RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 MAVSQ7Z434 540 aa18.56■□□□□ 0.56
HPS3-202ENST00000460120 ENDOVQ8N8Q3 282 aaKnown RBP18.56■□□□□ 0.56
HPS3-202ENST00000460120 PIWIL2Q8TC59 973 aaKnown RBP18.56■□□□□ 0.56
HPS3-202ENST00000460120 MIEF2Q96C03 454 aa18.56■□□□□ 0.56
HPS3-202ENST00000460120 SLC2A13Q96QE2 648 aa18.56■□□□□ 0.56
HPS3-202ENST00000460120 WDCPQ9H6R7 721 aa18.56■□□□□ 0.56
HPS3-202ENST00000460120 MKS1Q9NXB0 559 aa18.56■□□□□ 0.56
HPS3-202ENST00000460120 OR12D3Q9UGF7 316 aa18.56■□□□□ 0.56
HPS3-202ENST00000460120 TAGLN3Q9UI15 199 aa18.56■□□□□ 0.56
HPS3-202ENST00000460120 ST3GAL5Q9UNP4 418 aa18.56■□□□□ 0.56
HPS3-202ENST00000460120 INPP5FQ9Y2H2 1132 aa18.56■□□□□ 0.56
HPS3-202ENST00000460120 DOCK3Q8IZD9 2030 aa18.56■□□□□ 0.56
HPS3-202ENST00000460120 ARHGAP42A6NI28 874 aa18.56■□□□□ 0.56
HPS3-202ENST00000460120 BIRC5O15392 142 aa18.56■□□□□ 0.56
HPS3-202ENST00000460120 LTFP02788 710 aa18.56■□□□□ 0.56
HPS3-202ENST00000460120 SPRYD7Q5W111 196 aa18.56■□□□□ 0.56
HPS3-202ENST00000460120 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.56■□□□□ 0.56
HPS3-202ENST00000460120 HIPK4Q8NE63 616 aa18.56■□□□□ 0.56
HPS3-202ENST00000460120 SPATA22Q8NHS9 363 aa18.56■□□□□ 0.56
HPS3-202ENST00000460120 DNAJC9Q8WXX5 260 aa18.56■□□□□ 0.56
HPS3-202ENST00000460120 NT5C3BQ969T7 300 aa18.56■□□□□ 0.56
HPS3-202ENST00000460120 MLPHQ9BV36 600 aaPredicted RBP18.56■□□□□ 0.56
HPS3-202ENST00000460120 CCDC106Q9BWC9 280 aa18.56■□□□□ 0.56
HPS3-202ENST00000460120 GTF2IRD1Q9UHL9 959 aa18.56■□□□□ 0.56
HPS3-202ENST00000460120 BAG2O95816 211 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 RALBP11234 206 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 GP5P40197 560 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 CCR10P46092 362 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 BRCC3P46736 316 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 GLRBP48167 497 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 MAP2K5Q13163 448 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 PAFAH1B3Q15102 231 aaKnown RBP18.55■□□□□ 0.56
HPS3-202ENST00000460120 XKR4Q5GH76 650 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 FSTL4Q6MZW2 842 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 CXCL17Q6UXB2 119 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 TIFABQ6ZNK6 161 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 PSTKQ8IV42 348 aaKnown RBP18.55■□□□□ 0.56
HPS3-202ENST00000460120 GSTCDQ8NEC7 633 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 PPP4R1Q8TF05 950 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 BFARQ9NZS9 450 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 RCOR3Q9P2K3 495 aaPredicted RBP18.55■□□□□ 0.56
HPS3-202ENST00000460120 TOMM70O94826 608 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 PROCP04070 461 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 EPHB1P54762 984 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 EML3Q32P44 896 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 RALGPS1Q5JS13 557 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 CCDC124Q96CT7 223 aaKnown RBP18.55■□□□□ 0.56
HPS3-202ENST00000460120 TMEM209Q96SK2 561 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 COLEC11Q9BWP8 271 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 OSBPL1AQ9BXW6 950 aa18.55■□□□□ 0.56
HPS3-202ENST00000460120 F8W810 466 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 NVLO15381 856 aaKnown RBP18.54■□□□□ 0.56
HPS3-202ENST00000460120 IL1BP01584 269 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 THP07101 528 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 CNTFP26441 200 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 CPT1AP50416 773 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 FSCN1Q16658 493 aaKnown RBP18.54■□□□□ 0.56
HPS3-202ENST00000460120 RIPOR1Q6ZS17 1223 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 RAPH1Q70E73 1250 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 SCUBE1Q8IWY4 988 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.54■□□□□ 0.56
HPS3-202ENST00000460120 SPATA6LQ8N4H0 392 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 TTC1Q99614 292 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 FAM105AQ9NUU6 356 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 COPG2Q9UBF2 871 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 DCDC2Q9UHG0 476 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 FBXW11Q9UKB1 542 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 SLC39A10Q9ULF5 831 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 APOBEC2Q9Y235 224 aaKnown RBP18.54■□□□□ 0.56
HPS3-202ENST00000460120 GABRDO14764 452 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 PDE5AO76074 875 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 USP1O94782 785 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 LRIG2O94898 1065 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 CPA3P15088 417 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 NMBRP28336 390 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 C1orf146Q5VVC0 180 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 LIMS2Q7Z4I7 341 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 TMPRSS6Q8IU80 811 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 ULK2Q8IYT8 1036 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 SCAMP5Q8TAC9 235 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 MYLPFQ96A32 169 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 SORT1Q99523 831 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 LRRC40Q9H9A6 602 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 EIF2B3Q9NR50 452 aaKnown RBP18.54■□□□□ 0.56
HPS3-202ENST00000460120 STOML1Q9UBI4 398 aa18.54■□□□□ 0.56
HPS3-202ENST00000460120 A0A096LPK6 155 aa18.53■□□□□ 0.56
HPS3-202ENST00000460120 GOLGA8QA0A0J9YX86 632 aa18.53■□□□□ 0.56
HPS3-202ENST00000460120 GOLGA8OA6NCC3 632 aa18.53■□□□□ 0.56
HPS3-202ENST00000460120 E9PBE3 544 aa18.53■□□□□ 0.56
HPS3-202ENST00000460120 GOLGA8NF8WBI6 632 aa18.53■□□□□ 0.56
HPS3-202ENST00000460120 PHGDHO43175 533 aaKnown RBP18.53■□□□□ 0.56
HPS3-202ENST00000460120 KLHL41O60662 606 aa18.53■□□□□ 0.56
HPS3-202ENST00000460120 AP2A1O95782 977 aa18.53■□□□□ 0.56
HPS3-202ENST00000460120 PGK1P00558 417 aa18.53■□□□□ 0.56
HPS3-202ENST00000460120 SERPINE1P05121 402 aa18.53■□□□□ 0.56
HPS3-202ENST00000460120 GARSP41250 739 aaKnown RBP18.53■□□□□ 0.56
HPS3-202ENST00000460120 ANKRD20A4Q4UJ75 823 aa18.53■□□□□ 0.56
HPS3-202ENST00000460120 TIGD5Q53EQ6 642 aa18.53■□□□□ 0.56
HPS3-202ENST00000460120 NAPRTQ6XQN6 538 aa18.53■□□□□ 0.56
HPS3-202ENST00000460120 SCG3Q8WXD2 468 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms