RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 HSPA12BQ96MM6 686 aa23.67■■□□□ 1.38
PTPN4-208ENST00000460289 FEM1AQ9BSK4 669 aa23.67■■□□□ 1.38
PTPN4-208ENST00000460289 SELENOOQ9BVL4 669 aa23.67■■□□□ 1.38
PTPN4-208ENST00000460289 NUSAP1Q9BXS6 441 aaKnown RBP23.67■■□□□ 1.38
PTPN4-208ENST00000460289 EDEM3Q9BZQ6 932 aa23.67■■□□□ 1.38
PTPN4-208ENST00000460289 NUP205Q92621 2012 aa23.67■■□□□ 1.38
PTPN4-208ENST00000460289 ITIH6Q6UXX5 1313 aa23.66■■□□□ 1.38
PTPN4-208ENST00000460289 EDDM13A0A1B0GTR0 161 aa23.66■■□□□ 1.38
PTPN4-208ENST00000460289 C2CD4BA6NLJ0 364 aa23.66■■□□□ 1.38
PTPN4-208ENST00000460289 PATE3B3GLJ2 98 aa23.66■■□□□ 1.38
PTPN4-208ENST00000460289 I6L893 689 aaPredicted RBP23.66■■□□□ 1.38
PTPN4-208ENST00000460289 RNASEH1O60930 286 aaKnown RBP23.66■■□□□ 1.38
PTPN4-208ENST00000460289 TNFAIP3P21580 790 aa23.66■■□□□ 1.38
PTPN4-208ENST00000460289 PTPN9P43378 593 aa23.66■■□□□ 1.38
PTPN4-208ENST00000460289 RPS14P62263 151 aaKnown RBP23.66■■□□□ 1.38
PTPN4-208ENST00000460289 SFSWAPQ12872 951 aaKnown RBP23.66■■□□□ 1.38
PTPN4-208ENST00000460289 DUOXA1Q1HG43 343 aa23.66■■□□□ 1.38
PTPN4-208ENST00000460289 ARL13BQ3SXY8 428 aa23.66■■□□□ 1.38
PTPN4-208ENST00000460289 CCDC14Q49A88 953 aa23.66■■□□□ 1.38
PTPN4-208ENST00000460289 ZNF776Q68DI1 518 aaPredicted RBP23.66■■□□□ 1.38
PTPN4-208ENST00000460289 SLC23A3Q6PIS1 610 aa23.66■■□□□ 1.38
PTPN4-208ENST00000460289 LUZP1Q86V48 1076 aa23.66■■□□□ 1.38
PTPN4-208ENST00000460289 FAM131BQ86XD5 332 aa23.66■■□□□ 1.38
PTPN4-208ENST00000460289 CACUL1Q86Y37 369 aa23.66■■□□□ 1.38
PTPN4-208ENST00000460289 SLC41A1Q8IVJ1 513 aa23.66■■□□□ 1.38
PTPN4-208ENST00000460289 C3orf20Q8ND61 904 aa23.66■■□□□ 1.38
PTPN4-208ENST00000460289 EDEM2Q9BV94 578 aa23.66■■□□□ 1.38
PTPN4-208ENST00000460289 GPR174Q9BXC1 333 aa23.66■■□□□ 1.38
PTPN4-208ENST00000460289 RSPH9Q9H1X1 276 aaPredicted RBP23.66■■□□□ 1.38
PTPN4-208ENST00000460289 SLCO3A1Q9UIG8 710 aa23.66■■□□□ 1.38
PTPN4-208ENST00000460289 SCML1Q9UN30 329 aa23.66■■□□□ 1.38
PTPN4-208ENST00000460289 LNP1A1A4G5 178 aa23.65■■□□□ 1.38
PTPN4-208ENST00000460289 LRRC53A6NM62 1247 aa23.65■■□□□ 1.38
PTPN4-208ENST00000460289 SIGLEC16A6NMB1 481 aa23.65■■□□□ 1.38
PTPN4-208ENST00000460289 TTC34A8MYJ7 566 aa23.65■■□□□ 1.38
PTPN4-208ENST00000460289 GOLGA6L19H0YKK7 550 aa23.65■■□□□ 1.38
PTPN4-208ENST00000460289 IRAK1P51617 712 aa23.65■■□□□ 1.38
PTPN4-208ENST00000460289 IRX4P78413 519 aa23.65■■□□□ 1.38
PTPN4-208ENST00000460289 TTC31Q49AM3 519 aaPredicted RBP23.65■■□□□ 1.38
PTPN4-208ENST00000460289 ACAD10Q6JQN1 1059 aa23.65■■□□□ 1.38
PTPN4-208ENST00000460289 LRSAM1Q6UWE0 723 aa23.65■■□□□ 1.38
PTPN4-208ENST00000460289 MON1BQ7L1V2 547 aa23.65■■□□□ 1.38
PTPN4-208ENST00000460289 STRADAQ7RTN6 431 aa23.65■■□□□ 1.38
PTPN4-208ENST00000460289 SETD3Q86TU7 594 aaPredicted RBP23.65■■□□□ 1.38
PTPN4-208ENST00000460289 ZNF683Q8IZ20 524 aa23.65■■□□□ 1.38
PTPN4-208ENST00000460289 RGL4Q8IZJ4 473 aa23.65■■□□□ 1.38
PTPN4-208ENST00000460289 JOSD2Q8TAC2 188 aa23.65■■□□□ 1.38
PTPN4-208ENST00000460289 RPL10LQ96L21 214 aaKnown RBP23.65■■□□□ 1.38
PTPN4-208ENST00000460289 MTG2Q9H4K7 406 aa23.65■■□□□ 1.38
PTPN4-208ENST00000460289 VPS28Q9UK41 221 aa23.65■■□□□ 1.38
PTPN4-208ENST00000460289 MUC22E2RYF6 1773 aaPredicted RBP23.65■■□□□ 1.38
PTPN4-208ENST00000460289 IGLV3-10A0A075B6K4 115 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 DCDC2BA2VCK2 349 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 ANKRD62A6NC57 917 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 E9PAM4 449 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 SRGAP2O75044 1071 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 SIN3BO75182 1162 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 CNTN5O94779 1100 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 RFC1P35251 1148 aaPredicted RBP23.64■■□□□ 1.37
PTPN4-208ENST00000460289 VASPP50552 380 aaPredicted RBP23.64■■□□□ 1.37
PTPN4-208ENST00000460289 ASIC2Q16515 512 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 CDO1Q16878 200 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 C15orf59Q2T9L4 293 aaPredicted RBP23.64■■□□□ 1.37
PTPN4-208ENST00000460289 ZSCAN23Q3MJ62 389 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 ALFQ53S48 1182 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 C9orf64Q5T6V5 341 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 SFMBT2Q5VUG0 894 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 CENPIQ92674 756 aaPredicted RBP23.64■■□□□ 1.37
PTPN4-208ENST00000460289 ALG14Q96F25 216 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 MUC3BQ9H195 1237 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 PCED1AQ9H1Q7 454 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 TMPRSS4Q9NRS4 437 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 AIPL1Q9NZN9 384 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 SUSD2Q9UGT4 822 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 SLC25A13Q9UJS0 675 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 SLC6A14Q9UN76 642 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 NCKAP1Q9Y2A7 1128 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 SNX10Q9Y5X0 201 aa23.64■■□□□ 1.37
PTPN4-208ENST00000460289 ATXN2Q99700 1313 aaKnown RBP23.63■■□□□ 1.37
PTPN4-208ENST00000460289 GON4LQ3T8J9 2241 aa23.63■■□□□ 1.37
PTPN4-208ENST00000460289 GNSP15586 552 aa23.63■■□□□ 1.37
PTPN4-208ENST00000460289 ADRA1BP35368 520 aa23.63■■□□□ 1.37
PTPN4-208ENST00000460289 KRT83P78385 493 aa23.63■■□□□ 1.37
PTPN4-208ENST00000460289 FANCCQ00597 558 aa23.63■■□□□ 1.37
PTPN4-208ENST00000460289 FIGNQ5HY92 759 aa23.63■■□□□ 1.37
PTPN4-208ENST00000460289 C6orf118Q5T5N4 469 aa23.63■■□□□ 1.37
PTPN4-208ENST00000460289 DNAJC24Q6P3W2 148 aa23.63■■□□□ 1.37
PTPN4-208ENST00000460289 WDR59Q6PJI9 974 aa23.63■■□□□ 1.37
PTPN4-208ENST00000460289 FAM124AQ86V42 546 aa23.63■■□□□ 1.37
PTPN4-208ENST00000460289 VCPIP1Q96JH7 1222 aa23.63■■□□□ 1.37
PTPN4-208ENST00000460289 BTBD1Q9H0C5 482 aa23.63■■□□□ 1.37
PTPN4-208ENST00000460289 OR51B4Q9Y5P0 310 aa23.63■■□□□ 1.37
PTPN4-208ENST00000460289 METTL12A8MUP2 240 aa23.62■■□□□ 1.37
PTPN4-208ENST00000460289 MEI4A8MW99 385 aa23.62■■□□□ 1.37
PTPN4-208ENST00000460289 GJB6O95452 261 aa23.62■■□□□ 1.37
PTPN4-208ENST00000460289 CFIP05156 583 aa23.62■■□□□ 1.37
PTPN4-208ENST00000460289 RHOCP08134 193 aa23.62■■□□□ 1.37
PTPN4-208ENST00000460289 SERPINF2P08697 491 aa23.62■■□□□ 1.37
PTPN4-208ENST00000460289 GPD1P21695 349 aa23.62■■□□□ 1.37
PTPN4-208ENST00000460289 STK19P49842 368 aaPredicted RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms