RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 BYSLQ13895 437 aaKnown RBP16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 STARD3Q14849 445 aa16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 FNDC3BQ53EP0 1204 aaKnown RBP16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 FAM72AQ5TYM5 149 aa16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 FAM72DQ6L9T8 149 aa16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 PPP1R2P3Q6NXS1 205 aa16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 FAM72BQ86X60 149 aa16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 ZNF366Q8N895 744 aa16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 FAM172AQ8WUF8 416 aa16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 NTAN1Q96AB6 310 aa16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 FAM129BQ96TA1 746 aa16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 CNPY3Q9BT09 278 aa16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 SELENOOQ9BVL4 669 aa16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 PRDM16Q9HAZ2 1276 aa16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 SEPT11Q9NVA2 429 aaKnown RBP16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 MPP6Q9NZW5 540 aa16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 BCCIPQ9P287 314 aaKnown RBP eCLIP16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 SUN2Q9UH99 717 aa16.58■□□□□ 0.24
SCAMP4-205ENST00000452128 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 TTC34A8MYJ7 566 aa16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 CCP110O43303 1012 aa16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 SYNCRIPO60506 623 aaKnown RBP16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 RTN2O75298 545 aa16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 PLEKP08567 350 aaPredicted RBP16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 PTGER3P43115 390 aa16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 TPMTP51580 245 aa16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 RPS14P62263 151 aaKnown RBP16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 ZNF252P-AS1Q0IIN9 211 aa16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 ZNF177Q13360 481 aaPredicted RBP16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 ELF2Q15723 593 aa16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 PEAR1Q5VY43 1037 aaPredicted RBP16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 DNAJC24Q6P3W2 148 aa16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 NLRP14Q86W24 1093 aa16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 PGBD3Q8N328 593 aa16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 CCDC185Q8N715 623 aa16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 PTPRN2Q92932 1015 aa16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 ZNF419Q96HQ0 510 aaPredicted RBP16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 TRIM7Q9C029 511 aa16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 RSPH9Q9H1X1 276 aaPredicted RBP16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 WSB2Q9NYS7 404 aaPredicted RBP16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 BZW2Q9Y6E2 419 aaKnown RBP16.57■□□□□ 0.24
SCAMP4-205ENST00000452128 CACNA1AO00555 2505 aa16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 ATP9BO43861 1147 aa16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 ZMPSTE24O75844 475 aa16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 SERPING1P05155 500 aa16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 STK19P49842 368 aaPredicted RBP16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 SEMA3BQ13214 749 aa16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 CDO1Q16878 200 aa16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 ASTE1Q2TB18 679 aaPredicted RBP16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 SLC36A4Q6YBV0 504 aa16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 CYP4V2Q6ZWL3 525 aaPredicted RBP16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 SETD3Q86TU7 594 aaPredicted RBP16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 SLC41A1Q8IVJ1 513 aa16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 DRC7Q8IY82 874 aa16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 TMEFF1Q8IYR6 380 aa16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 SIPA1Q96FS4 1042 aa16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 MCEEQ96PE7 176 aa16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 RETREG1Q9H6L5 497 aa16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 FBRSQ9HAH7 460 aa16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 TMEM74BQ9NUR3 256 aa16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 PARVAQ9NVD7 372 aa16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 DLL3Q9NYJ7 618 aa16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 ARHGAP20Q9P2F6 1191 aa16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 OR12D3Q9UGF7 316 aa16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 ADAMTS1Q9UHI8 967 aa16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 LUC7L2Q9Y383 392 aaKnown RBP16.56■□□□□ 0.24
SCAMP4-205ENST00000452128 A0A0D9SEW6 157 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 ILVBLA1L0T0 632 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 TARSL2A2RTX5 802 aaKnown RBP16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 TMCO5BA8MYB1 307 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 SIN3BO75182 1162 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 LRIG2O94898 1065 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 CASP14P31944 242 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 MPLP40238 635 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 ZBTB16Q05516 673 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 SULT2A1Q06520 285 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 RNF219Q5W0B1 726 aaPredicted RBP16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 LRRC31Q6UY01 552 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 PRR23CQ6ZRP0 262 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 LPCAT2Q7L5N7 544 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 VSTM4Q8IW00 320 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 CCDC117Q8IWD4 279 aaPredicted RBP16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 FNIP1Q8TF40 1166 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 CPLX3Q8WVH0 158 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 RMDN1Q96DB5 314 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 SPACA7Q96KW9 195 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 RPL10LQ96L21 214 aaKnown RBP16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 DNAJC7Q99615 494 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 RXFP3Q9NSD7 469 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 NDFIP2Q9NV92 336 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 CYP8B1Q9UNU6 501 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 HS3ST2Q9Y278 367 aa16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.55■□□□□ 0.24
SCAMP4-205ENST00000452128 A0A087X0T9 212 aa16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 ATMINO43313 823 aaPredicted RBP16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 SRGAP2O75044 1071 aa16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 MOCS3O95396 460 aa16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 CD160O95971 181 aa16.54■□□□□ 0.24
SCAMP4-205ENST00000452128 MT-CO1P00395 513 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms