RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 HNRNPH3P31942 346 aaKnown RBP22.33■■□□□ 1.17
C9orf3-208ENST00000451893 GRIK2Q13002 908 aa22.33■■□□□ 1.17
C9orf3-208ENST00000451893 MTA1Q13330 715 aa22.33■■□□□ 1.17
C9orf3-208ENST00000451893 TAF5Q15542 800 aa22.33■■□□□ 1.17
C9orf3-208ENST00000451893 TTC39BQ5VTQ0 682 aaPredicted RBP22.33■■□□□ 1.17
C9orf3-208ENST00000451893 SND1Q7KZF4 910 aaKnown RBP eCLIP22.33■■□□□ 1.17
C9orf3-208ENST00000451893 SLC47A2Q86VL8 602 aa22.33■■□□□ 1.17
C9orf3-208ENST00000451893 TTC17Q96AE7 1141 aa22.33■■□□□ 1.17
C9orf3-208ENST00000451893 PCED1AQ9H1Q7 454 aa22.33■■□□□ 1.17
C9orf3-208ENST00000451893 FAM47DPA6NHR8 397 aa22.32■■□□□ 1.16
C9orf3-208ENST00000451893 FOXN3O00409 490 aaPredicted RBP22.32■■□□□ 1.16
C9orf3-208ENST00000451893 CCP110O43303 1012 aa22.32■■□□□ 1.16
C9orf3-208ENST00000451893 FSBPO95073 299 aa22.32■■□□□ 1.16
C9orf3-208ENST00000451893 IGLV3-19P01714 112 aa22.32■■□□□ 1.16
C9orf3-208ENST00000451893 SRPRAP08240 638 aaKnown RBP22.32■■□□□ 1.16
C9orf3-208ENST00000451893 PNMA6AP0CW24 399 aaPredicted RBP22.32■■□□□ 1.16
C9orf3-208ENST00000451893 OXCT1P55809 520 aa22.32■■□□□ 1.16
C9orf3-208ENST00000451893 RNASE9P60153 205 aaKnown RBP22.32■■□□□ 1.16
C9orf3-208ENST00000451893 RPS14P62263 151 aaKnown RBP22.32■■□□□ 1.16
C9orf3-208ENST00000451893 SIM1P81133 766 aaPredicted RBP22.32■■□□□ 1.16
C9orf3-208ENST00000451893 ECT2LQ008S8 904 aa22.32■■□□□ 1.16
C9orf3-208ENST00000451893 TEAD4Q15561 434 aa22.32■■□□□ 1.16
C9orf3-208ENST00000451893 MMS22LQ6ZRQ5 1243 aa22.32■■□□□ 1.16
C9orf3-208ENST00000451893 ADAT2Q7Z6V5 191 aaKnown RBP22.32■■□□□ 1.16
C9orf3-208ENST00000451893 TMEM35BQ8NCS4 154 aa22.32■■□□□ 1.16
C9orf3-208ENST00000451893 DNASE2BQ8WZ79 361 aa22.32■■□□□ 1.16
C9orf3-208ENST00000451893 RPRD1AQ96P16 312 aaPredicted RBP22.32■■□□□ 1.16
C9orf3-208ENST00000451893 SGK2Q9HBY8 427 aa22.32■■□□□ 1.16
C9orf3-208ENST00000451893 FAM207AQ9NSI2 230 aaPredicted RBP22.32■■□□□ 1.16
C9orf3-208ENST00000451893 STAP1Q9ULZ2 295 aa22.32■■□□□ 1.16
C9orf3-208ENST00000451893 SCML1Q9UN30 329 aa22.32■■□□□ 1.16
C9orf3-208ENST00000451893 ERVW-1Q9UQF0 538 aa22.32■■□□□ 1.16
C9orf3-208ENST00000451893 PCDH15Q96QU1 1955 aa22.32■■□□□ 1.16
C9orf3-208ENST00000451893 LAMA1P25391 3075 aa22.31■■□□□ 1.16
C9orf3-208ENST00000451893 SIN3BO75182 1162 aa22.31■■□□□ 1.16
C9orf3-208ENST00000451893 DAB1O75553 588 aa22.31■■□□□ 1.16
C9orf3-208ENST00000451893 CER1O95813 267 aa22.31■■□□□ 1.16
C9orf3-208ENST00000451893 ACSL1P33121 698 aa22.31■■□□□ 1.16
C9orf3-208ENST00000451893 PITX1P78337 314 aaPredicted RBP22.31■■□□□ 1.16
C9orf3-208ENST00000451893 SHC2P98077 582 aa22.31■■□□□ 1.16
C9orf3-208ENST00000451893 SLC6A3Q01959 620 aa22.31■■□□□ 1.16
C9orf3-208ENST00000451893 SEMA3BQ13214 749 aa22.31■■□□□ 1.16
C9orf3-208ENST00000451893 HNRNPDQ14103 355 aaKnown RBP22.31■■□□□ 1.16
C9orf3-208ENST00000451893 DRAP1Q14919 205 aaPredicted RBP22.31■■□□□ 1.16
C9orf3-208ENST00000451893 FSCBQ5H9T9 825 aa22.31■■□□□ 1.16
C9orf3-208ENST00000451893 KLHDC7AQ5VTJ3 777 aa22.31■■□□□ 1.16
C9orf3-208ENST00000451893 SMYD5Q6GMV2 418 aa22.31■■□□□ 1.16
C9orf3-208ENST00000451893 IL27RAQ6UWB1 636 aa22.31■■□□□ 1.16
C9orf3-208ENST00000451893 ZDHHC17Q8IUH5 632 aa22.31■■□□□ 1.16
C9orf3-208ENST00000451893 TMEM139Q8IV31 216 aa22.31■■□□□ 1.16
C9orf3-208ENST00000451893 MYEOVQ96EZ4 313 aa22.31■■□□□ 1.16
C9orf3-208ENST00000451893 SLC2A13Q96QE2 648 aa22.31■■□□□ 1.16
C9orf3-208ENST00000451893 OMDQ99983 421 aa22.31■■□□□ 1.16
C9orf3-208ENST00000451893 SIX2Q9NPC8 291 aa22.31■■□□□ 1.16
C9orf3-208ENST00000451893 AJAP1Q9UKB5 411 aaPredicted RBP22.31■■□□□ 1.16
C9orf3-208ENST00000451893 NUMA1Q14980 2115 aa22.3■■□□□ 1.16
C9orf3-208ENST00000451893 EDDM13A0A1B0GTR0 161 aa22.3■■□□□ 1.16
C9orf3-208ENST00000451893 A0A1B0GVM2 712 aa22.3■■□□□ 1.16
C9orf3-208ENST00000451893 TCAF2A6NFQ2 919 aa22.3■■□□□ 1.16
C9orf3-208ENST00000451893 M0QYT0 321 aa22.3■■□□□ 1.16
C9orf3-208ENST00000451893 ERBB2P04626 1255 aa22.3■■□□□ 1.16
C9orf3-208ENST00000451893 PDGFRAP16234 1089 aa22.3■■□□□ 1.16
C9orf3-208ENST00000451893 MATKP42679 507 aa22.3■■□□□ 1.16
C9orf3-208ENST00000451893 NUMBP49757 651 aa22.3■■□□□ 1.16
C9orf3-208ENST00000451893 KLK7P49862 253 aa22.3■■□□□ 1.16
C9orf3-208ENST00000451893 SULT2A1Q06520 285 aa22.3■■□□□ 1.16
C9orf3-208ENST00000451893 SLC14A1Q13336 389 aa22.3■■□□□ 1.16
C9orf3-208ENST00000451893 SLC12A1Q13621 1099 aa22.3■■□□□ 1.16
C9orf3-208ENST00000451893 HNRNPA1L2Q32P51 320 aaKnown RBP22.3■■□□□ 1.16
C9orf3-208ENST00000451893 TAF3Q5VWG9 929 aa22.3■■□□□ 1.16
C9orf3-208ENST00000451893 CIR1Q86X95 450 aaPredicted RBP22.3■■□□□ 1.16
C9orf3-208ENST00000451893 CCAR2Q8N163 923 aaKnown RBP22.3■■□□□ 1.16
C9orf3-208ENST00000451893 WDTC1Q8N5D0 677 aa22.3■■□□□ 1.16
C9orf3-208ENST00000451893 RPL10LQ96L21 214 aaKnown RBP22.3■■□□□ 1.16
C9orf3-208ENST00000451893 MTG2Q9H4K7 406 aa22.3■■□□□ 1.16
C9orf3-208ENST00000451893 C6orf106Q9H6K1 298 aaPredicted RBP22.3■■□□□ 1.16
C9orf3-208ENST00000451893 DNAAF2Q9NVR5 837 aaKnown RBP22.3■■□□□ 1.16
C9orf3-208ENST00000451893 FBXL12Q9NXK8 326 aa22.3■■□□□ 1.16
C9orf3-208ENST00000451893 SLC25A13Q9UJS0 675 aa22.3■■□□□ 1.16
C9orf3-208ENST00000451893 PYCARDQ9ULZ3 195 aa22.3■■□□□ 1.16
C9orf3-208ENST00000451893 PAXBP1Q9Y5B6 917 aa22.3■■□□□ 1.16
C9orf3-208ENST00000451893 SPAARA0A1B0GVQ0 90 aa22.29■■□□□ 1.16
C9orf3-208ENST00000451893 IGLV3-25P01717 112 aa22.29■■□□□ 1.16
C9orf3-208ENST00000451893 NOS2P35228 1153 aa22.29■■□□□ 1.16
C9orf3-208ENST00000451893 CLCN1P35523 988 aa22.29■■□□□ 1.16
C9orf3-208ENST00000451893 SULT1E1P49888 294 aa22.29■■□□□ 1.16
C9orf3-208ENST00000451893 AFF3P51826 1226 aaKnown RBP22.29■■□□□ 1.16
C9orf3-208ENST00000451893 PTPN20Q4JDL3 420 aa22.29■■□□□ 1.16
C9orf3-208ENST00000451893 OLFML1Q6UWY5 402 aa22.29■■□□□ 1.16
C9orf3-208ENST00000451893 FAM71AQ8IYT1 594 aa22.29■■□□□ 1.16
C9orf3-208ENST00000451893 KDM1BQ8NB78 822 aa22.29■■□□□ 1.16
C9orf3-208ENST00000451893 SIK2Q9H0K1 926 aa22.29■■□□□ 1.16
C9orf3-208ENST00000451893 RSPH9Q9H1X1 276 aaPredicted RBP22.29■■□□□ 1.16
C9orf3-208ENST00000451893 GANQ9H2C0 597 aa22.29■■□□□ 1.16
C9orf3-208ENST00000451893 PABPC3Q9H361 631 aaKnown RBP22.29■■□□□ 1.16
C9orf3-208ENST00000451893 GAREM1Q9H706 876 aa22.29■■□□□ 1.16
C9orf3-208ENST00000451893 RRN3Q9NYV6 651 aa22.29■■□□□ 1.16
C9orf3-208ENST00000451893 INTS6Q9UL03 887 aaKnown RBP22.29■■□□□ 1.16
C9orf3-208ENST00000451893 VANGL2Q9ULK5 521 aa22.29■■□□□ 1.16
C9orf3-208ENST00000451893 FHOD1Q9Y613 1164 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms