573 USP33Q8TEY7 942 aa23.08■■□□□ 1.29
C9orf3-209ENST00000460573 FAM126AQ9BYI3 521 aaPredicted RBP23.08■■□□□ 1.29
C9orf3-209ENST00000460573 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.08■■□□□ 1.29
C9orf3-209ENST00000460573 ZNF212Q9UDV6 495 aa23.08■■□□□ 1.29
C9orf3-209ENST00000460573 SALL4Q9UJQ4 1053 aa23.08■■□□□ 1.29
C9orf3-209ENST00000460573 RAB23Q9ULC3 237 aa23.08■■□□□ 1.29
C9orf3-209ENST00000460573 NEU3Q9UQ49 428 aa23.08■■□□□ 1.29
C9orf3-209ENST00000460573 RIF1Q5UIP0 2472 aaKnown RBP23.08■■□□□ 1.29
C9orf3-209ENST00000460573 USP34Q70CQ2 3546 aa23.07■■□□□ 1.28
C9orf3-209ENST00000460573 ILVBLA1L0T0 632 aa23.07■■□□□ 1.28
C9orf3-209ENST00000460573 DAPK3O43293 454 aa23.07■■□□□ 1.28
C9orf3-209ENST00000460573 BUB1O43683 1085 aa23.07■■□□□ 1.28
C9orf3-209ENST00000460573 HNRNPLP14866 589 aaKnown RBP eCLIP23.07■■□□□ 1.281e-10■■■□□ 17.7
C9orf3-209ENST00000460573 POLR2EP19388 210 aaKnown RBP23.07■■□□□ 1.28
C9orf3-209ENST00000460573 COMTP21964 271 aa23.07■■□□□ 1.28
C9orf3-209ENST00000460573 TAS2R40P59535 323 aa23.07■■□□□ 1.28
C9orf3-209ENST00000460573 SULT2A1Q06520 285 aa23.07■■□□□ 1.28
C9orf3-209ENST00000460573 PDK2Q15119 407 aa23.07■■□□□ 1.28
C9orf3-209ENST00000460573 PLEKHG6Q3KR16 790 aa23.07■■□□□ 1.28
C9orf3-209ENST00000460573 PPP6R3Q5H9R7 873 aaPredicted RBP23.07■■□□□ 1.28
C9orf3-209ENST00000460573 MBLAC2Q68D91 279 aa23.07■■□□□ 1.28
C9orf3-209ENST00000460573 TXNRD3NBQ6F5E7 133 aa23.07■■□□□ 1.28
C9orf3-209ENST00000460573 TFAP2DQ7Z6R9 452 aa23.07■■□□□ 1.28
C9orf3-209ENST00000460573 DAAM2Q86T65 1068 aa23.07■■□□□ 1.28
C9orf3-209ENST00000460573 ADIPOR2Q86V24 386 aa23.07■■□□□ 1.28
C9orf3-209ENST00000460573 RHOT1Q8IXI2 618 aa23.07■■□□□ 1.28
C9orf3-209ENST00000460573 SPEM1Q8N4L4 309 aa23.07■■□□□ 1.28
C9orf3-209ENST00000460573 ZNF513Q8N8E2 541 aaPredicted RBP23.07■■□□□ 1.28
C9orf3-209ENST00000460573 FAM71BQ8TC56 605 aa23.07■■□□□ 1.28
C9orf3-209ENST00000460573 RUBCNQ92622 972 aa23.07■■□□□ 1.28
C9orf3-209ENST00000460573 TTC17Q96AE7 1141 aa23.07■■□□□ 1.28
C9orf3-209ENST00000460573 ACDQ96AP0 544 aa23.07■■□□□ 1.28
C9orf3-209ENST00000460573 PRMT8Q9NR22 394 aaPredicted RBP23.07■■□□□ 1.28
C9orf3-209ENST00000460573 RCOR3Q9P2K3 495 aaPredicted RBP23.07■■□□□ 1.28
C9orf3-209ENST00000460573 H3BRJ5 948 aa23.06■■□□□ 1.28
C9orf3-209ENST00000460573 ASLP04424 464 aa23.06■■□□□ 1.28
C9orf3-209ENST00000460573 RHOCP08134 193 aa23.06■■□□□ 1.28
C9orf3-209ENST00000460573 ETFBP38117 255 aa23.06■■□□□ 1.28
C9orf3-209ENST00000460573 CXCL12P48061 93 aa23.06■■□□□ 1.28
C9orf3-209ENST00000460573 SEC13P55735 322 aa23.06■■□□□ 1.28
C9orf3-209ENST00000460573 KRT81Q14533 505 aa23.06■■□□□ 1.28
C9orf3-209ENST00000460573 PITRM1Q5JRX3 1037 aa23.06■■□□□ 1.28
C9orf3-209ENST00000460573 TMEM215Q68D42 235 aa23.06■■□□□ 1.28
C9orf3-209ENST00000460573 RFX8Q6ZV50 586 aa23.06■■□□□ 1.28
C9orf3-209ENST00000460573 SFTPA1Q8IWL2 248 aa23.06■■□□□ 1.28
C9orf3-209ENST00000460573 RTL3Q8N8U3 475 aaKnown RBP23.06■■□□□ 1.28
C9orf3-209ENST00000460573 CIPCQ9C0C6 399 aa23.06■■□□□ 1.28
C9orf3-209ENST00000460573 PLA2G4CQ9UP65 541 aa23.06■■□□□ 1.28
C9orf3-209ENST00000460573 DOCK4Q8N1I0 1966 aa23.05■■□□□ 1.28
C9orf3-209ENST00000460573 TIE1P35590 1138 aa23.05■■□□□ 1.28
C9orf3-209ENST00000460573 CSKP41240 450 aa23.05■■□□□ 1.28
C9orf3-209ENST00000460573 CDH6P55285 790 aa23.05■■□□□ 1.28
C9orf3-209ENST00000460573 FUT11Q495W5 492 aa23.05■■□□□ 1.28
C9orf3-209ENST00000460573 C2orf27AQ580R0 203 aa23.05■■□□□ 1.28
C9orf3-209ENST00000460573 RNF219Q5W0B1 726 aaPredicted RBP23.05■■□□□ 1.28
C9orf3-209ENST00000460573 Q6ZS52 159 aa23.05■■□□□ 1.28
C9orf3-209ENST00000460573 CPNE8Q86YQ8 564 aa23.05■■□□□ 1.28
C9orf3-209ENST00000460573 KIAA2013Q8IYS2 634 aa23.05■■□□□ 1.28
C9orf3-209ENST00000460573 SYCE1Q8N0S2 351 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms