RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 RBM44Q6ZP01 1051 aaKnown RBP3.71□□□□□ -1.82
VPS8-215ENST00000460158 ANKS1BQ7Z6G8 1248 aa3.71□□□□□ -1.82
VPS8-215ENST00000460158 TMEM57Q8N5G2 664 aa3.71□□□□□ -1.82
VPS8-215ENST00000460158 EXD3Q8N9H8 876 aa3.71□□□□□ -1.82
VPS8-215ENST00000460158 PIGKQ92643 395 aa3.71□□□□□ -1.82
VPS8-215ENST00000460158 ARRDC3Q96B67 414 aa3.71□□□□□ -1.82
VPS8-215ENST00000460158 KTI12Q96EK9 354 aaPredicted RBP3.71□□□□□ -1.82
VPS8-215ENST00000460158 P2RY11Q96G91 374 aa3.71□□□□□ -1.82
VPS8-215ENST00000460158 UBXN10Q96LJ8 280 aa3.71□□□□□ -1.82
VPS8-215ENST00000460158 COG8Q96MW5 612 aa3.71□□□□□ -1.82
VPS8-215ENST00000460158 PIGSQ96S52 555 aa3.71□□□□□ -1.82
VPS8-215ENST00000460158 PYM1Q9BRP8 204 aaKnown RBP3.71□□□□□ -1.82
VPS8-215ENST00000460158 ABHD14AQ9BUJ0 271 aa3.71□□□□□ -1.82
VPS8-215ENST00000460158 HERC2P3Q9BVR0 1158 aa3.71□□□□□ -1.82
VPS8-215ENST00000460158 SFXN1Q9H9B4 322 aa3.71□□□□□ -1.82
VPS8-215ENST00000460158 MTMR4Q9NYA4 1195 aa3.71□□□□□ -1.82
VPS8-215ENST00000460158 RRN3Q9NYV6 651 aa3.71□□□□□ -1.82
VPS8-215ENST00000460158 KLHL13Q9P2N7 655 aa3.71□□□□□ -1.82
VPS8-215ENST00000460158 AFG3L2Q9Y4W6 797 aa3.71□□□□□ -1.82
VPS8-215ENST00000460158 PABPN1LA6NDY0 278 aaKnown RBP3.7□□□□□ -1.82
VPS8-215ENST00000460158 STX16-NPEPL1H3BU86 382 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 STX16O14662 325 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 INPPL1O15357 1258 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 HNRNPRO43390 633 aaKnown RBP3.7□□□□□ -1.82
VPS8-215ENST00000460158 HMMRO75330 724 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 MTA2O94776 668 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 AGR2O95994 175 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 PLAUP00749 431 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 TUBB4AP04350 444 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 CSF1P09603 554 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 CDK4P11802 303 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 LYL1P12980 280 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 ACP5P13686 325 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 CHN1P15882 459 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 HOXA7P31268 230 aaPredicted RBP3.7□□□□□ -1.82
VPS8-215ENST00000460158 MAPK9P45984 424 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 PAPOLAP51003 745 aaKnown RBP3.7□□□□□ -1.82
VPS8-215ENST00000460158 B4GALNT1Q00973 533 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 CDK18Q07002 472 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 FOXF2Q12947 444 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 GLE1Q53GS7 698 aaKnown RBP3.7□□□□□ -1.82
VPS8-215ENST00000460158 WDR45BQ5MNZ6 344 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 MEX3CQ5U5Q3 659 aaKnown RBP3.7□□□□□ -1.82
VPS8-215ENST00000460158 MZT2BQ6NZ67 158 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 MIS18BP1Q6P0N0 1132 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 TMEM88Q6PEY1 159 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 ZNF474Q6S9Z5 364 aaPredicted RBP3.7□□□□□ -1.82
VPS8-215ENST00000460158 UEVLDQ8IX04 471 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 NDUFAF2Q8N183 169 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 GALNT16Q8N428 558 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 PTGR2Q8N8N7 351 aaPredicted RBP3.7□□□□□ -1.82
VPS8-215ENST00000460158 FSIP1Q8NA03 581 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 ADPRHL1Q8NDY3 354 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 LINS1Q8NG48 757 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 CEP70Q8NHQ1 597 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 ATP2A3Q93084 1043 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 ZNF347Q96SE7 839 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 NPAS1Q99742 590 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 QTRT1Q9BXR0 403 aaKnown RBP3.7□□□□□ -1.82
VPS8-215ENST00000460158 CLPBQ9H078 707 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 TMLHEQ9NVH6 421 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.7□□□□□ -1.82
VPS8-215ENST00000460158 FLRT1Q9NZU1 646 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 ACAD8Q9UKU7 415 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 DERAQ9Y315 318 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 LMTK3Q96Q04 1460 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 EMSYQ7Z589 1322 aa3.7□□□□□ -1.82
VPS8-215ENST00000460158 SMIM35A0A1B0GVV1 85 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 SLC22A23A1A5C7 686 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 CGB1A6NKQ9 187 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 PPP6CO00743 305 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 DSCR3O14972 297 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 AKR1A1P14550 325 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 TGM2P21980 687 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 RPS6KB1P23443 525 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 PRPH2P23942 346 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 EPHB2P29323 1055 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 ARHGAP25P42331 645 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 MCM2P49736 904 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 EFR3AQ14156 821 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 TAF12Q16514 161 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 LVRNQ6Q4G3 990 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 MDGA2Q7Z553 956 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 RPAINQ86UA6 219 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 LMNTD2Q8IXW0 634 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 OR8H2Q8N162 312 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.69□□□□□ -1.82
VPS8-215ENST00000460158 KCNJ9Q92806 393 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 CCDC47Q96A33 483 aaKnown RBP3.69□□□□□ -1.82
VPS8-215ENST00000460158 RBM17Q96I25 401 aaKnown RBP3.69□□□□□ -1.82
VPS8-215ENST00000460158 CDHR1Q96JP9 859 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 TBATAQ96M53 351 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 HDHD5Q9BXW7 423 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 DNAJC16Q9Y2G8 782 aa3.69□□□□□ -1.82
VPS8-215ENST00000460158 RRP7AQ9Y3A4 280 aaKnown RBP3.69□□□□□ -1.82
VPS8-215ENST00000460158 A6NCN8 305 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 NPIPB13A6NJU9 1138 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 NPIPB5A8MRT5 1133 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 NPIPB4C9JG80 1138 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 J3KRW8 73 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms