RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	DGKA	P23743	735 aa		13.63	□□□□□ -0.23
SNHG17-208	ENST00000456953	MZF1	P28698	734 aa	Predicted RBP	13.63	□□□□□ -0.23
SNHG17-208	ENST00000456953	ELAVL3	Q14576	367 aa	Known RBP	13.63	□□□□□ -0.23
SNHG17-208	ENST00000456953	FAM133B	Q5BKY9	247 aa	Known RBP	13.63	□□□□□ -0.23
SNHG17-208	ENST00000456953	KIAA1614	Q5VZ46	1190 aa		13.63	□□□□□ -0.23
SNHG17-208	ENST00000456953	BSPRY	Q5W0U4	402 aa		13.63	□□□□□ -0.23
SNHG17-208	ENST00000456953	NUGGC	Q68CJ6	796 aa		13.63	□□□□□ -0.23
SNHG17-208	ENST00000456953	ARHGAP17	Q68EM7	881 aa		13.63	□□□□□ -0.23
SNHG17-208	ENST00000456953	UNC45B	Q8IWX7	931 aa		13.63	□□□□□ -0.23
SNHG17-208	ENST00000456953	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.63	□□□□□ -0.23
SNHG17-208	ENST00000456953	HJURP	Q8NCD3	748 aa	Predicted RBP	13.63	□□□□□ -0.23
SNHG17-208	ENST00000456953	CCDC150	Q8NCX0	1101 aa		13.63	□□□□□ -0.23
SNHG17-208	ENST00000456953	TAS1R2	Q8TE23	839 aa		13.63	□□□□□ -0.23
SNHG17-208	ENST00000456953	NDRG1	Q92597	394 aa	Known RBP	13.63	□□□□□ -0.23
SNHG17-208	ENST00000456953	FAM117A	Q9C073	453 aa		13.63	□□□□□ -0.23
SNHG17-208	ENST00000456953	BLZF1	Q9H2G9	400 aa		13.63	□□□□□ -0.23
SNHG17-208	ENST00000456953	STIM2	Q9P246	746 aa		13.63	□□□□□ -0.23
SNHG17-208	ENST00000456953	SERTAD1	Q9UHV2	236 aa		13.63	□□□□□ -0.23
SNHG17-208	ENST00000456953	FRMD4B	Q9Y2L6	1034 aa		13.63	□□□□□ -0.23
SNHG17-208	ENST00000456953	HEMK1	Q9Y5R4	338 aa	Predicted RBP	13.63	□□□□□ -0.23
SNHG17-208	ENST00000456953	BSN	Q9UPA5	3926 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	TYW5	A2RUC4	315 aa	Known RBP	13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	PRAMEF26	H0Y7S4	382 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	SLC7A4	O43246	635 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	IL1B	P01584	269 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	IGLV3-27	P01718	113 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	CASP1	P29466	404 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	RBMS1	P29558	406 aa	Known RBP	13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	MAT2A	P31153	395 aa	Known RBP	13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	SLC6A4	P31645	630 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	DRD3	P35462	400 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	SKOR1	P84550	965 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	ECT2L	Q008S8	904 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	CDH18	Q13634	790 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	PITRM1	Q5JRX3	1037 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	TMC6	Q7Z403	805 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	TRIM69	Q86WT6	500 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	STK40	Q8N2I9	435 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	SLC4A11	Q8NBS3	891 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	AZIN2	Q96A70	460 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	FAM131C	Q96AQ9	280 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	GRAMD1A	Q96CP6	724 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	FAXDC2	Q96IV6	333 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	ABCG4	Q9H172	646 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	USP29	Q9HBJ7	922 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	LRRC4	Q9HBW1	653 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	ABCC13	Q9NSE7	274 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	EVA1B	Q9NVM1	165 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	KLHL11	Q9NVR0	708 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	TJP2	Q9UDY2	1190 aa		13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	HOOK1	Q9UJC3	728 aa	Known RBP	13.62	□□□□□ -0.23
SNHG17-208	ENST00000456953	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	AHCTF1	Q8WYP5	2266 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	GOLGA6L7	A0A1B0GV03	622 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	YJEFN3	A6XGL0	299 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953		E7ENQ6	273 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	PDXK	O00764	312 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	XPO1	O14980	1071 aa	Known RBP	13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	FFAR2	O15552	330 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	ACTN4	O43707	911 aa	Known RBP	13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	ACSL4	O60488	711 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	MOCS3	O95396	460 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	NTRK1	P04629	796 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	ALPPL2	P10696	532 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	KRT10	P13645	584 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	CTSO	P43234	321 aa	Predicted RBP	13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	GCLM	P48507	274 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	DUSP3	P51452	185 aa	Predicted RBP	13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	VAMP7	P51809	220 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	RAD23B	P54727	409 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	ADIG	Q0VDE8	80 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	NFATC3	Q12968	1075 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	NFKBIB	Q15653	356 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	ISX	Q2M1V0	245 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	SETMAR	Q53H47	684 aa	Predicted RBP	13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	RNF219	Q5W0B1	726 aa	Predicted RBP	13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	CEP135	Q66GS9	1140 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	MSANTD2	Q6P1R3	559 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	CCDC81	Q6ZN84	652 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	KRBA2	Q6ZNG9	492 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	SIX6OS1	Q8N1H7	587 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	CARNMT1	Q8N4J0	409 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	KLHDC7B	Q96G42	594 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	SLC46A1	Q96NT5	459 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	DDX50	Q9BQ39	737 aa	Known RBP	13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	KCTD10	Q9H3F6	313 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	CISH	Q9NSE2	258 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	UCKL1	Q9NWZ5	548 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	SLCO3A1	Q9UIG8	710 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	CEP83	Q9Y592	693 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	DOPEY2	Q9Y3R5	2298 aa		13.61	□□□□□ -0.23
SNHG17-208	ENST00000456953	MYO9A	B2RTY4	2548 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	TULP2	O00295	520 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	MAPK13	O15264	365 aa		13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	PLRG1	O43660	514 aa	Known RBP	13.6	□□□□□ -0.23
SNHG17-208	ENST00000456953	RNGTT	O60942	597 aa	Known RBP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms