RNA–Protein interactions for RNA: ENST00000455313.6

PDXDC1-204, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-204ENST00000455313 PRO3102Q9H379 93 aa17.16■□□□□ 0.34
PDXDC1-204ENST00000455313 PAK5Q9P286 719 aa17.16■□□□□ 0.34
PDXDC1-204ENST00000455313 MTRF1LQ9UGC7 380 aaKnown RBP17.16■□□□□ 0.34
PDXDC1-204ENST00000455313 TPX2Q9ULW0 747 aaKnown RBP17.16■□□□□ 0.34
PDXDC1-204ENST00000455313 TRIOBPQ9H2D6 2365 aa17.16■□□□□ 0.34
PDXDC1-204ENST00000455313 C5orf60A6NFR6 353 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 KCNK1O00180 336 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 RNF103O00237 685 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 TRDMT1O14717 391 aaKnown RBP17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 GCATO75600 419 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 DDX6P26196 483 aaKnown RBP eCLIP17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 ARHGAP15Q53QZ3 475 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 RNASEH2BQ5TBB1 312 aaKnown RBP17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 TMC5Q6UXY8 1006 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 ATPAF2Q8N5M1 289 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 SMG7Q92540 1137 aaKnown RBP17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 CDCA3Q99618 268 aaPredicted RBP17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 FERMT1Q9BQL6 677 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 DONSONQ9NYP3 566 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 CFAP97Q9P2B7 532 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 FARP1Q9Y4F1 1045 aaPredicted RBP17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 ZFP37Q9Y6Q3 630 aaPredicted RBP17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 A0A0A0MRY4 1105 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 AVPR1AP37288 418 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 SGSHP51688 502 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 RPS24P62847 133 aaKnown RBP17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 BASP1P80723 227 aaKnown RBP17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 CAV1Q03135 178 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 WASHC5Q12768 1159 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 RABGAP1LQ5R372 815 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 ARHGAP36Q6ZRI8 547 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 CMTM8Q8IZV2 173 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 CPT1BQ92523 772 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 PPP2R3CQ969Q6 453 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 SPATA13Q96N96 652 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 CEP41Q9BYV8 373 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 TASP1Q9H6P5 420 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 SFXN1Q9H9B4 322 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 PIDD1Q9HB75 910 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 SEPT10Q9P0V9 454 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 LSM7Q9UK45 103 aaKnown RBP17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 ARHGAP26Q9UNA1 814 aa17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 PRRC2BQ5JSZ5 2229 aaKnown RBP17.15■□□□□ 0.34
PDXDC1-204ENST00000455313 CHD5Q8TDI0 1954 aa17.14■□□□□ 0.33
PDXDC1-204ENST00000455313 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.14■□□□□ 0.33
PDXDC1-204ENST00000455313 NDST2P52849 883 aa17.14■□□□□ 0.33
PDXDC1-204ENST00000455313 MORF4L2Q15014 288 aa17.14■□□□□ 0.33
PDXDC1-204ENST00000455313 TMC3Q7Z5M5 1100 aa17.14■□□□□ 0.33
PDXDC1-204ENST00000455313 DDX50Q9BQ39 737 aaKnown RBP17.14■□□□□ 0.33
PDXDC1-204ENST00000455313 SHOC2Q9UQ13 582 aa17.14■□□□□ 0.33
PDXDC1-204ENST00000455313 CCL26Q9Y258 94 aa17.14■□□□□ 0.33
PDXDC1-204ENST00000455313 LEFTY2O00292 366 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 ZNF189O75820 626 aaPredicted RBP17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 STK10O94804 968 aaKnown RBP17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 PAPLNO95428 1278 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 OR1E1P30953 314 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 MAPKAPK2P49137 400 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 ZNF33AQ06730 810 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 ANKRD20A2Q5SQ80 823 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 ANKRD20A1Q5TYW2 823 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 ANKRD20A3Q5VUR7 823 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 CCDC13Q8IYE1 715 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 ZBTB9Q96C00 473 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 TSGA13Q96PP4 275 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 IGFLR1Q9H665 355 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 RAB6BQ9NRW1 208 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 SH3BP1Q9Y3L3 701 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 TSPAN3O60637 253 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 MAFKO60675 156 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 GLP2RO95838 553 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 CEBPBP17676 345 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 CHKAP35790 457 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 PAPOLAP51003 745 aaKnown RBP17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 FAXCQ5TGI0 409 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 ANKRD22Q5VYY1 191 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 ARHGEF18Q6ZSZ5 1173 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 HTR3DQ70Z44 454 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 PCGF5Q86SE9 256 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 PPIL6Q8IXY8 311 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 ZNF567Q8N184 647 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 ING5Q8WYH8 240 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 PRCCQ92733 491 aaPredicted RBP17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 HMCESQ96FZ2 354 aa17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 MRPS23Q9Y3D9 190 aaKnown RBP17.13■□□□□ 0.33
PDXDC1-204ENST00000455313 ZNF197O14709 1029 aa17.12■□□□□ 0.33
PDXDC1-204ENST00000455313 NDC80O14777 642 aa17.12■□□□□ 0.33
PDXDC1-204ENST00000455313 MTSS1O43312 755 aa17.12■□□□□ 0.33
PDXDC1-204ENST00000455313 OPHN1O60890 802 aa17.12■□□□□ 0.33
PDXDC1-204ENST00000455313 RAMP2O60895 175 aa17.12■□□□□ 0.33
PDXDC1-204ENST00000455313 PRAMEF12O95522 483 aa17.12■□□□□ 0.33
PDXDC1-204ENST00000455313 METTL18O95568 372 aa17.12■□□□□ 0.33
PDXDC1-204ENST00000455313 PTPN3P26045 913 aa17.12■□□□□ 0.33
PDXDC1-204ENST00000455313 HSPA9P38646 679 aaKnown RBP17.12■□□□□ 0.33
PDXDC1-204ENST00000455313 CDH4P55283 916 aa17.12■□□□□ 0.33
PDXDC1-204ENST00000455313 DHX9Q08211 1270 aaKnown RBP17.12■□□□□ 0.33
PDXDC1-204ENST00000455313 ZBTB17Q13105 803 aa17.12■□□□□ 0.33
PDXDC1-204ENST00000455313 C4orf22Q6V702 233 aa17.12■□□□□ 0.33
PDXDC1-204ENST00000455313 FAM217AQ8IXS0 508 aa17.12■□□□□ 0.33
PDXDC1-204ENST00000455313 MREGQ8N565 214 aa17.12■□□□□ 0.33
PDXDC1-204ENST00000455313 NAT8LQ8N9F0 302 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms