RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 SNX10Q9Y5X0 201 aa6.2□□□□□ -1.42
HLA-DPA3-207ENST00000454398 RP1P56715 2156 aa6.2□□□□□ -1.42
HLA-DPA3-207ENST00000454398 NBASA2RRP1 2371 aa6.2□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TBC1D3DA0A087WVF3 549 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TBC1D3IA0A087WXS9 549 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TBC1D3EA0A087X179 549 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TBC1D3KA0A087X1G2 549 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 EDDM13A0A1B0GTR0 161 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 A0A1W2PNU3 283 aaPredicted RBP6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TYW5A2RUC4 315 aaKnown RBP6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TBC1D3FA6NER0 549 aaPredicted RBP6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 LRRC72A6NJI9 287 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TBC1D3LB9A6J9 549 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 AGRPO00253 132 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ATXN7O15265 892 aaPredicted RBP6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TIMM44O43615 452 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SIGLEC6O43699 453 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 GRAP2O75791 330 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 NEBLO76041 1014 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TBC1D3HP0C7X1 549 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 GLDCP23378 1020 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CMA1P23946 247 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 RPL13P26373 211 aaKnown RBP6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 GTF2H1P32780 548 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PRCPP42785 496 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CLDN2P57739 230 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ZBTB16Q05516 673 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CNTN1Q12860 1018 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 DRAP1Q14919 205 aaPredicted RBP6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 NFIL3Q16649 462 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 MS4A13Q5J8X5 152 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ARTNQ5T4W7 220 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 AGBL4Q5VU57 503 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 RNF219Q5W0B1 726 aaPredicted RBP6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 NUGGCQ68CJ6 796 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TBC1D3GQ6DHY5 549 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 OR6B2Q6IFH4 312 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TBC1D3CQ6IPX1 549 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 NAPEPLDQ6IQ20 393 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CXorf57Q6NSI4 855 aaKnown RBP6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 USP30Q70CQ3 517 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TMPRSS12Q86WS5 348 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PASD1Q8IV76 773 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TBC1D3Q8IZP1 549 aaPredicted RBP6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TSC1Q92574 1164 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 GOLGA1Q92805 767 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 FAM129BQ96TA1 746 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 LGMNQ99538 433 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 FAM204AQ9H8W3 233 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 FBRSQ9HAH7 460 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 OSGEPQ9NPF4 335 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CNGB3Q9NQW8 809 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ABCC13Q9NSE7 274 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 WDR70Q9NW82 654 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CYTH4Q9UIA0 394 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 NCKAP1Q9Y2A7 1128 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 LRRK2Q5S007 2527 aa6.19□□□□□ -1.42
HLA-DPA3-207ENST00000454398 DOPEY2Q9Y3R5 2298 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 A0A1B0GVM2 712 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 E5RJQ4 531 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 K7ERQ8 282 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TLR4O00206 839 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CETN3O15182 167 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SLC16A3O15427 465 aaKnown RBP6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SLC31A1O15431 190 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 IRAK2O43187 625 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PAPSS1O43252 624 aaPredicted RBP6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 LATO43561 262 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SNAP91O60641 907 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 RNASEH1O60930 286 aaKnown RBP6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ENDOD1O94919 500 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 LATS1O95835 1130 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ADH1BP00325 375 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ASLP04424 464 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CTSLP07711 333 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PNMA6AP0CW24 399 aaPredicted RBP6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 VDRP11473 427 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 KRT5P13647 590 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 GOT1P17174 413 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TACR2P21452 398 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 FMO5P49326 533 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ARRB1P49407 418 aaPredicted RBP6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TAS2R38P59533 333 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ZNF445P59923 1031 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 GABREP78334 506 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 KRT85P78386 507 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 DAB2P98082 770 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ECT2LQ008S8 904 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 LY6DQ14210 128 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ELAVL3Q14576 367 aaKnown RBP6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 EDRF1Q3B7T1 1238 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PROX2Q3B8N5 592 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TBC1D25Q3MII6 688 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ARHGAP40Q5TG30 622 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SEL1L3Q68CR1 1132 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ANKRD40Q6AI12 368 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 KLHL10Q6JEL2 608 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 GJB7Q6PEY0 223 aa6.18□□□□□ -1.42
HLA-DPA3-207ENST00000454398 LCLAT1Q6UWP7 414 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms