RNA–Protein interactions for RNA: ENST00000460227.4

MECP2-206, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-206ENST00000460227 FEM1AQ9BSK4 669 aa13.2□□□□□ -0.3
MECP2-206ENST00000460227 C1QTNF1Q9BXJ1 281 aa13.2□□□□□ -0.3
MECP2-206ENST00000460227 GOLPH3Q9H4A6 298 aa13.2□□□□□ -0.3
MECP2-206ENST00000460227 CATSPERBQ9H7T0 1116 aa13.2□□□□□ -0.3
MECP2-206ENST00000460227 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.2□□□□□ -0.3
MECP2-206ENST00000460227 NDFIP2Q9NV92 336 aa13.2□□□□□ -0.3
MECP2-206ENST00000460227 GGA2Q9UJY4 613 aa13.2□□□□□ -0.3
MECP2-206ENST00000460227 KIF26AQ9ULI4 1882 aaPredicted RBP13.2□□□□□ -0.3
MECP2-206ENST00000460227 TECTAO75443 2155 aa13.2□□□□□ -0.3
MECP2-206ENST00000460227 FAM86C2PA6NEL3 165 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 PRR33A8MZF0 331 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 EEF2KO00418 725 aaKnown RBP13.19□□□□□ -0.3
MECP2-206ENST00000460227 SPOPO43791 374 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 PALMO75781 387 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 CD48P09326 243 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 HNRNPLP14866 589 aaKnown RBP eCLIP13.19□□□□□ -0.34e-6■□□□□ 8.2
MECP2-206ENST00000460227 GOT1P17174 413 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 ERCC2P18074 760 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 KDELR1P24390 212 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 AVPR2P30518 371 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 MAPKAPK2P49137 400 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 CDH6P55285 790 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 TPI1P60174 286 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 MRPS21P82921 87 aaKnown RBP13.19□□□□□ -0.3
MECP2-206ENST00000460227 DPYSQ14117 519 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 PLEKHG6Q3KR16 790 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 PPP6R3Q5H9R7 873 aaPredicted RBP13.19□□□□□ -0.3
MECP2-206ENST00000460227 C6orf118Q5T5N4 469 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 RNF219Q5W0B1 726 aaPredicted RBP13.19□□□□□ -0.3
MECP2-206ENST00000460227 ZNF783Q6ZMS7 281 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 RFX8Q6ZV50 586 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 ANKS1BQ7Z6G8 1248 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 TFAP2DQ7Z6R9 452 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 NT5DC3Q86UY8 548 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 MAP7D3Q8IWC1 876 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 REXO1L1PQ8IX06 675 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 APCDD1Q8J025 514 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 AHI1Q8N157 1196 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 RTL3Q8N8U3 475 aaKnown RBP13.19□□□□□ -0.3
MECP2-206ENST00000460227 USP33Q8TEY7 942 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 UBE2Q2Q8WVN8 375 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 CSPG4P5Q96PW8 444 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 KLC2Q9H0B6 622 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 DONSONQ9NYP3 566 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 RCOR3Q9P2K3 495 aaPredicted RBP13.19□□□□□ -0.3
MECP2-206ENST00000460227 GUCA1BQ9UMX6 200 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 HELZP42694 1942 aaKnown RBP13.19□□□□□ -0.3
MECP2-206ENST00000460227 COL4A2P08572 1712 aa13.19□□□□□ -0.3
MECP2-206ENST00000460227 A0A0D9SEW6 157 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 C3orf70A6NLC5 250 aaPredicted RBP13.18□□□□□ -0.3
MECP2-206ENST00000460227 CHURC1-FNTBB4DL54 471 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 H3BRJ5 948 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 FGF10O15520 208 aaPredicted RBP13.18□□□□□ -0.3
MECP2-206ENST00000460227 DAPK3O43293 454 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 PSTPIP1O43586 416 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 RNF40O75150 1001 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 AMPD1P23109 780 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 ARL4AP40617 200 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 CSKP41240 450 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 MAGEA9P43362 315 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 PEX5P50542 639 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 DPYSL3Q14195 570 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 EIF4HQ15056 248 aaKnown RBP13.18□□□□□ -0.3
MECP2-206ENST00000460227 PITRM1Q5JRX3 1037 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 TMEM31Q5JXX7 168 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 LCE2DQ5TA82 110 aaPredicted RBP13.18□□□□□ -0.3
MECP2-206ENST00000460227 MBLAC2Q68D91 279 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 VSIG1Q86XK7 387 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 SYCE1Q8N0S2 351 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 UMODL1-AS1Q8N2C9 162 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 TMEM105Q8N8V8 129 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 FAF2Q96CS3 445 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 ACE2Q9BYF1 805 aaPredicted RBP13.18□□□□□ -0.3
MECP2-206ENST00000460227 CHRDQ9H2X0 955 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 NOL6Q9H6R4 1146 aaKnown RBP13.18□□□□□ -0.3
MECP2-206ENST00000460227 LZTFL1Q9NQ48 299 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 DDX56Q9NY93 547 aaKnown RBP13.18□□□□□ -0.3
MECP2-206ENST00000460227 THAP10Q9P2Z0 257 aaPredicted RBP13.18□□□□□ -0.3
MECP2-206ENST00000460227 DNAI1Q9UI46 699 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 PCDHA3Q9Y5H8 950 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 COL4A3Q01955 1670 aa13.18□□□□□ -0.3
MECP2-206ENST00000460227 ZNF487B1APH4 448 aa13.17□□□□□ -0.3
MECP2-206ENST00000460227 DCLK1O15075 740 aa13.17□□□□□ -0.3
MECP2-206ENST00000460227 ATP5BP06576 529 aaKnown RBP13.17□□□□□ -0.3
MECP2-206ENST00000460227 RHOCP08134 193 aa13.17□□□□□ -0.3
MECP2-206ENST00000460227 DLDP09622 509 aaKnown RBP13.17□□□□□ -0.3
MECP2-206ENST00000460227 POLR2EP19388 210 aaKnown RBP13.17□□□□□ -0.3
MECP2-206ENST00000460227 CTNNA2P26232 953 aa13.17□□□□□ -0.3
MECP2-206ENST00000460227 TIE1P35590 1138 aa13.17□□□□□ -0.3
MECP2-206ENST00000460227 VASPP50552 380 aaPredicted RBP13.17□□□□□ -0.3
MECP2-206ENST00000460227 SEC13P55735 322 aa13.17□□□□□ -0.3
MECP2-206ENST00000460227 YBEYP58557 167 aaPredicted RBP13.17□□□□□ -0.3
MECP2-206ENST00000460227 GNA12Q03113 381 aa13.17□□□□□ -0.3
MECP2-206ENST00000460227 MMRN1Q13201 1228 aa13.17□□□□□ -0.3
MECP2-206ENST00000460227 ENPP2Q13822 863 aa13.17□□□□□ -0.3
MECP2-206ENST00000460227 KRT81Q14533 505 aa13.17□□□□□ -0.3
MECP2-206ENST00000460227 TAZQ16635 292 aa13.17□□□□□ -0.3
MECP2-206ENST00000460227 PTPRNQ16849 979 aa13.17□□□□□ -0.3
MECP2-206ENST00000460227 FUT11Q495W5 492 aa13.17□□□□□ -0.3
MECP2-206ENST00000460227 C2orf27AQ580R0 203 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms