RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 ANKS1BQ7Z6G8 1248 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 CPNE8Q86YQ8 564 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 PSTKQ8IV42 348 aaKnown RBP10.35□□□□□ -0.75
ATG4A-206ENST00000457035 C1orf210Q8IVY1 113 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 LRRC8AQ8IWT6 810 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 MAML2Q8IZL2 1156 aaPredicted RBP10.35□□□□□ -0.75
ATG4A-206ENST00000457035 ZNF557Q8N988 423 aaPredicted RBP10.35□□□□□ -0.75
ATG4A-206ENST00000457035 IL17RCQ8NAC3 791 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 OR52K2Q8NGK3 314 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 RPLP0P6Q8NHW5 317 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 CCDC26Q8TAB7 109 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 RFFLQ8WZ73 363 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 TTC17Q96AE7 1141 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 ALG14Q96F25 216 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 RETREG1Q9H6L5 497 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 POLR3BQ9NW08 1133 aaPredicted RBP10.35□□□□□ -0.75
ATG4A-206ENST00000457035 GPATCH2LQ9NWQ4 482 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 KIAA1522Q9P206 1035 aaPredicted RBP10.35□□□□□ -0.75
ATG4A-206ENST00000457035 RABGEF1Q9UJ41 708 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 GGA2Q9UJY4 613 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 NEU3Q9UQ49 428 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 OR51B4Q9Y5P0 310 aa10.35□□□□□ -0.75
ATG4A-206ENST00000457035 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.34□□□□□ -0.75
ATG4A-206ENST00000457035 PRR23AA6NEV1 266 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 PJA2O43164 708 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 MAP3K7O43318 606 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 ADAM23O75077 832 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 ATG13O75143 517 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 MZF1P28698 734 aaPredicted RBP10.34□□□□□ -0.75
ATG4A-206ENST00000457035 HOXC13P31276 330 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 NBL1P41271 181 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 CXCL12P48061 93 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 HADHBP55084 474 aaKnown RBP10.34□□□□□ -0.75
ATG4A-206ENST00000457035 SLC25A11Q02978 314 aaKnown RBP10.34□□□□□ -0.75
ATG4A-206ENST00000457035 ZNF177Q13360 481 aaPredicted RBP10.34□□□□□ -0.75
ATG4A-206ENST00000457035 SLC12A1Q13621 1099 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 CDH18Q13634 790 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 ENPP2Q13822 863 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 MESDQ14696 234 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 EIF4HQ15056 248 aaKnown RBP10.34□□□□□ -0.75
ATG4A-206ENST00000457035 PROX2Q3B8N5 592 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 HSF5Q4G112 596 aaPredicted RBP10.34□□□□□ -0.75
ATG4A-206ENST00000457035 EGFLAMQ63HQ2 1017 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 MBLAC2Q68D91 279 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 TXNRD3NBQ6F5E7 133 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 NLRP14Q86W24 1093 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 APCDD1Q8J025 514 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 CCDC33Q8N5R6 958 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 ZNF513Q8N8E2 541 aaPredicted RBP10.34□□□□□ -0.75
ATG4A-206ENST00000457035 ACRBPQ8NEB7 543 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 WFIKKN2Q8TEU8 576 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 SORCS1Q8WY21 1168 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 ACOX2Q99424 681 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 FEM1AQ9BSK4 669 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 SNRNP25Q9BV90 132 aaKnown RBP10.34□□□□□ -0.75
ATG4A-206ENST00000457035 ZYG11BQ9C0D3 744 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 LACRTQ9GZZ8 138 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 DHX35Q9H5Z1 703 aaKnown RBP10.34□□□□□ -0.75
ATG4A-206ENST00000457035 ZDHHC4Q9NPG8 344 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 NDFIP2Q9NV92 336 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 SPATA6Q9NWH7 488 aaPredicted RBP10.34□□□□□ -0.75
ATG4A-206ENST00000457035 THAP10Q9P2Z0 257 aaPredicted RBP10.34□□□□□ -0.75
ATG4A-206ENST00000457035 LCMT1Q9UIC8 334 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 SALL4Q9UJQ4 1053 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 AP4E1Q9UPM8 1137 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 DUSP10Q9Y6W6 482 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 NUMA1Q14980 2115 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 CFAP54Q96N23 3096 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 VPS13AQ96RL7 3174 aa10.34□□□□□ -0.75
ATG4A-206ENST00000457035 A0A0A6YYK5 440 aaPredicted RBP10.33□□□□□ -0.76
ATG4A-206ENST00000457035 BTNL10A8MVZ5 291 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 WASH3PC4AMC7 463 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 PROB1E7EW31 1015 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 SGK1O00141 431 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 CREB3O43889 395 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 PAPSS2O95340 614 aaPredicted RBP10.33□□□□□ -0.76
ATG4A-206ENST00000457035 RARAP10276 462 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 RHOQP17081 205 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 OR1E1P30953 314 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 MAN1A1P33908 653 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 CSKP41240 450 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 VAV2P52735 878 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 OXCT1P55809 520 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 TAS2R40P59535 323 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 KRT83P78385 493 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 SATB1Q01826 763 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 DMC1Q14565 340 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 PTPRNQ16849 979 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 PLEKHG6Q3KR16 790 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 FUT11Q495W5 492 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 ATP13A4Q4VNC1 1196 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 KCNT1Q5JUK3 1230 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 SYT13Q7L8C5 426 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 SETD3Q86TU7 594 aaPredicted RBP10.33□□□□□ -0.76
ATG4A-206ENST00000457035 CCDC117Q8IWD4 279 aaPredicted RBP10.33□□□□□ -0.76
ATG4A-206ENST00000457035 AHI1Q8N157 1196 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 ALLCQ8N6M5 410 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 TXNDC5Q8NBS9 432 aaKnown RBP10.33□□□□□ -0.76
ATG4A-206ENST00000457035 UCMAQ8WVF2 138 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 TEKT4Q8WW24 435 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms