RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 PRCCQ92733 491 aaPredicted RBP15.39■□□□□ 0.05
ATG4B-213ENST00000460211 TCEAL3Q969E4 200 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 TRIM11Q96F44 468 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 LMLNQ96KR4 655 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 MRGPRX1Q96LB2 322 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 MCEEQ96PE7 176 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.39■□□□□ 0.05
ATG4B-213ENST00000460211 ADAM33Q9BZ11 813 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 TMEM245Q9H330 911 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 FBRSQ9HAH7 460 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 PRDM16Q9HAZ2 1276 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 PCDHGA5Q9Y5G8 931 aa15.39■□□□□ 0.05
ATG4B-213ENST00000460211 CACNA1GO43497 2377 aa15.38■□□□□ 0.05
ATG4B-213ENST00000460211 SRGAP2O75044 1071 aa15.38■□□□□ 0.05
ATG4B-213ENST00000460211 RTN2O75298 545 aa15.38■□□□□ 0.05
ATG4B-213ENST00000460211 KCNK5O95279 499 aa15.38■□□□□ 0.05
ATG4B-213ENST00000460211 GJB6O95452 261 aa15.38■□□□□ 0.05
ATG4B-213ENST00000460211 MYBL1P10243 752 aa15.38■□□□□ 0.05
ATG4B-213ENST00000460211 ACADMP11310 421 aa15.38■□□□□ 0.05
ATG4B-213ENST00000460211 NDUFV2P19404 249 aa15.38■□□□□ 0.05
ATG4B-213ENST00000460211 PRKCHP24723 683 aa15.38■□□□□ 0.05
ATG4B-213ENST00000460211 ADRA1BP35368 520 aa15.38■□□□□ 0.05
ATG4B-213ENST00000460211 GGCXP38435 758 aa15.38■□□□□ 0.05
ATG4B-213ENST00000460211 MPLP40238 635 aa15.38■□□□□ 0.05
ATG4B-213ENST00000460211 ZNF143P52747 638 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-213ENST00000460211 PLK1P53350 603 aa15.38■□□□□ 0.05
ATG4B-213ENST00000460211 ECT2LQ008S8 904 aa15.38■□□□□ 0.05
ATG4B-213ENST00000460211 TSR1Q2NL82 804 aaKnown RBP15.38■□□□□ 0.05
ATG4B-213ENST00000460211 E4F1Q66K89 784 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-213ENST00000460211 SPECC1LQ69YQ0 1117 aa15.38■□□□□ 0.05
ATG4B-213ENST00000460211 C14orf80Q86SX3 495 aa15.38■□□□□ 0.05
ATG4B-213ENST00000460211 TMPRSS6Q8IU80 811 aa15.38■□□□□ 0.05
ATG4B-213ENST00000460211 CENPIQ92674 756 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-213ENST00000460211 ERLEC1Q96DZ1 483 aa15.38■□□□□ 0.05
ATG4B-213ENST00000460211 CNPY3Q9BT09 278 aa15.38■□□□□ 0.05
ATG4B-213ENST00000460211 DUSP15Q9H1R2 295 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-213ENST00000460211 CD248Q9HCU0 757 aa15.38■□□□□ 0.05
ATG4B-213ENST00000460211 TAS2R14Q9NYV8 317 aa15.38■□□□□ 0.05
ATG4B-213ENST00000460211 INTS6Q9UL03 887 aaKnown RBP15.38■□□□□ 0.05
ATG4B-213ENST00000460211 TCRBV5S1A1TA0A578 114 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 DRGXA6NNA5 263 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 E9PAM4 449 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 DDX3XO00571 662 aaKnown RBP eCLIP15.37■□□□□ 0.05
ATG4B-213ENST00000460211 GYPCP04921 128 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 HLA-EP13747 358 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 CAMK2GQ13555 558 aaPredicted RBP15.37■□□□□ 0.05
ATG4B-213ENST00000460211 PTPRNQ16849 979 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 MAP7D1Q3KQU3 841 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 SPDYCQ5MJ68 293 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 PLA2G2CQ5R387 149 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 C6orf118Q5T5N4 469 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 PSAPL1Q6NUJ1 521 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 SETD3Q86TU7 594 aaPredicted RBP15.37■□□□□ 0.05
ATG4B-213ENST00000460211 METTL3Q86U44 580 aaKnown RBP15.37■□□□□ 0.05
ATG4B-213ENST00000460211 OR2T3Q8NH03 318 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 SIPA1Q96FS4 1042 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 MUC3BQ9H195 1237 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 OSBPL2Q9H1P3 480 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 RETREG1Q9H6L5 497 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 MRPL47Q9HD33 250 aaKnown RBP15.37■□□□□ 0.05
ATG4B-213ENST00000460211 ANLNQ9NQW6 1124 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 VPS28Q9UK41 221 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 ERVW-1Q9UQF0 538 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 TBC1D30Q9Y2I9 924 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 SNX10Q9Y5X0 201 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 SCINQ9Y6U3 715 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 CEP295Q9C0D2 2601 aa15.37■□□□□ 0.05
ATG4B-213ENST00000460211 IGLV3-10A0A075B6K4 115 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 AP5Z1O43299 807 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 RNASEH1O60930 286 aaKnown RBP15.36■□□□□ 0.05
ATG4B-213ENST00000460211 NDUFS2O75306 463 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 RHOCP08134 193 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 MZF1P28698 734 aaPredicted RBP15.36■□□□□ 0.05
ATG4B-213ENST00000460211 OR1E1P30953 314 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 CASP14P31944 242 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 HDAC4P56524 1084 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 RPL7AP62424 266 aaKnown RBP15.36■□□□□ 0.05
ATG4B-213ENST00000460211 KRT83P78385 493 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 SHC2P98077 582 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 MAMLD1Q13495 774 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 SH3PXD2AQ5TCZ1 1133 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 PMS2CLQ68D20 193 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 PLEKHA7Q6IQ23 1121 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 CXorf57Q6NSI4 855 aaKnown RBP15.36■□□□□ 0.05
ATG4B-213ENST00000460211 SCYL2Q6P3W7 929 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 SLFN11Q7Z7L1 901 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 DRC7Q8IY82 874 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 APCDD1Q8J025 514 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 NTAN1Q96AB6 310 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 ZYG11BQ9C0D3 744 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 MKRN2Q9H000 416 aaKnown RBP15.36■□□□□ 0.05
ATG4B-213ENST00000460211 ZNHIT6Q9NWK9 470 aaKnown RBP15.36■□□□□ 0.05
ATG4B-213ENST00000460211 PPARGC1AQ9UBK2 798 aaKnown RBP15.36■□□□□ 0.05
ATG4B-213ENST00000460211 CNOT8Q9UFF9 292 aaKnown RBP15.36■□□□□ 0.05
ATG4B-213ENST00000460211 OR12D3Q9UGF7 316 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 ADAMTS1Q9UHI8 967 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 SLC25A13Q9UJS0 675 aa15.36■□□□□ 0.05
ATG4B-213ENST00000460211 TARSL2A2RTX5 802 aaKnown RBP15.35■□□□□ 0.05
ATG4B-213ENST00000460211 I6L893 689 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-213ENST00000460211 CCP110O43303 1012 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms