RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 RPL10LQ96L21 214 aaKnown RBP23.48■■□□□ 1.35
PTPN4-207ENST00000460162 RPRD1AQ96P16 312 aaPredicted RBP23.48■■□□□ 1.35
PTPN4-207ENST00000460162 PPP1R9BQ96SB3 815 aa23.48■■□□□ 1.35
PTPN4-207ENST00000460162 ORAI3Q9BRQ5 295 aa23.48■■□□□ 1.35
PTPN4-207ENST00000460162 NUP62CLQ9H1M0 184 aa23.48■■□□□ 1.35
PTPN4-207ENST00000460162 RRN3Q9NYV6 651 aa23.48■■□□□ 1.35
PTPN4-207ENST00000460162 SLCO3A1Q9UIG8 710 aa23.48■■□□□ 1.35
PTPN4-207ENST00000460162 A0A1W2PP55 124 aa23.47■■□□□ 1.35
PTPN4-207ENST00000460162 FAM221BA6H8Z2 402 aa23.47■■□□□ 1.35
PTPN4-207ENST00000460162 LRRC72A6NJI9 287 aa23.47■■□□□ 1.35
PTPN4-207ENST00000460162 RNASEH2AO75792 299 aaKnown RBP23.47■■□□□ 1.35
PTPN4-207ENST00000460162 FTH1P19P0C7X4 201 aa23.47■■□□□ 1.35
PTPN4-207ENST00000460162 CDH5P33151 784 aaPredicted RBP23.47■■□□□ 1.35
PTPN4-207ENST00000460162 STK19P49842 368 aaPredicted RBP23.47■■□□□ 1.35
PTPN4-207ENST00000460162 CENPCQ03188 943 aa23.47■■□□□ 1.35
PTPN4-207ENST00000460162 NME3Q13232 169 aa23.47■■□□□ 1.35
PTPN4-207ENST00000460162 TMEM35BQ8NCS4 154 aa23.47■■□□□ 1.35
PTPN4-207ENST00000460162 BAHD1Q8TBE0 780 aaPredicted RBP23.47■■□□□ 1.35
PTPN4-207ENST00000460162 ADAMTS14Q8WXS8 1223 aa23.47■■□□□ 1.35
PTPN4-207ENST00000460162 PTPRN2Q92932 1015 aa23.47■■□□□ 1.35
PTPN4-207ENST00000460162 OMDQ99983 421 aa23.47■■□□□ 1.35
PTPN4-207ENST00000460162 ANKRD6Q9Y2G4 727 aa23.47■■□□□ 1.35
PTPN4-207ENST00000460162 SNX11Q9Y5W9 270 aa23.47■■□□□ 1.35
PTPN4-207ENST00000460162 CHD6Q8TD26 2715 aa23.46■■□□□ 1.35
PTPN4-207ENST00000460162 CFAP47Q6ZTR5 3102 aa23.46■■□□□ 1.35
PTPN4-207ENST00000460162 M0QYT0 321 aa23.46■■□□□ 1.35
PTPN4-207ENST00000460162 C5AR1P21730 350 aa23.46■■□□□ 1.35
PTPN4-207ENST00000460162 MZF1P28698 734 aaPredicted RBP23.46■■□□□ 1.35
PTPN4-207ENST00000460162 SLC8A1P32418 973 aa23.46■■□□□ 1.35
PTPN4-207ENST00000460162 SCNN1AP37088 669 aa23.46■■□□□ 1.35
PTPN4-207ENST00000460162 PSMD8P48556 350 aa23.46■■□□□ 1.35
PTPN4-207ENST00000460162 VASPP50552 380 aaPredicted RBP23.46■■□□□ 1.35
PTPN4-207ENST00000460162 GALCP54803 685 aa23.46■■□□□ 1.35
PTPN4-207ENST00000460162 AUHQ13825 339 aaKnown RBP23.46■■□□□ 1.35
PTPN4-207ENST00000460162 RAPGEF1Q13905 1077 aa23.46■■□□□ 1.35
PTPN4-207ENST00000460162 OTUD1Q5VV17 481 aaPredicted RBP23.46■■□□□ 1.35
PTPN4-207ENST00000460162 DPY19L2P1Q6NXN4 242 aa23.46■■□□□ 1.35
PTPN4-207ENST00000460162 NCEH1Q6PIU2 408 aa23.46■■□□□ 1.35
PTPN4-207ENST00000460162 DBX2Q6ZNG2 339 aa23.46■■□□□ 1.35
PTPN4-207ENST00000460162 ADAT2Q7Z6V5 191 aaKnown RBP23.46■■□□□ 1.35
PTPN4-207ENST00000460162 OR2T34Q8NGX1 318 aa23.46■■□□□ 1.35
PTPN4-207ENST00000460162 SETD7Q8WTS6 366 aaKnown RBP23.46■■□□□ 1.35
PTPN4-207ENST00000460162 IGSF8Q969P0 613 aa23.46■■□□□ 1.35
PTPN4-207ENST00000460162 PLCB1Q9NQ66 1216 aa23.46■■□□□ 1.35
PTPN4-207ENST00000460162 ZMIZ1Q9ULJ6 1067 aa23.46■■□□□ 1.35
PTPN4-207ENST00000460162 VANGL2Q9ULK5 521 aa23.46■■□□□ 1.35
PTPN4-207ENST00000460162 TPX2Q9ULW0 747 aaKnown RBP23.46■■□□□ 1.35
PTPN4-207ENST00000460162 STAP1Q9ULZ2 295 aa23.46■■□□□ 1.35
PTPN4-207ENST00000460162 APOBEC2Q9Y235 224 aaKnown RBP23.46■■□□□ 1.35
PTPN4-207ENST00000460162 HS3ST4Q9Y661 456 aa23.46■■□□□ 1.35
PTPN4-207ENST00000460162 WDFY3Q8IZQ1 3526 aa23.45■■□□□ 1.34
PTPN4-207ENST00000460162 A0A1W2PPC4 97 aa23.45■■□□□ 1.34
PTPN4-207ENST00000460162 FAM47DPA6NHR8 397 aa23.45■■□□□ 1.34
PTPN4-207ENST00000460162 C10orf142B7Z368 130 aa23.45■■□□□ 1.34
PTPN4-207ENST00000460162 CYP11B1P15538 503 aa23.45■■□□□ 1.34
PTPN4-207ENST00000460162 RACK1P63244 317 aaKnown RBP23.45■■□□□ 1.34
PTPN4-207ENST00000460162 KCNJ12Q14500 433 aa23.45■■□□□ 1.34
PTPN4-207ENST00000460162 DRAP1Q14919 205 aaPredicted RBP23.45■■□□□ 1.34
PTPN4-207ENST00000460162 C5orf22Q49AR2 442 aa23.45■■□□□ 1.34
PTPN4-207ENST00000460162 CT47A1Q5JQC4 288 aaPredicted RBP23.45■■□□□ 1.34
PTPN4-207ENST00000460162 BRMS1LQ5PSV4 323 aa23.45■■□□□ 1.34
PTPN4-207ENST00000460162 LRSAM1Q6UWE0 723 aa23.45■■□□□ 1.34
PTPN4-207ENST00000460162 SND1Q7KZF4 910 aaKnown RBP eCLIP23.45■■□□□ 1.34
PTPN4-207ENST00000460162 STK40Q8N2I9 435 aa23.45■■□□□ 1.34
PTPN4-207ENST00000460162 CHCHD4Q8N4Q1 142 aa23.45■■□□□ 1.34
PTPN4-207ENST00000460162 AADATQ8N5Z0 425 aa23.45■■□□□ 1.34
PTPN4-207ENST00000460162 SPAG5Q96R06 1193 aa23.45■■□□□ 1.34
PTPN4-207ENST00000460162 FAM129BQ96TA1 746 aa23.45■■□□□ 1.34
PTPN4-207ENST00000460162 NPY6RQ99463 290 aa23.45■■□□□ 1.34
PTPN4-207ENST00000460162 NEUROG2Q9H2A3 272 aa23.45■■□□□ 1.34
PTPN4-207ENST00000460162 PDCL3Q9H2J4 239 aa23.45■■□□□ 1.34
PTPN4-207ENST00000460162 SLC25A13Q9UJS0 675 aa23.45■■□□□ 1.34
PTPN4-207ENST00000460162 FHOD1Q9Y613 1164 aa23.45■■□□□ 1.34
PTPN4-207ENST00000460162 KNL1Q8NG31 2342 aa23.45■■□□□ 1.34
PTPN4-207ENST00000460162 PAGE1O75459 146 aa23.44■■□□□ 1.34
PTPN4-207ENST00000460162 CLDN11O75508 207 aa23.44■■□□□ 1.34
PTPN4-207ENST00000460162 GOT1P17174 413 aa23.44■■□□□ 1.34
PTPN4-207ENST00000460162 EEF1GP26641 437 aaKnown RBP23.44■■□□□ 1.34
PTPN4-207ENST00000460162 CCT8P50990 548 aa23.44■■□□□ 1.34
PTPN4-207ENST00000460162 ADPRHP54922 357 aa23.44■■□□□ 1.34
PTPN4-207ENST00000460162 SUZ12Q15022 739 aaKnown RBP23.44■■□□□ 1.34
PTPN4-207ENST00000460162 HSP90AA4PQ58FG1 418 aa23.44■■□□□ 1.34
PTPN4-207ENST00000460162 LAYNQ6UX15 382 aa23.44■■□□□ 1.34
PTPN4-207ENST00000460162 DSG4Q86SJ6 1040 aa23.44■■□□□ 1.34
PTPN4-207ENST00000460162 ZCCHC14Q8WYQ9 949 aaKnown RBP23.44■■□□□ 1.34
PTPN4-207ENST00000460162 ALG14Q96F25 216 aa23.44■■□□□ 1.34
PTPN4-207ENST00000460162 PGAP3Q96FM1 320 aaPredicted RBP23.44■■□□□ 1.34
PTPN4-207ENST00000460162 ACE2Q9BYF1 805 aaPredicted RBP23.44■■□□□ 1.34
PTPN4-207ENST00000460162 PIGVQ9NUD9 493 aa23.44■■□□□ 1.34
PTPN4-207ENST00000460162 TMEM51Q9NW97 253 aa23.44■■□□□ 1.34
PTPN4-207ENST00000460162 ARHGEF38Q9NXL2 777 aa23.44■■□□□ 1.34
PTPN4-207ENST00000460162 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.44■■□□□ 1.34
PTPN4-207ENST00000460162 PAXBP1Q9Y5B6 917 aa23.44■■□□□ 1.34
PTPN4-207ENST00000460162 CABIN1Q9Y6J0 2220 aa23.44■■□□□ 1.34
PTPN4-207ENST00000460162 ZZEF1O43149 2961 aa23.43■■□□□ 1.34
PTPN4-207ENST00000460162 SPEGQ15772 3267 aa23.43■■□□□ 1.34
PTPN4-207ENST00000460162 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.43■■□□□ 1.34
PTPN4-207ENST00000460162 VILLO15195 856 aa23.43■■□□□ 1.34
PTPN4-207ENST00000460162 PCDHGA12O60330 932 aa23.43■■□□□ 1.34
PTPN4-207ENST00000460162 IL1BP01584 269 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms