RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 ITGAVP06756 1048 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 PDGFRAP16234 1089 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 MZF1P28698 734 aaPredicted RBP12.06□□□□□ -0.48
GARNL3-210ENST00000453030 CD38P28907 300 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 ACADSBP45954 432 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 METAP1P53582 386 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 STX17P56962 302 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 NUCB2P80303 420 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 KCNH2Q12809 1159 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 DNAJC3Q13217 504 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 CAMK2BQ13554 666 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 ARID5BQ14865 1188 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 SND1Q7KZF4 910 aaKnown RBP eCLIP12.06□□□□□ -0.48
GARNL3-210ENST00000453030 KDM1BQ8NB78 822 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 SKA1Q96BD8 255 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 CRELD1Q96HD1 420 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 SERAC1Q96JX3 654 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 CNDP2Q96KP4 475 aaKnown RBP12.06□□□□□ -0.48
GARNL3-210ENST00000453030 BTN2A3PQ96KV6 586 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 DCBLD2Q96PD2 775 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 FAM129BQ96TA1 746 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 TRIM62Q9BVG3 475 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 GTPBP4Q9BZE4 634 aaKnown RBP12.06□□□□□ -0.48
GARNL3-210ENST00000453030 FAM204AQ9H8W3 233 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 POPDC2Q9HBU9 364 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 ACP6Q9NPH0 428 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 GDF3Q9NR23 364 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 COX16Q9P0S2 106 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 ADAMTS1Q9UHI8 967 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 CYTH4Q9UIA0 394 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 DOCK4Q8N1I0 1966 aa12.06□□□□□ -0.48
GARNL3-210ENST00000453030 TRPM6Q9BX84 2022 aa12.05□□□□□ -0.48
GARNL3-210ENST00000453030 A0A1W2PR77 199 aa12.05□□□□□ -0.48
GARNL3-210ENST00000453030 BIN1O00499 593 aa12.05□□□□□ -0.48
GARNL3-210ENST00000453030 TRUB2O95900 331 aaKnown RBP12.05□□□□□ -0.48
GARNL3-210ENST00000453030 AFPP02771 609 aaKnown RBP12.05□□□□□ -0.48
GARNL3-210ENST00000453030 GOT1P17174 413 aa12.05□□□□□ -0.48
GARNL3-210ENST00000453030 C5AR1P21730 350 aa12.05□□□□□ -0.48
GARNL3-210ENST00000453030 EPHA8P29322 1005 aaPredicted RBP12.05□□□□□ -0.48
GARNL3-210ENST00000453030 GNA15P30679 374 aa12.05□□□□□ -0.48
GARNL3-210ENST00000453030 MAT2AP31153 395 aaKnown RBP12.05□□□□□ -0.48
GARNL3-210ENST00000453030 GGCXP38435 758 aa12.05□□□□□ -0.48
GARNL3-210ENST00000453030 PPP1R2P41236 205 aa12.05□□□□□ -0.48
GARNL3-210ENST00000453030 RPL34P49207 117 aaKnown RBP12.05□□□□□ -0.48
GARNL3-210ENST00000453030 CENPCQ03188 943 aa12.05□□□□□ -0.48
GARNL3-210ENST00000453030 PDCLQ13371 301 aa12.05□□□□□ -0.48
GARNL3-210ENST00000453030 ELAVL3Q14576 367 aaKnown RBP12.05□□□□□ -0.48
GARNL3-210ENST00000453030 SHBQ15464 509 aa12.05□□□□□ -0.48
GARNL3-210ENST00000453030 TAF5Q15542 800 aa12.05□□□□□ -0.48
GARNL3-210ENST00000453030 POM121L1PQ3SYA9 428 aa12.05□□□□□ -0.48
GARNL3-210ENST00000453030 SOWAHCQ53LP3 525 aaPredicted RBP12.05□□□□□ -0.48
GARNL3-210ENST00000453030 TRIM59Q8IWR1 403 aa12.05□□□□□ -0.48
GARNL3-210ENST00000453030 CCAR2Q8N163 923 aaKnown RBP12.05□□□□□ -0.48
GARNL3-210ENST00000453030 EID2Q8N6I1 236 aa12.05□□□□□ -0.48
GARNL3-210ENST00000453030 PDCD7Q8N8D1 485 aaKnown RBP12.05□□□□□ -0.48
GARNL3-210ENST00000453030 EHBP1Q8NDI1 1231 aa12.05□□□□□ -0.48
GARNL3-210ENST00000453030 PTPRN2Q92932 1015 aa12.05□□□□□ -0.48
GARNL3-210ENST00000453030 TIGD1Q96MW7 591 aa12.05□□□□□ -0.48
GARNL3-210ENST00000453030 UBE2TQ9NPD8 197 aaPredicted RBP12.05□□□□□ -0.48
GARNL3-210ENST00000453030 SCUBE2Q9NQ36 999 aa12.05□□□□□ -0.48
GARNL3-210ENST00000453030 DKK4Q9UBT3 224 aa12.05□□□□□ -0.48
GARNL3-210ENST00000453030 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.05□□□□□ -0.48
GARNL3-210ENST00000453030 TBC1D3DA0A087WVF3 549 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 TBC1D3IA0A087WXS9 549 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 TBC1D3EA0A087X179 549 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 TBC1D3KA0A087X1G2 549 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 A0A1B0GVM2 712 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 BICDL2A1A5D9 508 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 TBC1D3FA6NER0 549 aaPredicted RBP12.04□□□□□ -0.48
GARNL3-210ENST00000453030 TCAF2A6NFQ2 919 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 PPP1R3GB7ZBB8 358 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 TBC1D3LB9A6J9 549 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 MED7O43513 233 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 RFPL3O75679 317 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 LDOC1O95751 146 aaPredicted RBP12.04□□□□□ -0.48
GARNL3-210ENST00000453030 IGLV3-25P01717 112 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 TBC1D3HP0C7X1 549 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 BMP6P22004 513 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 DRD3P35462 400 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 HNF1BP35680 557 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 NNMTP40261 264 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 ARRB1P49407 418 aaPredicted RBP12.04□□□□□ -0.48
GARNL3-210ENST00000453030 CCR5P51681 352 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 NXPH1P58417 271 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 TBC1D3GQ6DHY5 549 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 TBC1D3CQ6IPX1 549 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 GJB7Q6PEY0 223 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.04□□□□□ -0.48
GARNL3-210ENST00000453030 PASD1Q8IV76 773 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 TBC1D3Q8IZP1 549 aaPredicted RBP12.04□□□□□ -0.48
GARNL3-210ENST00000453030 ATP6V0D2Q8N8Y2 350 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 SAP25Q8TEE9 199 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 RNF34Q969K3 372 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 NXPE2Q96DL1 559 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 BBC3Q96PG8 261 aaPredicted RBP12.04□□□□□ -0.48
GARNL3-210ENST00000453030 SLC4A5Q9BY07 1137 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 DDIT4Q9NX09 232 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 KALRNO60229 2985 aa12.04□□□□□ -0.48
GARNL3-210ENST00000453030 KCNU1A8MYU2 1149 aa12.03□□□□□ -0.48
GARNL3-210ENST00000453030 TLR4O00206 839 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms