RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 PRELID1Q9Y255 219 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 ACTR3P61158 418 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 PLIN5Q00G26 463 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 RHAGQ02094 409 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 MGAT5Q09328 741 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 OASLQ15646 514 aaKnown RBP9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 EXOC3L1Q86VI1 746 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 FBXO36Q8NEA4 188 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 NSUN4Q96CB9 384 aaKnown RBP9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 RBM12Q9NTZ6 932 aaKnown RBP9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 PCDHGC5Q9Y5F6 944 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 SPATA31A3Q5VYP0 1347 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 TTC3P53804 2025 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 RAD51CO43502 376 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 CYP7B1O75881 506 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 NDUFB10O96000 172 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 PCBP1Q15365 356 aaKnown RBP eCLIP9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 FAM117BQ6P1L5 589 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 FBXO39Q8N4B4 442 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 S100ZQ8WXG8 99 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 ZNF184Q99676 751 aaPredicted RBP9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 GNPTGQ9UJJ9 305 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 FBXO10Q9UK96 956 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 SLC25A12O75746 678 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 CELF2O95319 508 aaKnown RBP9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 GYPCP04921 128 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 CCDC166P0CW27 439 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 CYP2B6P20813 491 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 CD151P48509 253 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 CCT3P49368 545 aaKnown RBP9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 ATN1P54259 1190 aaPredicted RBP9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 ARPC4P59998 168 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 PTSQ03393 145 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 SPIRE1Q08AE8 756 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 R3HDM1Q15032 1099 aaKnown RBP9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 IRGCQ6NXR0 463 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 DHFR2Q86XF0 187 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 ADHFE1Q8IWW8 467 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 CCDC36Q8IYA8 594 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 MYDGFQ969H8 173 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 TMEM79Q9BSE2 394 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 DSN1Q9H410 356 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 FKBP14Q9NWM8 211 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 DAGLAQ9Y4D2 1042 aa9.05□□□□□ -0.96
SHROOM4-203ENST00000460112 A0A087WWV3 80 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 CBX4O00257 560 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 POLR2EP19388 210 aaKnown RBP9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 VPS72Q15906 364 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 ANGEL2Q5VTE6 544 aaKnown RBP9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 FIG4Q92562 907 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 LENG9Q96B70 501 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 VAT1Q99536 393 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 PRR12Q9ULL5 1215 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 IQSEC2Q5JU85 1478 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 FGF10O15520 208 aaPredicted RBP9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 TUBA1BP68363 451 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 RPL19P84098 196 aaKnown RBP9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 SAMD4BQ5PRF9 694 aaKnown RBP9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 TUBA1AQ71U36 451 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 NECAB2Q7Z6G3 386 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 PEX5LQ8IYB4 626 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 PJA1Q8NG27 643 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 TPCN2Q8NHX9 752 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 RERGQ96A58 199 aaPredicted RBP9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 A1CFQ9NQ94 594 aaKnown RBP9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 NDOR1Q9UHB4 597 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 PHF11Q9UIL8 331 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 KCNH1O95259 989 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 MYBP10242 640 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 CCR4P51679 360 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 ACLYP53396 1101 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 RAB25P57735 213 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 ATP1A4Q13733 1029 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 TBC1D25Q3MII6 688 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 FAM20CQ8IXL6 584 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 UBA3Q8TBC4 463 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 NSMCE2Q96MF7 247 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 IRAK3Q9Y616 596 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 CCNT2O60583 730 aaKnown RBP9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 ANXA5P08758 320 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 DGKAP23743 735 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 THOP1P52888 689 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 HUNKP57058 714 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 MPP3Q13368 585 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 ZMYND11Q15326 602 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 TOMM20Q15388 145 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 PKN1Q16512 942 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 HLFQ16534 295 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 TBCELQ5QJ74 424 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 COLGALT2Q8IYK4 626 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 CCDC33Q8N5R6 958 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 NMD3Q96D46 503 aaKnown RBP9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 TCF7L2Q9NQB0 619 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 CKLFQ9UBR5 152 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 GPN3Q9UHW5 284 aaPredicted RBP9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 ANGPT4Q9Y264 503 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 PCDHB5Q9Y5E4 795 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 EVPLQ92817 2033 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 LMO7Q8WWI1 1683 aa9.04□□□□□ -0.96
SHROOM4-203ENST00000460112 B3GAT3O94766 335 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms