RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 NSMCE3Q96MG7 304 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 CNPY3Q9BT09 278 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 KCND2Q9NZV8 630 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 POMPQ9Y244 141 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 GMPPBQ9Y5P6 360 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 ERI2A8K979 691 aaKnown RBP12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 CYP7B1O75881 506 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 PRKD3O94806 890 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 C15orf59Q2T9L4 293 aaPredicted RBP12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 CBWD6Q4V339 395 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 DCAF6Q58WW2 860 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 CBWD3Q5JTY5 395 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 CBWD5Q5RIA9 395 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 PLET1Q6UQ28 207 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 RASGEF1CQ8N431 466 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 COLGALT1Q8NBJ5 622 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 PDPRQ8NCN5 879 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 SPPL2AQ8TCT8 520 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 GANQ9H2C0 597 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 RAVER2Q9HCJ3 691 aaKnown RBP12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 NR2E1Q9Y466 385 aa12.57□□□□□ -0.4
NEDD4L-208ENST00000456173 ARIH2O95376 493 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 BMP10O95393 424 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 CALCAP01258 141 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 RBP1P09455 135 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 ERVK-10P10266 1014 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 AZGP1P25311 298 aaKnown RBP12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 BCAP31P51572 246 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 EPS8Q12929 822 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 TEKT5Q96M29 485 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 TBCCD1Q9NVR7 557 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 MTMR4Q9NYA4 1195 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 C3orf18Q9UK00 162 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 SNX9Q9Y5X1 595 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 FARP2O94887 1054 aaPredicted RBP12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 FADS2O95864 444 aaKnown RBP12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 RRM2P31350 389 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 CRADDP78560 199 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 POU5F1Q01860 360 aaKnown RBP12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 GRTP1Q5TC63 336 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 LRRC55Q6ZSA7 311 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 C10orf107Q8IVU9 208 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 DSELQ8IZU8 1212 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 KAT5Q92993 513 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 FAM84BQ96KN1 310 aaPredicted RBP12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 MID1IP1Q9NPA3 183 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 TCRBV7S2A1N4TA0A589 114 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 ZNF197O14709 1029 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 TRDMT1O14717 391 aaKnown RBP12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 BIRC5O15392 142 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 NR6A1Q15406 480 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 FAM182BQ5T319 152 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 VWA5B1Q5TIE3 1220 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 PKN3Q6P5Z2 889 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 ISCA1Q9BUE6 129 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 COQ10BQ9H8M1 238 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 PCDHA10Q9Y5I2 948 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 TYW5A2RUC4 315 aaKnown RBP12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 FAM86B1E9PN63 330 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 LIASO43766 372 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 AVILO75366 819 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 CPSF4O95639 269 aaKnown RBP12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 ITGA1P56199 1179 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 CACNB2Q08289 660 aaPredicted RBP12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 TSNQ15631 228 aaKnown RBP12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 FAAH2Q6GMR7 532 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 POTEHQ6S545 545 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 VSTM1Q6UX27 236 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 UBE2J2Q8N2K1 259 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 FAM156AQ8NDB6 213 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 VPS37AQ8NEZ2 397 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 C10orf82Q8WW14 230 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 BHMTQ93088 406 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 KIF12Q96FN5 646 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 TPD52L3Q96J77 140 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 TMEM109Q9BVC6 243 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 KATNAL1Q9BW62 490 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 FAM49AQ9H0Q0 323 aaPredicted RBP12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 POMKQ9H5K3 350 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 GPRC5CQ9NQ84 441 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 TOR4AQ9NXH8 423 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 TMCC3Q9ULS5 477 aa12.56□□□□□ -0.4
NEDD4L-208ENST00000456173 RPTORQ8N122 1335 aa12.55□□□□□ -0.4
NEDD4L-208ENST00000456173 ERVV-1B6SEH8 477 aa12.55□□□□□ -0.4
NEDD4L-208ENST00000456173 ANKRD63C9JTQ0 380 aa12.55□□□□□ -0.4
NEDD4L-208ENST00000456173 F8W810 466 aa12.55□□□□□ -0.4
NEDD4L-208ENST00000456173 HAT1O14929 419 aa12.55□□□□□ -0.4
NEDD4L-208ENST00000456173 HDAC3O15379 428 aa12.55□□□□□ -0.4
NEDD4L-208ENST00000456173 RECQL5O94762 991 aaPredicted RBP12.55□□□□□ -0.4
NEDD4L-208ENST00000456173 CNPP09543 421 aaKnown RBP12.55□□□□□ -0.4
NEDD4L-208ENST00000456173 CYP4B1P13584 511 aa12.55□□□□□ -0.4
NEDD4L-208ENST00000456173 DNASE1L3Q13609 305 aa12.55□□□□□ -0.4
NEDD4L-208ENST00000456173 NIPAL1Q6NVV3 410 aa12.55□□□□□ -0.4
NEDD4L-208ENST00000456173 ZNF544Q6NX49 715 aa12.55□□□□□ -0.4
NEDD4L-208ENST00000456173 CATSPER4Q7RTX7 472 aa12.55□□□□□ -0.4
NEDD4L-208ENST00000456173 IRF2BP2Q7Z5L9 587 aa12.55□□□□□ -0.4
NEDD4L-208ENST00000456173 SCN4BQ8IWT1 228 aa12.55□□□□□ -0.4
NEDD4L-208ENST00000456173 ADHFE1Q8IWW8 467 aa12.55□□□□□ -0.4
NEDD4L-208ENST00000456173 OR8H3Q8N146 312 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms