RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 SLC45A4Q5BKX6 768 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 PRAMEF14Q5SWL7 426 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 HES3Q5TGS1 186 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 NAPEPLDQ6IQ20 393 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 TAC4Q86UU9 113 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 IQCHQ86VS3 1027 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 CFAP52Q8N1V2 620 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 PPM1KQ8N3J5 372 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 MFSD2AQ8NA29 543 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 OR14C36Q8NHC7 312 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 SNIP1Q8TAD8 396 aaKnown RBP10.78□□□□□ -0.68
HDLBP-227ENST00000458564 LMO3Q8TAP4 145 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 PTPRN2Q92932 1015 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 BTN2A3PQ96KV6 586 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 SPAG5Q96R06 1193 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 GTPBP4Q9BZE4 634 aaKnown RBP10.78□□□□□ -0.68
HDLBP-227ENST00000458564 PRORYQ9H606 182 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 SLCO3A1Q9UIG8 710 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 PCDHB4Q9Y5E5 795 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 ATP6V1DQ9Y5K8 247 aa10.78□□□□□ -0.68
HDLBP-227ENST00000458564 ARID1BQ8NFD5 2236 aaPredicted RBP10.78□□□□□ -0.68
HDLBP-227ENST00000458564 NYNRINQ9P2P1 1898 aaKnown RBP10.77□□□□□ -0.69
HDLBP-227ENST00000458564 TLX3O43711 291 aaPredicted RBP10.77□□□□□ -0.69
HDLBP-227ENST00000458564 APOEP02649 317 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 GPD2P43304 727 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 ACADSBP45954 432 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 PPP2CBP62714 309 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 PPP2CAP67775 309 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 SULT2A1Q06520 285 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 TARDBPQ13148 414 aaKnown RBP eCLIP10.77□□□□□ -0.69
HDLBP-227ENST00000458564 EIF4EBP2Q13542 120 aaPredicted RBP10.77□□□□□ -0.69
HDLBP-227ENST00000458564 TTC39BQ5VTQ0 682 aaPredicted RBP10.77□□□□□ -0.69
HDLBP-227ENST00000458564 RNF219Q5W0B1 726 aaPredicted RBP10.77□□□□□ -0.69
HDLBP-227ENST00000458564 APCDD1Q8J025 514 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 FMR1NBQ8N0W7 255 aaPredicted RBP10.77□□□□□ -0.69
HDLBP-227ENST00000458564 STK40Q8N2I9 435 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 EID2Q8N6I1 236 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 LSM14AQ8ND56 463 aaKnown RBP10.77□□□□□ -0.69
HDLBP-227ENST00000458564 PIP4K2CQ8TBX8 421 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 ADAM32Q8TC27 787 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 STK32AQ8WU08 396 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 FRS2Q8WU20 508 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 KAT5Q92993 513 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 FAM149B1Q96BN6 582 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 CEP63Q96MT8 703 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 DCBLD2Q96PD2 775 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 MIS12Q9H081 205 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 ARHGAP20Q9P2F6 1191 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 TJP2Q9UDY2 1190 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 XPO7Q9UIA9 1087 aaKnown RBP10.77□□□□□ -0.69
HDLBP-227ENST00000458564 CNTN6Q9UQ52 1028 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 NAALADL1Q9UQQ1 740 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 DMTF1Q9Y222 760 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 MGAQ8IWI9 3026 aa10.77□□□□□ -0.69
HDLBP-227ENST00000458564 ATMQ13315 3056 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 A0A1B0GVM2 712 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 TRIM49BA6NDI0 452 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 TCAF2A6NFQ2 919 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 ATXN7O15265 892 aaPredicted RBP10.76□□□□□ -0.69
HDLBP-227ENST00000458564 RRP8O43159 456 aaKnown RBP10.76□□□□□ -0.69
HDLBP-227ENST00000458564 PLRG1O43660 514 aaKnown RBP10.76□□□□□ -0.69
HDLBP-227ENST00000458564 MAGEC1O60732 1142 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 MOCS2O96007 188 aaPredicted RBP10.76□□□□□ -0.69
HDLBP-227ENST00000458564 IL1BP01584 269 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 CKMT2P17540 419 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 TACR2P21452 398 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 ACP1P24666 158 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 ITPKBP27987 946 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 NNMTP40261 264 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 STK19P49842 368 aaPredicted RBP10.76□□□□□ -0.69
HDLBP-227ENST00000458564 PLK1P53350 603 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 OXCT1P55809 520 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 CLDN6P56747 220 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 CETN1Q12798 172 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 SYPL2Q5VXT5 272 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 RAP1GAP2Q684P5 730 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 FOXR2Q6PJQ5 311 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 DSG4Q86SJ6 1040 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 TRIM69Q86WT6 500 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 CHSY1Q86X52 802 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 SPATS2Q86XZ4 545 aaKnown RBP10.76□□□□□ -0.69
HDLBP-227ENST00000458564 LGI2Q8N0V4 545 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 BAP1Q92560 729 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 RPL10LQ96L21 214 aaKnown RBP10.76□□□□□ -0.69
HDLBP-227ENST00000458564 PRMT1Q99873 361 aaKnown RBP10.76□□□□□ -0.69
HDLBP-227ENST00000458564 SLC4A5Q9BY07 1137 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 POPDC2Q9HBU9 364 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 CYTH4Q9UIA0 394 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 CEP83Q9Y592 693 aa10.76□□□□□ -0.69
HDLBP-227ENST00000458564 TBC1D3DA0A087WVF3 549 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 TBC1D3IA0A087WXS9 549 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 TBC1D3EA0A087X179 549 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 TBC1D3KA0A087X1G2 549 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 TBC1D3FA6NER0 549 aaPredicted RBP10.75□□□□□ -0.69
HDLBP-227ENST00000458564 KCNU1A8MYU2 1149 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 TBC1D3LB9A6J9 549 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 F5H5T6 163 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 PSMA7O14818 248 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 ALOX15BO15296 676 aa10.75□□□□□ -0.69
HDLBP-227ENST00000458564 ATP9BO43861 1147 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms