RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 C2orf49Q9BVC5 232 aaPredicted RBP16.61■□□□□ 0.25
CD28-203ENST00000458610 MUC3BQ9H195 1237 aa16.61■□□□□ 0.25
CD28-203ENST00000458610 RBSNQ9H1K0 784 aa16.61■□□□□ 0.25
CD28-203ENST00000458610 SLC25A13Q9UJS0 675 aa16.61■□□□□ 0.25
CD28-203ENST00000458610 I6L893 689 aaPredicted RBP16.6■□□□□ 0.25
CD28-203ENST00000458610 AKR1B10O60218 316 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 FOXD2O60548 495 aaPredicted RBP16.6■□□□□ 0.25
CD28-203ENST00000458610 RNASEH1O60930 286 aaKnown RBP16.6■□□□□ 0.25
CD28-203ENST00000458610 CNTN5O94779 1100 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 ACADMP11310 421 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 RHOQP17081 205 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 NDUFV2P19404 249 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 OXTRP30559 389 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 L1CAMP32004 1257 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 HTR7P34969 479 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 P2RY2P41231 377 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 VASPP50552 380 aaPredicted RBP16.6■□□□□ 0.25
CD28-203ENST00000458610 ZBTB16Q05516 673 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 MAPK8IP2Q13387 824 aaPredicted RBP16.6■□□□□ 0.25
CD28-203ENST00000458610 SLC18A3Q16572 532 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 ALFQ53S48 1182 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 SPDYCQ5MJ68 293 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 RWDD4Q6NW29 188 aaKnown RBP16.6■□□□□ 0.25
CD28-203ENST00000458610 KIAA1324Q6UXG2 1013 aaKnown RBP16.6■□□□□ 0.25
CD28-203ENST00000458610 TMPRSS6Q8IU80 811 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 FAM160A2Q8N612 972 aaPredicted RBP16.6■□□□□ 0.25
CD28-203ENST00000458610 TBC1D31Q96DN5 1066 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 SIPA1Q96FS4 1042 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 MRGPRX1Q96LB2 322 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 CCDC42Q96M95 316 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 EPAS1Q99814 870 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 CD248Q9HCU0 757 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 TMPRSS4Q9NRS4 437 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 ABHD10Q9NUJ1 306 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 MPP6Q9NZW5 540 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 LCMT1Q9UIC8 334 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 SNX10Q9Y5X0 201 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 FANCMQ8IYD8 2048 aa16.6■□□□□ 0.25
CD28-203ENST00000458610 ILVBLA1L0T0 632 aa16.59■□□□□ 0.25
CD28-203ENST00000458610 ATMINO43313 823 aaPredicted RBP16.59■□□□□ 0.25
CD28-203ENST00000458610 PRPSAP2O60256 369 aa16.59■□□□□ 0.25
CD28-203ENST00000458610 LRP3O75074 770 aa16.59■□□□□ 0.25
CD28-203ENST00000458610 MFAP3LO75121 409 aa16.59■□□□□ 0.25
CD28-203ENST00000458610 MZF1P28698 734 aaPredicted RBP16.59■□□□□ 0.25
CD28-203ENST00000458610 DPP6P42658 865 aa16.59■□□□□ 0.25
CD28-203ENST00000458610 MAPKAPK2P49137 400 aa16.59■□□□□ 0.25
CD28-203ENST00000458610 ADKP55263 362 aaKnown RBP16.59■□□□□ 0.25
CD28-203ENST00000458610 PIGHQ14442 188 aaPredicted RBP16.59■□□□□ 0.25
CD28-203ENST00000458610 LPAL2Q16609 132 aa16.59■□□□□ 0.25
CD28-203ENST00000458610 HNRNPA1L2Q32P51 320 aaKnown RBP16.59■□□□□ 0.25
CD28-203ENST00000458610 PLK5Q496M5 336 aa16.59■□□□□ 0.25
CD28-203ENST00000458610 LPCAT2Q7L5N7 544 aa16.59■□□□□ 0.25
CD28-203ENST00000458610 KBTBD6Q86V97 674 aa16.59■□□□□ 0.25
CD28-203ENST00000458610 PSTKQ8IV42 348 aaKnown RBP16.59■□□□□ 0.25
CD28-203ENST00000458610 CCDC185Q8N715 623 aa16.59■□□□□ 0.25
CD28-203ENST00000458610 MRFAP1L1Q96HT8 127 aa16.59■□□□□ 0.25
CD28-203ENST00000458610 ITM2CQ9NQX7 267 aa16.59■□□□□ 0.25
CD28-203ENST00000458610 IP6K2Q9UHH9 426 aa16.59■□□□□ 0.25
CD28-203ENST00000458610 FZD10Q9ULW2 581 aa16.59■□□□□ 0.25
CD28-203ENST00000458610 PCDHGA5Q9Y5G8 931 aa16.59■□□□□ 0.25
CD28-203ENST00000458610 MYO18AQ92614 2054 aaKnown RBP16.58■□□□□ 0.25
CD28-203ENST00000458610 EDDM13A0A1B0GTR0 161 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 AP5Z1O43299 807 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 H2AFZP0C0S5 128 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 HLA-EP13747 358 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 IRAK1P51617 712 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 ZNF135P52742 658 aaPredicted RBP16.58■□□□□ 0.24
CD28-203ENST00000458610 GALCP54803 685 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 OGDHQ02218 1023 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 SLC20A2Q08357 652 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 TBX2Q13207 712 aaPredicted RBP16.58■□□□□ 0.24
CD28-203ENST00000458610 MAP7D1Q3KQU3 841 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 RAB6CQ53S08 254 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 ERMARDQ5T6L9 678 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 RETSATQ6NUM9 610 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 H2AFVQ71UI9 128 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 TFAP2DQ7Z6R9 452 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 RLN3Q8WXF3 142 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 CTNNBL1Q8WYA6 563 aaPredicted RBP16.58■□□□□ 0.24
CD28-203ENST00000458610 ALG14Q96F25 216 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 MRGPRX3Q96LB0 322 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 RAB6CQ9H0N0 254 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 THAP2Q9H0W7 228 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 DUSP15Q9H1R2 295 aaPredicted RBP16.58■□□□□ 0.24
CD28-203ENST00000458610 CATSPERBQ9H7T0 1116 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 PRSS16Q9NQE7 514 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 SCML1Q9UN30 329 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 INVSQ9Y283 1065 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 OR51B4Q9Y5P0 310 aa16.58■□□□□ 0.24
CD28-203ENST00000458610 CXorf51AA0A1B0GTR3 108 aa16.57■□□□□ 0.24
CD28-203ENST00000458610 MYO1FO00160 1098 aa16.57■□□□□ 0.24
CD28-203ENST00000458610 DCLK1O15075 740 aa16.57■□□□□ 0.24
CD28-203ENST00000458610 NDUFS2O75306 463 aa16.57■□□□□ 0.24
CD28-203ENST00000458610 LRIG2O94898 1065 aa16.57■□□□□ 0.24
CD28-203ENST00000458610 DNTTP04053 509 aa16.57■□□□□ 0.24
CD28-203ENST00000458610 CYP1A2P05177 515 aa16.57■□□□□ 0.24
CD28-203ENST00000458610 PCK1P35558 622 aa16.57■□□□□ 0.24
CD28-203ENST00000458610 CTSOP43234 321 aaPredicted RBP16.57■□□□□ 0.24
CD28-203ENST00000458610 ZNF75DP51815 510 aa16.57■□□□□ 0.24
CD28-203ENST00000458610 GFPT1Q06210 699 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms