RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 FANCLQ9NW38 375 aa11.71□□□□□ -0.53
PRAMEF35P-201ENST00000458709 STRIP2Q9ULQ0 834 aa11.71□□□□□ -0.53
PRAMEF35P-201ENST00000458709 SPTA1P02549 2419 aa11.71□□□□□ -0.54
PRAMEF35P-201ENST00000458709 LRRC72A6NJI9 287 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 TLR4O00206 839 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 TRIM38O00635 465 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 KLK10O43240 276 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 SIN3BO75182 1162 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 RNASEH2AO75792 299 aaKnown RBP11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 ASS1P00966 412 aaKnown RBP11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 ATP5BP06576 529 aaKnown RBP11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 KRT13P13646 458 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 RXRGP48443 463 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 PPP2CBP62714 309 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 PPP2CAP67775 309 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 VAC14Q08AM6 782 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 INCA1Q0VD86 236 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 TRIP4Q15650 581 aaPredicted RBP11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 CST6Q15828 149 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 MAN2A1Q16706 1144 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 SGSM1Q2NKQ1 1148 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 PPP1R26Q5T8A7 1209 aaPredicted RBP11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 KIAA1614Q5VZ46 1190 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 CEP135Q66GS9 1140 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 SARM1Q6SZW1 724 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 PRICKLE2Q7Z3G6 844 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 AOPEPQ8N6M6 819 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 OR2T34Q8NGX1 318 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 MED8Q96G25 268 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 NT5C1AQ9BXI3 368 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 DUSP16Q9BY84 665 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 TRIM4Q9C037 500 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 SUN2Q9UH99 717 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 SCML1Q9UN30 329 aa11.7□□□□□ -0.54
PRAMEF35P-201ENST00000458709 A0A1B0GTH6 734 aa11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 SIGLEC6O43699 453 aa11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 CD58P19256 250 aa11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 POLR2EP19388 210 aaKnown RBP11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 TRIM21P19474 475 aaKnown RBP11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 CCR5P51681 352 aa11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 ADPRHP54922 357 aa11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 YWHAGP61981 247 aaKnown RBP eCLIP11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 PPP3CAQ08209 521 aa11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 KRT39Q6A163 491 aa11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 SV2AQ7L0J3 742 aa11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 LUZP1Q86V48 1076 aa11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 GAS2L3Q86XJ1 694 aa11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 MMAAQ8IVH4 418 aaKnown RBP11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 AADATQ8N5Z0 425 aa11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 SNRNP27Q8WVK2 155 aaKnown RBP11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 NDRG1Q92597 394 aaKnown RBP11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 TAF4BQ92750 862 aa11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 TMA16Q96EY4 203 aaKnown RBP11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 OMDQ99983 421 aa11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 TUBGCP2Q9BSJ2 902 aa11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 ERVMER34-1Q9H9K5 563 aa11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 FZD4Q9ULV1 537 aa11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 DAAM1Q9Y4D1 1078 aa11.69□□□□□ -0.54
PRAMEF35P-201ENST00000458709 LGALS16A8MUM7 142 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 BECN2A8MW95 431 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 MSI1O43347 362 aaKnown RBP11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 RNASEH1O60930 286 aaKnown RBP11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 USP12O75317 370 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 DXOO77932 396 aaKnown RBP11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 HLA-DRAP01903 254 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 PIK3CAP42336 1068 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 PSMD8P48556 350 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 FMO5P49326 533 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 HARS2P49590 506 aaKnown RBP11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 CSRP3P50461 194 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 DAB2P98082 770 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 E2F1Q01094 437 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 KRT31Q15323 416 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 HNRNPA1L2Q32P51 320 aaKnown RBP11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 SLC45A4Q5BKX6 768 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 CDCP2Q5VXM1 449 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 NAPEPLDQ6IQ20 393 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 BHLHA9Q7RTU4 235 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 PIGZQ86VD9 579 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 OXR1Q8N573 874 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 OR14C36Q8NHC7 312 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 LMO3Q8TAP4 145 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 EEF2KMTQ96G04 330 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 VCPIP1Q96JH7 1222 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 MRGPRX3Q96LB0 322 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 APOBEC3GQ9HC16 384 aaKnown RBP11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 ASCL3Q9NQ33 180 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 SFMBT1Q9UHJ3 866 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 STOML2Q9UJZ1 356 aa11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 ARID1BQ8NFD5 2236 aaPredicted RBP11.68□□□□□ -0.54
PRAMEF35P-201ENST00000458709 A0A1W2PQC6 194 aa11.67□□□□□ -0.54
PRAMEF35P-201ENST00000458709 LATO43561 262 aa11.67□□□□□ -0.54
PRAMEF35P-201ENST00000458709 TBL1XO60907 577 aa11.67□□□□□ -0.54
PRAMEF35P-201ENST00000458709 AFPP02771 609 aaKnown RBP11.67□□□□□ -0.54
PRAMEF35P-201ENST00000458709 ATP1A3P13637 1013 aa11.67□□□□□ -0.54
PRAMEF35P-201ENST00000458709 SLC8A1P32418 973 aa11.67□□□□□ -0.54
PRAMEF35P-201ENST00000458709 MXI1P50539 228 aa11.67□□□□□ -0.54
PRAMEF35P-201ENST00000458709 ERVPABLB-1P60509 514 aa11.67□□□□□ -0.54
PRAMEF35P-201ENST00000458709 TPM4P67936 248 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms